assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000240075.2_ASM24007v2	NC_016510	Flavobacterium columnare ATCC 49512, complete sequence	1	391564-394476	1,1,2,1	CRISPRCasFinder,CRT,CRT,PILER-CR	no	cas9,cas1	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	Type II-B, or Type II-C?, Type II-B,Type II-C,Type II-A	GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT,GTTGTGGTTTGATTAAAGATTAGAAAACACGATATTA,GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT,GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT	36,37,36,36	9	9	391600-391629|391666-391695|392504-392532|392832-392861|392964-392993|393688-393717|393754-393783|391601-391629|391667-391695	NC_016510.2_1266943-1266914|NC_016510.2_1240142-1240171|NC_016510.2_1266595-1266623|NC_016510.2_1264958-1264987|NC_016510.2_1260638-1260609|NC_016510.2_1245659-1245630|NC_016510.2_1243967-1243996|NC_016510.2_1266942-1266914|NC_016510.2_1240143-1240171	NA:NA:NA:NA	43,42,42,26	43	TypeII-B,orTypeII-C?,TypeII-B,TypeII-C,TypeII-A	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	NA|53aa|up_8|NC_016510.2_383724_383883_+,NA|77aa|up_7|NC_016510.2_383884_384115_+,NA|72aa|up_5|NC_016510.2_384412_384628_+,NA|97aa|up_3|NC_016510.2_385204_385495_+,NA|81aa|up_1|NC_016510.2_390852_391095_+,NA|136aa|down_1|NC_016510.2_395890_396298_+	NA|223aa|up_9|NC_016510.2_382810_383479_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|53aa|up_8|NC_016510.2_383724_383883_+	NA	NA|77aa|up_7|NC_016510.2_383884_384115_+	NA	NA|97aa|up_6|NC_016510.2_384116_384407_+	PRK14369, PRK14369, membrane protein insertion efficiency factor YidD	NA|72aa|up_5|NC_016510.2_384412_384628_+	NA	NA|169aa|up_4|NC_016510.2_384693_385200_+	pfam08239, SH3_3, Bacterial SH3 domain	NA|97aa|up_3|NC_016510.2_385204_385495_+	NA	cas9|1536aa|up_2|NC_016510.2_385982_390590_+	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	NA|81aa|up_1|NC_016510.2_390852_391095_+	NA	NA|99aa|up_0|NC_016510.2_391087_391384_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	cas1|295aa|down_0|NC_016510.2_394903_395788_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	NA|136aa|down_1|NC_016510.2_395890_396298_+	NA	NA|327aa|down_2|NC_016510.2_396711_397692_+	pfam04443, LuxE, Acyl-protein synthetase, LuxE	NA|221aa|down_3|NC_016510.2_397777_398440_+	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE)	NA|361aa|down_4|NC_016510.2_398585_399668_-	pfam12725, DUF3810, Protein of unknown function (DUF3810)	NA|138aa|down_5|NC_016510.2_399677_400091_-	pfam04134, DUF393, Protein of unknown function, DUF393	NA|723aa|down_6|NC_016510.2_400108_402277_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|153aa|down_7|NC_016510.2_402373_402832_-	pfam01832, Glucosaminidase, Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA|415aa|down_8|NC_016510.2_402994_404239_+	cd01825, SGNH_hydrolase_peri1, SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases	NA|494aa|down_9|NC_016510.2_404755_406237_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]
GCF_000240075.2_ASM24007v2	NC_016510	Flavobacterium columnare ATCC 49512, complete sequence	2	1679967-1680625	2,2,3	PILER-CR,CRISPRCasFinder,CRT	no	cas13b	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	Type VI-B1,Type VI-B2	GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC,GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC,GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC	36,36,36	0	0	NA	NA	VI-B1:VI-B1:VI-B1	7,8,9	9	TypeVI-B1,TypeVI-B2	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	NA|307aa|up_7|NC_016510.2_1668708_1669629_+,NA|239aa|down_2|NC_016510.2_1683082_1683799_+,NA|165aa|down_4|NC_016510.2_1685405_1685900_+,NA|235aa|down_5|NC_016510.2_1685871_1686576_+,NA|227aa|down_9|NC_016510.2_1689833_1690514_-	NA|296aa|up_9|NC_016510.2_1665997_1666885_-	COG2962, RarD, Predicted permeases [General function prediction only]	NA|552aa|up_8|NC_016510.2_1666968_1668624_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|307aa|up_7|NC_016510.2_1668708_1669629_+	NA	NA|182aa|up_6|NC_016510.2_1669630_1670176_-	pfam01713, Smr, Smr domain	NA|92aa|up_5|NC_016510.2_1670258_1670534_+	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|415aa|up_4|NC_016510.2_1670681_1671926_-	TIGR01885, Ornithine_aminotransferase, ornithine aminotransferase	NA|479aa|up_3|NC_016510.2_1672202_1673639_+	COG3211, PhoX, Predicted phosphatase [General function prediction only]	NA|585aa|up_2|NC_016510.2_1673820_1675575_+	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism]	NA|179aa|up_1|NC_016510.2_1675607_1676144_-	pfam08002, DUF1697, Protein of unknown function (DUF1697)	cas13b|1180aa|up_0|NC_016510.2_1676290_1679830_+	cd20478, Cas13b_Bz-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Bergeyella zoohelcum and similar Cas13b proteins	NA|279aa|down_0|NC_016510.2_1680986_1681823_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|283aa|down_1|NC_016510.2_1681877_1682726_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|239aa|down_2|NC_016510.2_1683082_1683799_+	NA	NA|471aa|down_3|NC_016510.2_1683932_1685345_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|165aa|down_4|NC_016510.2_1685405_1685900_+	NA	NA|235aa|down_5|NC_016510.2_1685871_1686576_+	NA	NA|278aa|down_6|NC_016510.2_1686796_1687630_-	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only]	NA|114aa|down_7|NC_016510.2_1687710_1688052_-	pfam11015, DUF2853, Protein of unknown function (DUF2853)	NA|550aa|down_8|NC_016510.2_1688135_1689785_-	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	NA|227aa|down_9|NC_016510.2_1689833_1690514_-	NA
GCF_000240075.2_ASM24007v2	NC_016510	Flavobacterium columnare ATCC 49512, complete sequence	3	1699774-1699955	3	PILER-CR	no		cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	Orphan	AAAAGCAAAAAAACCAATAGAGGTAACGGAATTAGGAATGGTAACAGCGGTTAAACCT	58	0	0	NA	NA	NA	2	2	Orphan	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	NA|227aa|up_8|NC_016510.2_1689833_1690514_-,NA|83aa|up_0|NC_016510.2_1697571_1697820_-,NA|141aa|down_9|NC_016510.2_1715850_1716273_-	NA|550aa|up_9|NC_016510.2_1688135_1689785_-	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	NA|227aa|up_8|NC_016510.2_1689833_1690514_-	NA	NA|165aa|up_7|NC_016510.2_1690553_1691048_+	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|279aa|up_6|NC_016510.2_1691330_1692167_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|92aa|up_5|NC_016510.2_1692198_1692474_+	pfam02617, ClpS, ATP-dependent Clp protease adaptor protein ClpS	NA|422aa|up_4|NC_016510.2_1692589_1693855_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|220aa|up_3|NC_016510.2_1693864_1694524_+	pfam07947, YhhN, YhhN family	NA|140aa|up_2|NC_016510.2_1695173_1695593_-	PRK14545, PRK14545, nucleoside diphosphate kinase; Provisional	NA|529aa|up_1|NC_016510.2_1695679_1697266_-	pfam10079, BshC, Bacillithiol biosynthesis BshC	NA|83aa|up_0|NC_016510.2_1697571_1697820_-	NA	NA|731aa|down_0|NC_016510.2_1700820_1703013_+	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM	NA|600aa|down_1|NC_016510.2_1703421_1705221_-	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA	NA|84aa|down_2|NC_016510.2_1705438_1705690_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|493aa|down_3|NC_016510.2_1706245_1707724_-	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional	NA|366aa|down_4|NC_016510.2_1707822_1708920_+	cd16147, G6S, glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)	NA|511aa|down_5|NC_016510.2_1708984_1710517_+	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism]	NA|434aa|down_6|NC_016510.2_1710658_1711960_+	TIGR01125, Ribosomal_protein_S12_methylthiotransferase_RimO, ribosomal protein S12 methylthiotransferase RimO	NA|559aa|down_7|NC_016510.2_1713804_1715481_-	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin	NA|99aa|down_8|NC_016510.2_1715573_1715870_-	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|141aa|down_9|NC_016510.2_1715850_1716273_-	NA
GCF_000240075.2_ASM24007v2	NC_016510	Flavobacterium columnare ATCC 49512, complete sequence	4	1994455-1994554	3	CRISPRCasFinder	no	cas9	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	Type II-B, or Type II-C?, Type II-B,Type II-C,Type II-A	GTTGTAAATTGCTTTCAATTTTT	23	0	0	NA	NA	NA	1	1	TypeII-B,orTypeII-C?,TypeII-B,TypeII-C,TypeII-A	cas9,cas1,DEDDh,cas3,csa3,WYL,RT,cas13b,PD-DExK,DinG	NA|63aa|up_6|NC_016510.2_1988749_1988938_-,NA|245aa|up_3|NC_016510.2_1991483_1992218_-,NA|178aa|up_1|NC_016510.2_1992810_1993344_-,NA|161aa|down_2|NC_016510.2_2001101_2001584_-	NA|171aa|up_9|NC_016510.2_1985626_1986139_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|319aa|up_8|NC_016510.2_1986221_1987178_-	pfam18175, HU-CCDC81_bac_2, CCDC81-like prokaryotic HU domain 2	NA|367aa|up_7|NC_016510.2_1987386_1988487_+	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|63aa|up_6|NC_016510.2_1988749_1988938_-	NA	NA|363aa|up_5|NC_016510.2_1989052_1990141_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|427aa|up_4|NC_016510.2_1990210_1991491_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|245aa|up_3|NC_016510.2_1991483_1992218_-	NA	NA|131aa|up_2|NC_016510.2_1992310_1992703_-	COG3179, COG3179, Predicted chitinase [General function prediction only]	NA|178aa|up_1|NC_016510.2_1992810_1993344_-	NA	NA|132aa|up_0|NC_016510.2_1993599_1993995_-	pfam14107, DUF4280, Domain of unknown function (DUF4280)	cas9|1460aa|down_0|NC_016510.2_1995070_1999450_-	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	NA|494aa|down_1|NC_016510.2_1999620_2001102_-	pfam03321, GH3, GH3 auxin-responsive promoter	NA|161aa|down_2|NC_016510.2_2001101_2001584_-	NA	NA|60aa|down_3|NC_016510.2_2001732_2001912_+	PRK00575, tatA, Sec-independent protein translocase subunit TatA	NA|154aa|down_4|NC_016510.2_2001935_2002397_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|437aa|down_5|NC_016510.2_2002393_2003704_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|365aa|down_6|NC_016510.2_2003675_2004770_-	cd05651, M20_ArgE_DapE-like, M20 peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases	NA|258aa|down_7|NC_016510.2_2004773_2005547_-	cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like 	NA|316aa|down_8|NC_016510.2_2005550_2006498_-	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed	NA|375aa|down_9|NC_016510.2_2006532_2007657_-	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional
