assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000233775.1_ASM23377v1	NC_016148	Thermovirga lienii DSM 17291, complete sequence	1	256316-257821	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	csm6,WYL,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cas1,cas2,cas8b1,cas7,cas5,cas3,cas4	csm6,WYL,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cas1,cas2,cas8b1,cas7,cas5,cas3,cas4,csa3,cas14j,DinG	Type I-B,Type III-C,Type III-B,Type III-A,Type III-D	GATTCAATCGAACCGATACGGAATGGAAAC,GATTCAATCGAACCGATACGGAATGGAAAC,GATTCAATCGAACCGATACGGAATGGAAAC	30,30,30	0	0	NA	NA	I-A,II-B,III-A:I-A,II-B,III-A:I-A,II-B,III-A	23,23,23	23	TypeI-B,TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	csm6,WYL,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cas1,cas2,cas8b1,cas7,cas5,cas3,cas4,csa3,cas14j,DinG,c2c9_V-U4	NA|226aa|up_7|NC_016148.1_250562_251240_+,NA|163aa|up_3|NC_016148.1_254305_254794_+,NA|53aa|down_0|NC_016148.1_258249_258408_+	csm4gr5|309aa|up_9|NC_016148.1_248473_249400_+	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm5gr7|389aa|up_8|NC_016148.1_249396_250563_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	NA|226aa|up_7|NC_016148.1_250562_251240_+	NA	cas6|257aa|up_6|NC_016148.1_251232_252003_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas1|226aa|up_5|NC_016148.1_252081_252759_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	NA|411aa|up_4|NC_016148.1_252697_253930_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|163aa|up_3|NC_016148.1_254305_254794_+	NA	cas1|286aa|up_2|NC_016148.1_254790_255648_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|102aa|up_1|NC_016148.1_255650_255956_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas2|96aa|up_0|NC_016148.1_255933_256221_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|53aa|down_0|NC_016148.1_258249_258408_+	NA	NA|239aa|down_1|NC_016148.1_258398_259115_+	PRK06224, PRK06224, citryl-CoA lyase	NA|218aa|down_2|NC_016148.1_259459_260113_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|267aa|down_3|NC_016148.1_260140_260941_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|114aa|down_4|NC_016148.1_261149_261491_+	COG3370, COG3370, Uncharacterized protein conserved in archaea [Function unknown]	NA|307aa|down_5|NC_016148.1_261511_262432_+	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|438aa|down_6|NC_016148.1_262400_263714_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|256aa|down_7|NC_016148.1_264137_264905_-	PRK02412, aroD, type I 3-dehydroquinate dehydratase	NA|441aa|down_8|NC_016148.1_265067_266390_-	PLN02819, PLN02819, lysine-ketoglutarate reductase/saccharopine dehydrogenase	NA|73aa|down_9|NC_016148.1_266405_266624_-	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]
GCF_000233775.1_ASM23377v1	NC_016148	Thermovirga lienii DSM 17291, complete sequence	2	279012-282019	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2	csm6,WYL,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cas1,cas2,cas8b1,cas7,cas5,cas3,cas4,csa3,cas14j,DinG	Type I-B	GTTTTAGACCTTCCTATAAGGGATGGAAAC,GTTTTAGACCTTCCTATAAGGGATGGAAAC,GTTTTAGACCTTCCTATAAGGGATGGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	45,45,31	45	TypeI-B	csm6,WYL,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cas1,cas2,cas8b1,cas7,cas5,cas3,cas4,csa3,cas14j,DinG,c2c9_V-U4	NA,NA	NA|918aa|up_9|NC_016148.1_267654_270408_-	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	cas6|263aa|up_8|NC_016148.1_270600_271389_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas8b1|484aa|up_7|NC_016148.1_271363_272815_+	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas8b1|136aa|up_6|NC_016148.1_272820_273228_+	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802)	cas7|303aa|up_5|NC_016148.1_273260_274169_+	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI	cas5|235aa|up_4|NC_016148.1_274174_274879_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|749aa|up_3|NC_016148.1_274823_277070_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas4|174aa|up_2|NC_016148.1_277056_277578_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|332aa|up_1|NC_016148.1_277580_278576_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|88aa|up_0|NC_016148.1_278578_278842_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|383aa|down_0|NC_016148.1_283667_284816_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|448aa|down_1|NC_016148.1_285061_286405_-	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|172aa|down_2|NC_016148.1_286674_287190_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|238aa|down_3|NC_016148.1_287219_287933_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|794aa|down_4|NC_016148.1_287929_290311_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|391aa|down_5|NC_016148.1_290321_291494_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|191aa|down_6|NC_016148.1_291503_292076_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|268aa|down_7|NC_016148.1_292219_293023_-	PRK05463, PRK05463, putative hydro-lyase	NA|258aa|down_8|NC_016148.1_293019_293793_-	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA	NA|356aa|down_9|NC_016148.1_293806_294874_-	pfam02626, CT_A_B, Carboxyltransferase domain, subdomain A and B
