assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000231905.1_ASM23190v1	NC_017621	Streptococcus suis D12, complete sequence	1	36983-37124	1	CRISPRCasFinder	no		cas3,DinG,csa3,DEDDh	Orphan	CGCGACAGGAAAAAATGAGCCAGCCAAGCTGGAGCAGGTAGGGGCGGG	48	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,DEDDh	NA,NA	NA|279aa|up_9|NC_017621.1_23521_24358_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|172aa|up_8|NC_017621.1_24347_24863_+	pfam04093, MreD, rod shape-determining protein MreD	NA|419aa|up_7|NC_017621.1_24947_26204_+	COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown]	NA|323aa|up_6|NC_017621.1_26306_27275_+	PRK02269, PRK02269, ribose-phosphate diphosphokinase	NA|393aa|up_5|NC_017621.1_27361_28540_+	PRK07309, PRK07309, pyridoxal phosphate-dependent aminotransferase	NA|261aa|up_4|NC_017621.1_28526_29309_+	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO	NA|336aa|up_3|NC_017621.1_29305_30313_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|83aa|up_2|NC_017621.1_30305_30554_+	PRK12449, PRK12449, acyl carrier protein; Provisional	NA|236aa|up_1|NC_017621.1_30671_31379_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|485aa|up_0|NC_017621.1_35148_36603_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|187aa|down_0|NC_017621.1_37772_38333_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|194aa|down_1|NC_017621.1_38325_38907_+	cd12870, MqsA, antitoxin MqsA for MqsR toxin	NA|516aa|down_2|NC_017621.1_38920_40468_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|277aa|down_3|NC_017621.1_40533_41364_+	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|272aa|down_4|NC_017621.1_41353_42169_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|309aa|down_5|NC_017621.1_42146_43073_+	pfam04556, DpnII, DpnII restriction endonuclease	NA|302aa|down_6|NC_017621.1_43072_43978_+	pfam04556, DpnII, DpnII restriction endonuclease	NA|421aa|down_7|NC_017621.1_44097_45360_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|163aa|down_8|NC_017621.1_45385_45874_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|362aa|down_9|NC_017621.1_45860_46946_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
GCF_000231905.1_ASM23190v1	NC_017621	Streptococcus suis D12, complete sequence	2	671094-671211	2	CRISPRCasFinder	no		cas3,DinG,csa3,DEDDh	Orphan	GATTTACGTTGGTATGAAGCCACTCGTCA	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,DEDDh	NA|162aa|up_3|NC_017621.1_666540_667026_+,NA|348aa|up_0|NC_017621.1_669196_670240_+,NA	NA|225aa|up_9|NC_017621.1_661838_662513_+	COG3935, DnaD, Putative primosome component and related proteins [DNA replication, recombination, and repair]	NA|228aa|up_8|NC_017621.1_662514_663198_+	COG2384, COG2384, Predicted SAM-dependent methyltransferase [General function prediction only]	NA|265aa|up_7|NC_017621.1_663187_663982_+	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3)	NA|275aa|up_6|NC_017621.1_664156_664981_+	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]	NA|290aa|up_5|NC_017621.1_665078_665948_+	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|198aa|up_4|NC_017621.1_665947_666541_+	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production	NA|162aa|up_3|NC_017621.1_666540_667026_+	NA	NA|349aa|up_2|NC_017621.1_667227_668274_+	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|284aa|up_1|NC_017621.1_668328_669180_+	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|348aa|up_0|NC_017621.1_669196_670240_+	NA	NA|129aa|down_0|NC_017621.1_673645_674032_+	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]	NA|850aa|down_1|NC_017621.1_674090_676640_-	cd16015, LTA_synthase, Lipoteichoic acid synthase like	NA|383aa|down_2|NC_017621.1_676852_678001_+	cd04955, GT4-like, glycosyltransferase family 4 proteins	NA|310aa|down_3|NC_017621.1_677997_678927_+	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|269aa|down_4|NC_017621.1_678929_679736_+	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|405aa|down_5|NC_017621.1_679735_680950_+	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|575aa|down_6|NC_017621.1_680970_682695_+	pfam05045, RgpF, Rhamnan synthesis protein F	NA|420aa|down_7|NC_017621.1_682727_683987_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|436aa|down_8|NC_017621.1_683983_685291_+	pfam09913, DUF2142, Predicted membrane protein (DUF2142)	NA|330aa|down_9|NC_017621.1_685313_686303_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface
GCF_000231905.1_ASM23190v1	NC_017621	Streptococcus suis D12, complete sequence	3	1606555-1606788	1,3	CRT,CRISPRCasFinder	no		cas3,DinG,csa3,DEDDh	Orphan	CGCAAAATGCTTTTGCTTCATTTCTAACCTCCCAGAGTC,AACCTCCCAGAGTCACTCCACTGACTCT	39,28	1	1	1606651-1606678	NC_017621.1_1606527-1606554	NA:NA	3,1	3	Orphan	cas3,DinG,csa3,DEDDh	NA|96aa|up_8|NC_017621.1_1600287_1600575_-,NA|104aa|up_7|NC_017621.1_1600571_1600883_-,NA|54aa|up_4|NC_017621.1_1602056_1602218_-,NA|300aa|up_2|NC_017621.1_1603439_1604339_+,NA	NA|156aa|up_9|NC_017621.1_1599101_1599569_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|96aa|up_8|NC_017621.1_1600287_1600575_-	NA	NA|104aa|up_7|NC_017621.1_1600571_1600883_-	NA	NA|65aa|up_6|NC_017621.1_1600962_1601157_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|61aa|up_5|NC_017621.1_1601379_1601562_+	pfam07411, DUF1508, Domain of unknown function (DUF1508)	NA|54aa|up_4|NC_017621.1_1602056_1602218_-	NA	NA|256aa|up_3|NC_017621.1_1602668_1603436_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|300aa|up_2|NC_017621.1_1603439_1604339_+	NA	NA|120aa|up_1|NC_017621.1_1604354_1604714_+	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325)	NA|180aa|up_0|NC_017621.1_1604710_1605250_+	pfam01850, PIN, PIN domain	NA|92aa|down_0|NC_017621.1_1606863_1607139_-	cd13831, HU, histone-like DNA-binding protein HU	NA|199aa|down_1|NC_017621.1_1607228_1607825_-	pfam09911, DUF2140, Uncharacterized protein conserved in bacteria (DUF2140)	NA|278aa|down_2|NC_017621.1_1607796_1608630_-	cd04506, SGNH_hydrolase_YpmR_like, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|278aa|down_3|NC_017621.1_1608622_1609456_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|554aa|down_4|NC_017621.1_1609549_1611211_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|142aa|down_5|NC_017621.1_1611213_1611639_-	COG1438, ArgR, Arginine repressor [Transcription]	NA|274aa|down_6|NC_017621.1_1611631_1612453_-	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|290aa|down_7|NC_017621.1_1612445_1613315_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|72aa|down_8|NC_017621.1_1613314_1613530_-	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|448aa|down_9|NC_017621.1_1613504_1614848_-	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed
GCF_000231905.1_ASM23190v1	NC_017621	Streptococcus suis D12, complete sequence	4	1704466-1704664	4	CRISPRCasFinder	no	cas3	cas3,DinG,csa3,DEDDh	Unclear	AACATGTCGCATATAATTGACATC	24	0	0	NA	NA	NA	3	3	Unclear	cas3,DinG,csa3,DEDDh	NA|88aa|up_4|NC_017621.1_1698792_1699056_-,NA|68aa|down_1|NC_017621.1_1704878_1705082_+,NA|115aa|down_3|NC_017621.1_1706186_1706531_+,NA|116aa|down_4|NC_017621.1_1706520_1706868_+	NA|476aa|up_9|NC_017621.1_1694123_1695551_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|180aa|up_8|NC_017621.1_1695647_1696187_-	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]	NA|306aa|up_7|NC_017621.1_1696196_1697114_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|75aa|up_6|NC_017621.1_1697127_1697352_-	pfam13268, DUF4059, Protein of unknown function (DUF4059)	cas3|448aa|up_5|NC_017621.1_1697369_1698713_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|88aa|up_4|NC_017621.1_1698792_1699056_-	NA	NA|333aa|up_3|NC_017621.1_1699874_1700873_-	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|750aa|up_2|NC_017621.1_1700874_1703124_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|108aa|up_1|NC_017621.1_1703123_1703447_-	COG4839, FtsL, Protein required for the initiation of cell division [Cell division and chromosome partitioning]	NA|317aa|up_0|NC_017621.1_1703457_1704408_-	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]	NA|63aa|down_0|NC_017621.1_1704676_1704865_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|68aa|down_1|NC_017621.1_1704878_1705082_+	NA	NA|361aa|down_2|NC_017621.1_1705091_1706174_+	pfam11683, DUF3278, Protein of unknown function (DUF3278)	NA|115aa|down_3|NC_017621.1_1706186_1706531_+	NA	NA|116aa|down_4|NC_017621.1_1706520_1706868_+	NA	NA|143aa|down_5|NC_017621.1_1706920_1707349_+	pfam07009, NusG_II, NusG domain II	NA|319aa|down_6|NC_017621.1_1707656_1708613_-	PRK13387, PRK13387, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional	NA|350aa|down_7|NC_017621.1_1708605_1709655_-	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|160aa|down_8|NC_017621.1_1709732_1710212_-	COG4939, COG4939, Major membrane immunogen, membrane-anchored lipoprotein [Function unknown]	NA|330aa|down_9|NC_017621.1_1710290_1711280_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail
