The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021171	Bacillus sp. 1NLA3E, complete sequence	4815602	221385	272511	4815602	tRNA,protease,portal,integrase,capsid,terminase	Bacillus_phage(26.67%)	67	225635:225653	268672:268690
WP_015592041.1|221385_221838_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_015592042.1|221837_222539_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_015592043.1|222559_223009_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_015592044.1|223005_224028_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.8	1.2e-67
WP_015592045.1|224929_226855_-	ABC-F type ribosomal protection protein	NA	A0A2K9L3Z8	Tupanvirus	33.0	7.8e-60
225635:225653	attL	TGATGTTAATTCAGCTTGT	NA	NA	NA	NA
WP_015592046.1|226999_227494_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_015592047.1|227519_228173_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_187292133.1|228810_230262_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_015592049.1|230472_232197_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	25.3	9.9e-22
WP_051120187.1|232268_232838_+	cytochrome c3 family protein	NA	NA	NA	NA	NA
WP_015592051.1|233156_233402_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_015592052.1|233568_234321_+	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
WP_015592053.1|234519_234723_-	YdiK family protein	NA	NA	NA	NA	NA
WP_015592054.1|234719_235451_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_015592055.1|235744_236032_+	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	51.6	5.5e-18
WP_015592056.1|236093_237728_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.2	1.3e-156
WP_015592057.1|237808_239029_-|integrase	site-specific integrase	integrase	A0A0C5AN64	Paenibacillus_phage	42.9	2.2e-76
WP_015592058.1|239044_239695_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	43.8	4.1e-29
WP_015592059.1|239901_240972_-	HigA family addiction module antidote protein	NA	NA	NA	NA	NA
WP_041580211.1|240987_241302_-	plasmid maintenance system killer protein	NA	NA	NA	NA	NA
WP_015592061.1|241421_242228_+	sce7726 family protein	NA	NA	NA	NA	NA
WP_015592062.1|242233_243331_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015592063.1|243494_243845_-	helix-turn-helix transcriptional regulator	NA	O64078	Bacillus_phage	45.3	1.9e-12
WP_015592064.1|244009_244255_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015592065.1|244267_244576_+	hypothetical protein	NA	A0A2H4JDL0	uncultured_Caudovirales_phage	45.3	4.5e-10
WP_015592066.1|244630_245161_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592067.1|245157_245340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041580212.1|245327_245525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_187292134.1|245543_245696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592068.1|245775_245970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592069.1|245944_247930_+	AAA family ATPase	NA	A0A1L2K2K3	Aeribacillus_phage	59.3	3.0e-216
WP_015592070.1|247929_248889_+	recombinase RecT	NA	NA	NA	NA	NA
WP_015592071.1|248888_249590_+	MBL fold metallo-hydrolase	NA	A0A1L2JY21	Aeribacillus_phage	73.8	5.7e-101
WP_015592072.1|249613_250567_+	replication protein	NA	W8EKA2	Geobacillus_phage	50.5	7.1e-62
WP_051120109.1|250490_251363_+	ATP-binding protein	NA	S6B1M2	Thermus_phage	65.7	6.8e-104
WP_015592074.1|251355_251595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592075.1|251597_251825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592076.1|251837_252185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_187292135.1|252181_252325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144061535.1|252533_253016_+	DUF1064 domain-containing protein	NA	A0A2P1JTY5	Anoxybacillus_phage	74.0	1.1e-50
WP_187292136.1|253725_253893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187292137.1|254321_254495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041580213.1|254674_255052_-	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	31.5	2.0e-07
WP_015592080.1|255305_255557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592081.1|255623_255824_+	XtrA/YqaO family protein	NA	A0A1L2JY31	Aeribacillus_phage	69.7	4.5e-19
WP_015592082.1|255820_256558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041580214.1|256860_257385_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0S2MVE1	Bacillus_phage	37.2	2.8e-20
WP_015592084.1|257424_257862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041580215.1|257989_258181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015592085.1|258325_258580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592086.1|258660_259392_+	hypothetical protein	NA	A0A1L2JY44	Aeribacillus_phage	64.7	4.0e-73
WP_144061537.1|259397_260714_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2P1JTW5	Anoxybacillus_phage	60.6	4.9e-146
WP_015592088.1|260717_262241_+|portal	phage portal protein	portal	A0A1B1P7C8	Bacillus_phage	51.1	9.0e-144
WP_015592089.1|262237_263140_+	hypothetical protein	NA	A0A249XXB6	Clostridium_phage	39.5	6.1e-47
WP_015592090.1|263190_263421_+	hypothetical protein	NA	A0A2H4J182	uncultured_Caudovirales_phage	41.7	3.2e-05
WP_015592091.1|263442_264630_+|terminase	terminase	terminase	A0A1B1P7E4	Bacillus_phage	54.2	3.3e-85
WP_015592092.1|264659_265604_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_015592093.1|265616_265922_+	hypothetical protein	NA	A0A1B1P7E2	Bacillus_phage	46.6	3.3e-05
WP_015592094.1|265921_266329_+	DUF3199 family protein	NA	A0A1B1P7D6	Bacillus_phage	45.2	6.3e-20
WP_015592095.1|266328_266673_+	YqbH/XkdH family protein	NA	NA	NA	NA	NA
WP_041580833.1|266681_267215_+	HK97 gp10 family phage protein	NA	A0A249XXA4	Clostridium_phage	52.4	4.0e-46
WP_187292138.1|267618_267789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592098.1|267793_268201_+	antigen A	NA	A0A0K1LLF6	Bacillus_phage	52.3	2.1e-31
WP_041580834.1|268259_268592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015592099.1|268609_269005_+	hypothetical protein	NA	W8EEV4	Geobacillus_phage	63.4	1.5e-37
268672:268690	attR	TGATGTTAATTCAGCTTGT	NA	NA	NA	NA
WP_015592100.1|269022_269307_+	hypothetical protein	NA	A0A0K1LMC7	Bacillus_phage	65.6	3.7e-19
WP_015592101.1|269307_272511_+	phage protein	NA	W8EBC4	Geobacillus_phage	54.0	7.4e-63
>prophage 2
NC_021171	Bacillus sp. 1NLA3E, complete sequence	4815602	346610	356572	4815602		Synechococcus_phage(50.0%)	9	NA	NA
WP_015592159.1|346610_347903_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	26.3	1.2e-19
WP_015592160.1|348052_348766_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3HI61	Synechococcus_phage	45.9	7.4e-48
WP_015592161.1|348758_349013_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	A0A0E3FJ99	Synechococcus_phage	36.7	1.6e-05
WP_015592162.1|349009_349693_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_015592163.1|349676_351896_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	42.0	1.2e-160
WP_015592164.1|351880_353293_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	30.4	7.0e-50
WP_015592165.1|353416_354442_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	44.9	3.9e-66
WP_015592166.1|354452_355037_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.7	8.0e-24
WP_015592167.1|355033_356572_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	52.3	6.2e-76
>prophage 3
NC_021171	Bacillus sp. 1NLA3E, complete sequence	4815602	3583108	3644239	4815602	transposase,protease,coat,tRNA	uncultured_Mediterranean_phage(14.29%)	59	NA	NA
WP_015595104.1|3583108_3584248_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.5	1.4e-85
WP_015595105.1|3584273_3585302_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_015595106.1|3585346_3586348_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	31.1	8.1e-08
WP_015595107.1|3586432_3587041_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_015595108.1|3587197_3587725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015595109.1|3587768_3588287_-	intercompartmental signaling factor BofC	NA	NA	NA	NA	NA
WP_015595110.1|3588615_3589362_-	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA	NA
WP_015595111.1|3589450_3590191_-	NAD(+) synthase	NA	E3SLH5	Synechococcus_phage	36.7	1.2e-32
WP_144061606.1|3590227_3591211_-	phosphotransferase	NA	NA	NA	NA	NA
WP_015595113.1|3591194_3592817_-|coat	SafA/ExsA family spore coat assembly protein	coat	NA	NA	NA	NA
WP_015595114.1|3593023_3593560_+	transcription repressor NadR	NA	NA	NA	NA	NA
WP_015595115.1|3593890_3594742_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_015595116.1|3594792_3595248_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_015595117.1|3595273_3596569_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_015595118.1|3596645_3597188_-	sporulation initiation phosphotransferase B	NA	NA	NA	NA	NA
WP_015595119.1|3597585_3597876_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_015595120.1|3597888_3598221_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_015595121.1|3598232_3598541_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_015595122.1|3598927_3600403_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_015595123.1|3600432_3601299_-	M50 family metallopeptidase	NA	NA	NA	NA	NA
WP_015595124.1|3601291_3602065_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_015595125.1|3602274_3603078_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_015595126.1|3603079_3603760_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_015595127.1|3603857_3604376_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_015595128.1|3604372_3605257_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_015595129.1|3605370_3606393_-	rod shape-determining protein	NA	NA	NA	NA	NA
WP_187292196.1|3606552_3607224_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_015595131.1|3607290_3607863_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_015595132.1|3608064_3609207_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_015595133.1|3609379_3610156_-	pilus assembly protein PilO	NA	NA	NA	NA	NA
WP_015595134.1|3610152_3610791_-	DUF3185 family protein	NA	NA	NA	NA	NA
WP_015595135.1|3610793_3611786_-	pilus assembly protein PilM	NA	NA	NA	NA	NA
WP_041580643.1|3611803_3612553_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_015595137.1|3612578_3613007_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_015595138.1|3613113_3614325_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_015595139.1|3614326_3615367_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_015595140.1|3615379_3617041_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA	NA
WP_041580644.1|3617066_3618386_-	VanW family protein	NA	NA	NA	NA	NA
WP_015595142.1|3618445_3619738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041580646.1|3619993_3621334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015595144.1|3621343_3621781_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_041580648.1|3621765_3622212_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_015595146.1|3622446_3623751_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_015595147.1|3623964_3626610_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.1	7.8e-159
WP_083935128.1|3627144_3627339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015595148.1|3627480_3628533_-|coat	spore coat protein YsxE	coat	NA	NA	NA	NA
WP_015595149.1|3628612_3629854_-	stage VI sporulation protein D	NA	NA	NA	NA	NA
WP_015595150.1|3629982_3631272_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	A0A1V0SKB7	Klosneuvirus	26.1	4.2e-09
WP_015595151.1|3631308_3632289_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_015595152.1|3632308_3633085_-	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_015595153.1|3633081_3634017_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_015595154.1|3634032_3634866_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_015595155.1|3634880_3636230_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_015595156.1|3636584_3637067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015595157.1|3637505_3637763_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_015595158.1|3638068_3638653_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_015595159.1|3638639_3640973_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	44.6	4.4e-182
WP_015595160.1|3641137_3642805_-|protease	ATP-dependent protease LonB	protease	NA	NA	NA	NA
WP_015595161.1|3642970_3644239_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	65.6	1.1e-147
