The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_016811	Legionella pneumophila subsp. pneumophila ATCC 43290, complete sequence	3359001	872826	923594	3359001	tRNA,protease,transposase	Pseudomonas_phage(20.0%)	42	NA	NA
WP_027225284.1|872826_874122_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_016356774.1|874430_874967_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_016356994.1|875353_876520_+	DUF1574 family protein	NA	NA	NA	NA	NA
WP_014326777.1|876516_877959_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	40.5	5.1e-72
WP_016356993.1|877955_879413_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_011945918.1|879529_880906_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_011214989.1|881110_881812_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_011945919.1|881977_883225_+	MFS transporter	NA	NA	NA	NA	NA
WP_010946534.1|883610_883997_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
WP_010946535.1|884100_885444_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_010946536.1|885518_887168_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_010946537.1|887164_888535_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	49.7	2.2e-112
WP_010946538.1|888687_890391_+	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	26.5	6.5e-42
WP_010946539.1|890593_892297_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_014326783.1|892526_893525_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_013101200.1|893749_896137_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	38.2	3.1e-175
WP_010946542.1|896377_897817_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_013101201.1|897813_898656_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_013101202.1|898652_899744_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_010946545.1|899718_901134_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_011945930.1|901225_901543_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_044008899.1|901738_902776_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_010946548.1|902753_903662_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_010946549.1|903658_904138_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_011213321.1|904073_904676_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_011945934.1|904936_905635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011945935.1|905747_907004_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	74.1	1.9e-14
WP_011215007.1|907405_907741_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	36.5	5.8e-11
WP_011945936.1|907772_910040_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	1.9e-166
WP_011945937.1|910263_911043_+	glycosyltransferase family 2 protein	NA	S5WBE2	Pseudomonas_phage	30.1	1.2e-06
WP_013101205.1|911045_912296_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_014326787.1|912296_912671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011945940.1|912801_913398_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_016356778.1|913394_914297_-	M23 family metallopeptidase	NA	A8ATH6	Listeria_phage	40.5	1.0e-14
WP_014326789.1|914305_915637_-	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	35.2	4.2e-36
WP_014326790.1|915786_917511_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_014326791.1|917461_918196_+	transglutaminase-like cysteine peptidase	NA	NA	NA	NA	NA
WP_014326792.1|918211_920131_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_014326793.1|920266_920992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016356780.1|920969_922310_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_027225283.1|922450_922819_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_014326795.1|922784_923594_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_016811	Legionella pneumophila subsp. pneumophila ATCC 43290, complete sequence	3359001	932509	939348	3359001		Acinetobacter_phage(42.86%)	9	NA	NA
WP_014326803.1|932509_933286_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	48.6	1.1e-57
WP_016356786.1|933290_934313_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.3	4.6e-75
WP_014326805.1|934290_934869_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.0e-55
WP_010946572.1|934902_935628_-	LPS export ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.4	3.1e-17
WP_014326806.1|935624_936134_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_014326807.1|936114_936684_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_011945955.1|936680_937208_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
WP_010946576.1|937221_938184_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
WP_011215026.1|938550_939348_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.8	1.7e-21
>prophage 3
NC_016811	Legionella pneumophila subsp. pneumophila ATCC 43290, complete sequence	3359001	1264577	1270514	3359001		Staphylococcus_phage(50.0%)	6	NA	NA
WP_010946911.1|1264577_1265651_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	27.8	2.8e-30
WP_010946912.1|1265635_1266250_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	38.4	3.5e-22
WP_010946913.1|1266246_1267455_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.7	5.4e-99
WP_010946914.1|1267462_1267930_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
WP_010946915.1|1268055_1269693_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.3	3.6e-154
WP_010946916.1|1269689_1270514_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 4
NC_016811	Legionella pneumophila subsp. pneumophila ATCC 43290, complete sequence	3359001	2174321	2184445	3359001		Bacillus_phage(16.67%)	7	NA	NA
WP_014326932.1|2174321_2176010_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	30.4	8.0e-16
WP_015444337.1|2176141_2177149_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010947737.1|2177272_2178598_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	1.4e-47
WP_010947738.1|2178616_2179765_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	58.5	1.3e-126
WP_015444336.1|2179973_2181086_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	2.9e-51
WP_010947740.1|2181181_2182321_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
WP_015444335.1|2182510_2184445_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
>prophage 5
NC_016811	Legionella pneumophila subsp. pneumophila ATCC 43290, complete sequence	3359001	2275693	2326779	3359001	integrase,transposase	Wolbachia_phage(22.22%)	54	2277424:2277473	2322905:2322954
WP_010947827.1|2275693_2276077_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947828.1|2276130_2277084_-	Abi family protein	NA	A3QSC6	Clostridium_virus	31.8	4.8e-34
2277424:2277473	attL	GGCTTCGAACCAAGGTGTCGGGGGTTCGAGTCCCTCCGAGCGCGCCATTT	NA	NA	NA	NA
WP_014326935.1|2277513_2278674_-|integrase	site-specific integrase	integrase	A0A059VF45	Pseudomonas_phage	45.8	1.5e-85
WP_014326936.1|2279008_2280013_-	DUF1016 family protein	NA	Q9JMP5	Wolbachia_phage	32.9	8.0e-48
WP_027220144.1|2280033_2280519_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_016356949.1|2280532_2281807_-	MFS transporter	NA	NA	NA	NA	NA
WP_014326939.1|2281784_2282297_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_016356950.1|2282338_2283022_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_016356951.1|2283048_2283852_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_027220146.1|2283935_2284175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011947213.1|2284526_2284922_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_014326944.1|2284936_2286844_-	cation-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	45.5	1.1e-143
WP_011947217.1|2287413_2287584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027220149.1|2287848_2289984_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.0	1.0e-145
WP_016356954.1|2290060_2293210_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_011947220.1|2293219_2294476_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011947221.1|2294472_2295717_-	TolC family protein	NA	NA	NA	NA	NA
WP_016356955.1|2295980_2296643_-	LexA family transcriptional regulator	NA	NA	NA	NA	NA
WP_016356956.1|2296827_2297700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027220151.1|2297662_2298028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011947232.1|2298047_2298245_+	carbon storage regulator	NA	NA	NA	NA	NA
WP_011947233.1|2298241_2298676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016356957.1|2298672_2299281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011947235.1|2299273_2300110_+	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_016356958.1|2300111_2300570_+	integrating conjugative element protein	NA	NA	NA	NA	NA
WP_016356959.1|2300560_2301259_+	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
WP_011947238.1|2301268_2301592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014843982.1|2301594_2301858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016356960.1|2301860_2302247_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015961513.1|2302255_2302606_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
WP_014326960.1|2302610_2303273_+	DUF2895 family protein	NA	NA	NA	NA	NA
WP_016356961.1|2303259_2304042_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_016356962.1|2304038_2305352_+	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_016356963.1|2305308_2305698_+	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA	NA
WP_016356964.1|2305708_2308483_+	conjugative transfer ATPase	NA	NA	NA	NA	NA
WP_016356965.1|2308457_2309453_+	TIGR03756 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_016356966.1|2309462_2310845_+	integrating conjugative element protein	NA	NA	NA	NA	NA
WP_016356967.1|2310846_2312415_+	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_027220156.1|2312417_2312627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027220157.1|2312640_2312973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014326970.1|2312976_2314983_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_016356968.1|2314984_2315470_+	DUF1845 family protein	NA	NA	NA	NA	NA
WP_025519966.1|2315554_2315764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014326973.1|2315910_2316879_-	DUF3644 domain-containing protein	NA	NA	NA	NA	NA
WP_016356969.1|2317537_2318341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016356970.1|2318333_2319233_+|integrase	integrase domain-containing protein	integrase	NA	NA	NA	NA
WP_014326976.1|2319568_2319829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016356971.1|2319891_2320398_+	antirestriction protein ArdA	NA	U5P3Z5	Mycobacterium_phage	39.5	4.2e-21
WP_014326978.1|2320499_2321117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016356972.1|2321149_2321641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014326980.1|2321651_2322470_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	47.1	1.4e-63
WP_015444229.1|2323074_2324493_+|transposase	IS4-like element ISLpn3 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.9	2.3e-56
2322905:2322954	attR	GGCTTCGAACCAAGGTGTCGGGGGTTCGAGTCCCTCCGAGCGCGCCATTT	NA	NA	NA	NA
WP_010947829.1|2324525_2325701_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	21.2	5.2e-14
WP_010947830.1|2325753_2326779_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
