assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000230275.1_ASM23027v1	NC_016077	Acidaminococcus intestini RyC-MR95, complete sequence	1	1011010-1014466	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas3,DEDDh,PD-DExK,csa3,cas9,cas1,cas2,csn2,cas4,WYL	Type II-C,Type II-B,Type II-A	GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC,GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC,GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC,GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC	36,36,36,36	1	1	1011178-1011207	NC_016077.1_1834656-1834627	NA:NA:NA:NA	50,52,52,50	52	TypeII-C,TypeII-B,TypeII-A	cas3,DEDDh,PD-DExK,csa3,cas9,cas1,cas2,csn2,cas4,WYL	NA,NA|91aa|down_1|NC_016077.1_1015755_1016028_+,NA|156aa|down_2|NC_016077.1_1016303_1016771_-	NA|256aa|up_9|NC_016077.1_997145_997913_-	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family	NA|106aa|up_8|NC_016077.1_998417_998735_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|326aa|up_7|NC_016077.1_998731_999709_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|230aa|up_6|NC_016077.1_1000628_1001318_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|304aa|up_5|NC_016077.1_1001405_1002317_+	COG1313, PflX, Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only]	NA|310aa|up_4|NC_016077.1_1002401_1003331_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	cas9|1359aa|up_3|NC_016077.1_1005025_1009102_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|291aa|up_2|NC_016077.1_1009098_1009971_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NC_016077.1_1009982_1010288_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|223aa|up_0|NC_016077.1_1010284_1010953_+	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2	NA|342aa|down_0|NC_016077.1_1014574_1015600_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|91aa|down_1|NC_016077.1_1015755_1016028_+	NA	NA|156aa|down_2|NC_016077.1_1016303_1016771_-	NA	NA|263aa|down_3|NC_016077.1_1017250_1018039_+	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|342aa|down_4|NC_016077.1_1019360_1020386_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|812aa|down_5|NC_016077.1_1020400_1022836_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|296aa|down_6|NC_016077.1_1024745_1025633_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|366aa|down_7|NC_016077.1_1026001_1027099_+	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]	NA|254aa|down_8|NC_016077.1_1027771_1028533_+	pfam14393, DUF4422, Domain of unknown function (DUF4422)	NA|321aa|down_9|NC_016077.1_1028562_1029525_+	pfam04991, LicD, LicD family
GCF_000230275.1_ASM23027v1	NC_016077	Acidaminococcus intestini RyC-MR95, complete sequence	2	1838749-1838857	2	CRISPRCasFinder	no		cas3,DEDDh,PD-DExK,csa3,cas9,cas1,cas2,csn2,cas4,WYL	Orphan	CCCCTTTCCCCGTCGTGGGGACGCCAAGCACAATATCAGC	40	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,PD-DExK,csa3,cas9,cas1,cas2,csn2,cas4,WYL	NA|128aa|up_4|NC_016077.1_1833976_1834360_-,NA|101aa|up_2|NC_016077.1_1835008_1835311_-,NA|90aa|up_1|NC_016077.1_1835295_1835565_-,NA|110aa|down_0|NC_016077.1_1838859_1839189_-,NA|703aa|down_2|NC_016077.1_1846987_1849096_-,NA|230aa|down_3|NC_016077.1_1849092_1849782_-,NA|187aa|down_4|NC_016077.1_1849708_1850269_-	NA|629aa|up_9|NC_016077.1_1826372_1828259_-	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|467aa|up_8|NC_016077.1_1829076_1830477_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|382aa|up_7|NC_016077.1_1830575_1831721_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|308aa|up_6|NC_016077.1_1832254_1833178_+	pfam04204, HTS, Homoserine O-succinyltransferase	NA|154aa|up_5|NC_016077.1_1833188_1833650_+	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|128aa|up_4|NC_016077.1_1833976_1834360_-	NA	NA|172aa|up_3|NC_016077.1_1834493_1835009_-	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls	NA|101aa|up_2|NC_016077.1_1835008_1835311_-	NA	NA|90aa|up_1|NC_016077.1_1835295_1835565_-	NA	NA|223aa|up_0|NC_016077.1_1835877_1836546_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|110aa|down_0|NC_016077.1_1838859_1839189_-	NA	NA|2579aa|down_1|NC_016077.1_1839251_1846988_-	PHA00657, PHA00657, crystallin beta/gamma motif-containing protein	NA|703aa|down_2|NC_016077.1_1846987_1849096_-	NA	NA|230aa|down_3|NC_016077.1_1849092_1849782_-	NA	NA|187aa|down_4|NC_016077.1_1849708_1850269_-	NA	NA|949aa|down_5|NC_016077.1_1850261_1853108_-	PHA00661, PHA00661, hypothetical protein	NA|204aa|down_6|NC_016077.1_1853110_1853722_-	PHA00662, PHA00662, hypothetical protein	NA|128aa|down_7|NC_016077.1_1853781_1854165_-	PHA00664, PHA00664, hypothetical protein	NA|336aa|down_8|NC_016077.1_1854176_1855184_-	PHA00665, PHA00665, major capsid protein	NA|212aa|down_9|NC_016077.1_1855234_1855870_-	PHA00666, PHA00666, putative protease
