The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_016787	Corynebacterium diphtheriae HC03, complete sequence	2478364	644266	700493	2478364	transposase,protease,tRNA	Bacillus_phage(25.0%)	47	NA	NA
WP_014303067.1|644266_644770_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_014308081.1|644815_645439_+	sigma-70 family RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	28.5	2.2e-08
WP_004567129.1|645435_645687_+	mycothiol system anti-sigma-R factor	NA	NA	NA	NA	NA
WP_014308082.1|645691_646036_-	DUF4288 domain-containing protein	NA	NA	NA	NA	NA
WP_004567132.1|646376_646637_-	WhiB family transcriptional regulator	NA	A0A2P1N2X5	Mycobacterium_phage	45.1	2.0e-11
WP_044035402.1|647340_647730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014308084.1|647723_648986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014301548.1|648982_650293_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	30.0	1.3e-42
WP_004567139.1|650509_650737_+	DUF3107 domain-containing protein	NA	NA	NA	NA	NA
WP_014308085.1|650739_651618_+	DUF3152 domain-containing protein	NA	NA	NA	NA	NA
WP_014308086.1|651640_652498_+	TIGR02569 family protein	NA	NA	NA	NA	NA
WP_014308087.1|652501_655684_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_014308088.1|655677_658908_+	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	22.9	5.1e-19
WP_004567149.1|658952_660041_+	potassium channel protein	NA	NA	NA	NA	NA
WP_014308089.1|660072_660756_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_014308090.1|660748_662800_+	ATP-dependent DNA helicase UvrD2	NA	S5MMD7	Bacillus_phage	27.6	4.4e-45
WP_014306618.1|662744_663638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014308091.1|663673_664195_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_014308092.1|664191_665583_-|protease	zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_044035360.1|665663_666716_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_014308094.1|666727_667426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014303079.1|667476_667980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014308095.1|668151_671115_+	UPF0182 family protein	NA	NA	NA	NA	NA
WP_010934516.1|671598_672168_-	sodium:glutamate symporter	NA	NA	NA	NA	NA
WP_014308096.1|672697_673708_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_014308097.1|673710_674667_-	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_014306629.1|674922_675090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010934521.1|675345_676827_+	methylmalonyl-CoA carboxytransferase subunit 5S	NA	NA	NA	NA	NA
WP_010934522.1|676839_678396_+	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA	NA
WP_003850577.1|678409_678673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003850583.1|678697_679066_+	biotin/lipoyl-binding protein	NA	NA	NA	NA	NA
WP_014306632.1|679268_680360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014308098.1|680378_681167_-	histidinol-phosphatase	NA	NA	NA	NA	NA
WP_014308099.1|681223_682039_-	inositol monophosphatase family protein	NA	NA	NA	NA	NA
WP_014308100.1|682218_683328_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_014303094.1|685106_685796_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.1e-27
WP_003850598.1|685812_686715_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003850600.1|686819_687311_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	52.2	1.5e-36
WP_014308103.1|689388_692322_+	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA	NA
WP_010934533.1|694440_695319_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.4	6.6e-30
WP_010934534.1|695318_696116_+	lantibiotic ABC transporter permease	NA	NA	NA	NA	NA
WP_010934535.1|696281_696548_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013170013.1|697582_697864_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_044026255.1|697936_698740_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_010934538.1|698962_699304_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010934539.1|699337_700141_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_014308107.1|700262_700493_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_016787	Corynebacterium diphtheriae HC03, complete sequence	2478364	1761732	1809871	2478364	transposase,protease,tRNA	Streptococcus_phage(16.67%)	43	NA	NA
WP_014308372.1|1761732_1763082_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	36.1	5.2e-34
WP_045143595.1|1763124_1765716_+	class I SAM-dependent DNA methyltransferase	NA	Q6NE04	Leptospira_phage	36.8	8.4e-158
WP_014308585.1|1765712_1766633_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_014308587.1|1767126_1767963_-	Abi family protein	NA	A3QSC6	Clostridium_virus	29.3	2.5e-23
WP_003852416.1|1768262_1770110_-	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	37.7	4.9e-19
WP_014302216.1|1770217_1770382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010935319.1|1770388_1770946_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_003852425.1|1771106_1771370_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_044035373.1|1771418_1772057_-	LysE family transporter	NA	NA	NA	NA	NA
WP_044035374.1|1772046_1772448_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_014308590.1|1772458_1773433_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_014308591.1|1773386_1775060_-	ComEC/Rec2 family competence protein	NA	NA	NA	NA	NA
WP_014308592.1|1775056_1775674_-	ComEA family DNA-binding protein	NA	NA	NA	NA	NA
WP_014308593.1|1775792_1776614_-	DegV family protein	NA	NA	NA	NA	NA
WP_014307180.1|1776618_1777341_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_003852440.1|1777347_1777815_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_014308594.1|1777837_1778524_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_014308595.1|1778547_1779834_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.3	8.3e-82
WP_014308596.1|1779857_1780988_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	1.6e-57
WP_014308597.1|1781008_1781260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003852449.1|1781263_1782790_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_003852453.1|1782950_1783217_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003852455.1|1783257_1783563_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_014308598.1|1783737_1786626_-	translation initiation factor IF-2 N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_014307184.1|1786906_1787317_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	46.2	1.1e-27
WP_148263398.1|1787721_1787940_+	Lsr2 family protein	NA	NA	NA	NA	NA
WP_014308601.1|1788834_1789839_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_014308602.1|1789832_1791059_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_014308603.1|1791071_1792202_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA	NA
WP_050804394.1|1792201_1792540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014308604.1|1792540_1793698_+	MFS transporter	NA	NA	NA	NA	NA
WP_044035361.1|1794406_1794643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014308109.1|1794730_1794895_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_050804400.1|1795373_1796777_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.4	1.2e-28
WP_014308107.1|1796841_1797072_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014308609.1|1798225_1798639_-	DUF4233 domain-containing protein	NA	NA	NA	NA	NA
WP_014308610.1|1798635_1800132_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_014309472.1|1800128_1802837_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	37.4	2.1e-135
WP_014308612.1|1802931_1803912_-	malate dehydrogenase	NA	NA	NA	NA	NA
WP_014303750.1|1804394_1805147_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010935337.1|1805182_1806475_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.2	3.3e-131
WP_014308613.1|1806621_1809147_-	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	30.3	2.8e-65
WP_014307190.1|1809241_1809871_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	43.5	6.1e-38
>prophage 3
NC_016787	Corynebacterium diphtheriae HC03, complete sequence	2478364	2245028	2288612	2478364	integrase,transposase,holin,tRNA	Macacine_betaherpesvirus(28.57%)	33	2234447:2234461	2292833:2292847
2234447:2234461	attL	AAGCCTATGGGTATT	NA	NA	NA	NA
WP_014307479.1|2245028_2245808_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_014302497.1|2245804_2246425_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_014308847.1|2246439_2248680_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_014308848.1|2248681_2249725_+	UPF0104 family protein	NA	NA	NA	NA	NA
WP_014302500.1|2249721_2250078_+	DUF3054 domain-containing protein	NA	NA	NA	NA	NA
WP_004567314.1|2250236_2250437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014308849.1|2250603_2250855_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_004567317.1|2251269_2254269_-	VaFE repeat-containing surface-anchored protein	NA	NA	NA	NA	NA
WP_014308850.1|2254686_2255121_-	endo-beta-N-acetylglucosaminidase	NA	NA	NA	NA	NA
WP_014308851.1|2255273_2255690_-	endo-beta-N-acetylglucosaminidase F2	NA	NA	NA	NA	NA
WP_004567323.1|2257406_2262167_-	acyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_004567325.1|2262265_2264080_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_004567333.1|2264154_2265066_-	cutinase family protein	NA	NA	NA	NA	NA
WP_004567335.1|2265071_2265587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014308854.1|2265586_2267503_-	hypothetical protein	NA	A0A2I6B2Q9	Macacine_betaherpesvirus	37.6	4.9e-38
WP_004567341.1|2267863_2268880_-	esterase family protein	NA	A0A2I6AZZ6	Macacine_betaherpesvirus	35.1	5.4e-36
WP_014308855.1|2269046_2270735_-	arabinofuranosyl transferase C	NA	NA	NA	NA	NA
WP_014308856.1|2270743_2271721_-	decaprenyl-phosphate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_004567346.1|2271717_2272212_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_014308857.1|2272211_2274197_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_044035417.1|2274281_2274767_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_014308859.1|2274837_2276415_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_014308860.1|2276481_2278707_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	25.9	3.3e-17
WP_014308861.1|2278978_2280772_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	29.8	3.5e-54
WP_014308862.1|2280957_2282121_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	45.8	6.5e-94
WP_014308865.1|2282928_2283771_-	type IV toxin-antitoxin system AbiEi family antitoxin	NA	NA	NA	NA	NA
WP_014308867.1|2284015_2284291_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_014308868.1|2284761_2286582_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A159B6I5	Gordonia_phage	34.8	8.9e-05
WP_004567362.1|2286821_2287055_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_014308869.1|2287364_2287487_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_080564351.1|2287869_2288049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014308870.1|2288014_2288356_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	Q8W6R2	Burkholderia_virus	42.0	8.8e-07
WP_158307782.1|2288336_2288612_+|transposase	transposase	transposase	NA	NA	NA	NA
2292833:2292847	attR	AAGCCTATGGGTATT	NA	NA	NA	NA
