assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	1	385704-385777	1	CRISPRCasFinder	no	WYL,csa3	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-A	GCGAGGGAGGCTGCAGCGTGCAT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	NA,NA	NA|233aa|up_9|NC_019897.1_374291_374990_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|214aa|up_8|NC_019897.1_375072_375714_-	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein	NA|288aa|up_7|NC_019897.1_375714_376578_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|127aa|up_6|NC_019897.1_376574_376955_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|274aa|up_5|NC_019897.1_377262_378084_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|334aa|up_4|NC_019897.1_378080_379082_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|445aa|up_3|NC_019897.1_379044_380379_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|598aa|up_2|NC_019897.1_380526_382320_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|524aa|up_1|NC_019897.1_382323_383895_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|260aa|up_0|NC_019897.1_384247_385027_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|131aa|down_0|NC_019897.1_386025_386418_+	pfam11188, DUF2975, Protein of unknown function (DUF2975)	NA|74aa|down_1|NC_019897.1_386428_386650_+	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|308aa|down_2|NC_019897.1_386679_387603_+	pfam05675, DUF817, Protein of unknown function (DUF817)	NA|243aa|down_3|NC_019897.1_387574_388303_+	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	WYL|328aa|down_4|NC_019897.1_388326_389310_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|222aa|down_5|NC_019897.1_390475_391141_-	PRK01362, PRK01362, fructose-6-phosphate aldolase	NA|665aa|down_6|NC_019897.1_391229_393224_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|507aa|down_7|NC_019897.1_393201_394722_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|303aa|down_8|NC_019897.1_394844_395753_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|117aa|down_9|NC_019897.1_396640_396991_-	pfam09966, DUF2200, Uncharacterized protein conserved in bacteria (DUF2200)
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	2	1029953-1030027	2	CRISPRCasFinder	no		csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Orphan	CTGTAACGCGGATACCGCGTTACA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	NA|118aa|up_6|NC_019897.1_1021798_1022152_-,NA|257aa|up_4|NC_019897.1_1023655_1024426_-,NA|112aa|down_8|NC_019897.1_1040336_1040672_-	NA|764aa|up_9|NC_019897.1_1018430_1020722_+	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|220aa|up_8|NC_019897.1_1020802_1021462_+	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN	NA|49aa|up_7|NC_019897.1_1021534_1021681_-	NF033225, spore_CmpA, cortex morphogenetic protein CmpA	NA|118aa|up_6|NC_019897.1_1021798_1022152_-	NA	NA|160aa|up_5|NC_019897.1_1022552_1023032_+	PRK04351, PRK04351, SprT family protein	NA|257aa|up_4|NC_019897.1_1023655_1024426_-	NA	NA|235aa|up_3|NC_019897.1_1024863_1025568_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|560aa|up_2|NC_019897.1_1025586_1027266_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|496aa|up_1|NC_019897.1_1027258_1028746_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|369aa|up_0|NC_019897.1_1028771_1029878_+	cd01541, PBP1_AraR, ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators	NA|177aa|down_0|NC_019897.1_1030194_1030725_+	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily	NA|353aa|down_1|NC_019897.1_1030912_1031971_+	cd19974, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors	NA|617aa|down_2|NC_019897.1_1032013_1033864_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|499aa|down_3|NC_019897.1_1033890_1035387_+	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|437aa|down_4|NC_019897.1_1035565_1036876_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|300aa|down_5|NC_019897.1_1037071_1037971_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|276aa|down_6|NC_019897.1_1037967_1038795_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|417aa|down_7|NC_019897.1_1038918_1040169_-	cd00249, AGE, AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	NA|112aa|down_8|NC_019897.1_1040336_1040672_-	NA	NA|335aa|down_9|NC_019897.1_1040867_1041872_+	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	3	3124012-3124097	3	CRISPRCasFinder	no	WYL	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Unclear	GATTTAAGCGGGCGCATCCGTTTTGCGGA	29	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	NA,NA|51aa|down_3|NC_019897.1_3125987_3126140_-,NA|230aa|down_4|NC_019897.1_3126186_3126876_-	NA|285aa|up_9|NC_019897.1_3103965_3104820_-	pfam01226, Form_Nir_trans, Formate/nitrite transporter	NA|2736aa|up_8|NC_019897.1_3106371_3114579_-	TIGR02104, pulA_typeI, pullulanase, type I	WYL|223aa|up_7|NC_019897.1_3115931_3116600_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|204aa|up_6|NC_019897.1_3117290_3117902_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|419aa|up_5|NC_019897.1_3117973_3119230_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|279aa|up_4|NC_019897.1_3119307_3120144_-	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|296aa|up_3|NC_019897.1_3120331_3121219_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|308aa|up_2|NC_019897.1_3121215_3122139_-	pfam00950, ABC-3, ABC 3 transport family	NA|246aa|up_1|NC_019897.1_3122135_3122873_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|329aa|up_0|NC_019897.1_3122879_3123866_-	cd01016, TroA, Metal binding protein TroA	NA|270aa|down_0|NC_019897.1_3124149_3124959_-	PRK00768, nadE, ammonia-dependent NAD(+) synthetase	NA|145aa|down_1|NC_019897.1_3124981_3125416_-	pfam06491, Disulph_isomer, Disulphide isomerase	NA|151aa|down_2|NC_019897.1_3125519_3125972_-	pfam13045, DUF3905, Protein of unknown function (DUF3905)	NA|51aa|down_3|NC_019897.1_3125987_3126140_-	NA	NA|230aa|down_4|NC_019897.1_3126186_3126876_-	NA	NA|285aa|down_5|NC_019897.1_3127023_3127878_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|427aa|down_6|NC_019897.1_3128021_3129302_+	pfam03486, HI0933_like, HI0933-like protein	NA|364aa|down_7|NC_019897.1_3129382_3130474_-	cd20000, PBP1_ABC_rhamnose, rhamnose ABC transporter substrate-binding protein	NA|325aa|down_8|NC_019897.1_3130576_3131551_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|350aa|down_9|NC_019897.1_3131554_3132604_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	4	3270708-3271074	1,4,1	CRT,CRISPRCasFinder,PILER-CR	no	csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas3,cas5	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type III-C,Type III-A,Type III-B,Type III-D	TCCTTATAGGTACTATCAGAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTTATAGGTACTATCAGAAC	22,30,30	0	0	NA	NA	NA:NA:NA	5,4,4	5	TypeIII-A,TypeIII-B,TypeIII-D,TypeIII-C	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas10|551aa|up_1|NC_019897.1_3267328_3268981_-,cas8b1|684aa|down_9|NC_019897.1_3291072_3293124_-	NA|71aa|up_9|NC_019897.1_3255621_3255834_-	PRK09415, PRK09415, RNA polymerase factor sigma C; Reviewed	NA|409aa|up_8|NC_019897.1_3256257_3257484_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|447aa|up_7|NC_019897.1_3257745_3259086_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|553aa|up_6|NC_019897.1_3259242_3260901_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	csm3gr7|714aa|up_5|NC_019897.1_3261331_3263473_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|134aa|up_4|NC_019897.1_3263485_3263887_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|416aa|up_3|NC_019897.1_3263883_3265131_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csm3gr7|735aa|up_2|NC_019897.1_3265127_3267332_-	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10	cas10|551aa|up_1|NC_019897.1_3267328_3268981_-	NA	csx1|450aa|up_0|NC_019897.1_3269002_3270352_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|409aa|down_0|NC_019897.1_3274017_3275244_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_1|NC_019897.1_3277837_3279064_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_2|NC_019897.1_3280451_3281678_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas2|88aa|down_3|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_4|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|down_5|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|down_6|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|down_7|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|down_8|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|down_9|NC_019897.1_3291072_3293124_-	NA
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	5	3272406-3273787	2,5,2	PILER-CR,CRISPRCasFinder,CRT	no	csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B,Type III-C,Type III-A,Type III-B,Type III-D	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	19,19,20	20	TypeI-B,TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas10|551aa|up_1|NC_019897.1_3267328_3268981_-,cas8b1|684aa|down_9|NC_019897.1_3291072_3293124_-	NA|71aa|up_9|NC_019897.1_3255621_3255834_-	PRK09415, PRK09415, RNA polymerase factor sigma C; Reviewed	NA|409aa|up_8|NC_019897.1_3256257_3257484_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|447aa|up_7|NC_019897.1_3257745_3259086_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|553aa|up_6|NC_019897.1_3259242_3260901_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	csm3gr7|714aa|up_5|NC_019897.1_3261331_3263473_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|134aa|up_4|NC_019897.1_3263485_3263887_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|416aa|up_3|NC_019897.1_3263883_3265131_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csm3gr7|735aa|up_2|NC_019897.1_3265127_3267332_-	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10	cas10|551aa|up_1|NC_019897.1_3267328_3268981_-	NA	csx1|450aa|up_0|NC_019897.1_3269002_3270352_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|409aa|down_0|NC_019897.1_3274017_3275244_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_1|NC_019897.1_3277837_3279064_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_2|NC_019897.1_3280451_3281678_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas2|88aa|down_3|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_4|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|down_5|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|down_6|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|down_7|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|down_8|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|down_9|NC_019897.1_3291072_3293124_-	NA
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	6	3275311-3277541	6,3,3	CRISPRCasFinder,CRT,PILER-CR	no	csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B,Type III-C,Type III-A,Type III-B,Type III-D	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	33,33,31	33	TypeI-B,TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas10|551aa|up_2|NC_019897.1_3267328_3268981_-,cas8b1|684aa|down_8|NC_019897.1_3291072_3293124_-	NA|409aa|up_9|NC_019897.1_3256257_3257484_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|447aa|up_8|NC_019897.1_3257745_3259086_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|553aa|up_7|NC_019897.1_3259242_3260901_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	csm3gr7|714aa|up_6|NC_019897.1_3261331_3263473_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|134aa|up_5|NC_019897.1_3263485_3263887_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|416aa|up_4|NC_019897.1_3263883_3265131_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csm3gr7|735aa|up_3|NC_019897.1_3265127_3267332_-	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10	cas10|551aa|up_2|NC_019897.1_3267328_3268981_-	NA	csx1|450aa|up_1|NC_019897.1_3269002_3270352_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|409aa|up_0|NC_019897.1_3274017_3275244_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_0|NC_019897.1_3277837_3279064_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_1|NC_019897.1_3280451_3281678_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas2|88aa|down_2|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_3|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|down_4|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|down_5|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|down_6|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|down_7|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|down_8|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|down_9|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	7	3279131-3280155	7,4,4	CRISPRCasFinder,CRT,PILER-CR	no	csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B,Type III-C,Type III-A,Type III-B,Type III-D	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	15,15,14	15	TypeI-B,TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas10|551aa|up_3|NC_019897.1_3267328_3268981_-,cas8b1|684aa|down_7|NC_019897.1_3291072_3293124_-	NA|447aa|up_9|NC_019897.1_3257745_3259086_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|553aa|up_8|NC_019897.1_3259242_3260901_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	csm3gr7|714aa|up_7|NC_019897.1_3261331_3263473_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|134aa|up_6|NC_019897.1_3263485_3263887_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|416aa|up_5|NC_019897.1_3263883_3265131_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csm3gr7|735aa|up_4|NC_019897.1_3265127_3267332_-	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10	cas10|551aa|up_3|NC_019897.1_3267328_3268981_-	NA	csx1|450aa|up_2|NC_019897.1_3269002_3270352_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|409aa|up_1|NC_019897.1_3274017_3275244_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|up_0|NC_019897.1_3277837_3279064_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|down_0|NC_019897.1_3280451_3281678_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas2|88aa|down_1|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_2|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|down_3|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|down_4|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|down_5|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|down_6|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|down_7|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|down_8|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|431aa|down_9|NC_019897.1_3294083_3295376_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	8	3281745-3282977	8,5,5	CRISPRCasFinder,CRT,PILER-CR	no	csx19,csm3gr7,cas10,csx1,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B,Type III-C,Type III-A,Type III-B,Type III-D	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	18,18,17	18	TypeI-B,TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas10|551aa|up_4|NC_019897.1_3267328_3268981_-,cas8b1|684aa|down_6|NC_019897.1_3291072_3293124_-	NA|553aa|up_9|NC_019897.1_3259242_3260901_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	csm3gr7|714aa|up_8|NC_019897.1_3261331_3263473_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|134aa|up_7|NC_019897.1_3263485_3263887_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|416aa|up_6|NC_019897.1_3263883_3265131_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csm3gr7|735aa|up_5|NC_019897.1_3265127_3267332_-	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10	cas10|551aa|up_4|NC_019897.1_3267328_3268981_-	NA	csx1|450aa|up_3|NC_019897.1_3269002_3270352_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|409aa|up_2|NC_019897.1_3274017_3275244_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|up_1|NC_019897.1_3277837_3279064_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|up_0|NC_019897.1_3280451_3281678_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas2|88aa|down_0|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_1|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|down_2|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|down_3|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|down_4|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|down_5|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|down_6|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|down_7|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|431aa|down_8|NC_019897.1_3294083_3295376_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|426aa|down_9|NC_019897.1_3295540_3296818_+	pfam00665, rve, Integrase core domain
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	9	3284570-3285001	9,6,6	CRISPRCasFinder,CRT,PILER-CR	no	csm3gr7,cas10,csx1,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B,Type III-C,Type III-A,Type III-B,Type III-D	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	6,6,5	6	TypeI-B,TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas10|551aa|up_4|NC_019897.1_3267328_3268981_-,cas8b1|684aa|down_6|NC_019897.1_3291072_3293124_-	NA|553aa|up_9|NC_019897.1_3259242_3260901_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	csm3gr7|714aa|up_8|NC_019897.1_3261331_3263473_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|134aa|up_7|NC_019897.1_3263485_3263887_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|416aa|up_6|NC_019897.1_3263883_3265131_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csm3gr7|735aa|up_5|NC_019897.1_3265127_3267332_-	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10	cas10|551aa|up_4|NC_019897.1_3267328_3268981_-	NA	csx1|450aa|up_3|NC_019897.1_3269002_3270352_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|409aa|up_2|NC_019897.1_3274017_3275244_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|up_1|NC_019897.1_3277837_3279064_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|409aa|up_0|NC_019897.1_3280451_3281678_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas2|88aa|down_0|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_1|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|down_2|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|down_3|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|down_4|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|down_5|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|down_6|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|down_7|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|431aa|down_8|NC_019897.1_3294083_3295376_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|426aa|down_9|NC_019897.1_3295540_3296818_+	pfam00665, rve, Integrase core domain
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	10	3298557-3299057	10,7,7	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	7,7,6	7	TypeI-B	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas8b1|684aa|up_3|NC_019897.1_3291072_3293124_-,NA|222aa|down_6|NC_019897.1_3309149_3309815_+	cas2|88aa|up_9|NC_019897.1_3285168_3285432_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|up_8|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|up_7|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|up_6|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|up_5|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|up_4|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|up_3|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|up_2|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|431aa|up_1|NC_019897.1_3294083_3295376_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|426aa|up_0|NC_019897.1_3295540_3296818_+	pfam00665, rve, Integrase core domain	NA|409aa|down_0|NC_019897.1_3299353_3300580_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|448aa|down_1|NC_019897.1_3303018_3304362_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|215aa|down_2|NC_019897.1_3304801_3305446_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|344aa|down_3|NC_019897.1_3305532_3306564_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|513aa|down_4|NC_019897.1_3306740_3308279_-	PRK00074, guaA, GMP synthase; Reviewed	NA|170aa|down_5|NC_019897.1_3308375_3308885_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|222aa|down_6|NC_019897.1_3309149_3309815_+	NA	NA|569aa|down_7|NC_019897.1_3310087_3311794_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|264aa|down_8|NC_019897.1_3312059_3312851_-	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|265aa|down_9|NC_019897.1_3312860_3313655_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	11	3300647-3300944	11,8,8	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAACG	30,30,31	0	0	NA	NA	NA:NA:NA	4,4,3	4	TypeI-B	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas8b1|684aa|up_4|NC_019897.1_3291072_3293124_-,NA|222aa|down_5|NC_019897.1_3309149_3309815_+	cas1|331aa|up_9|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|up_8|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|up_7|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|up_6|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|up_5|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|up_4|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|up_3|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|431aa|up_2|NC_019897.1_3294083_3295376_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|426aa|up_1|NC_019897.1_3295540_3296818_+	pfam00665, rve, Integrase core domain	NA|409aa|up_0|NC_019897.1_3299353_3300580_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|448aa|down_0|NC_019897.1_3303018_3304362_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|215aa|down_1|NC_019897.1_3304801_3305446_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|344aa|down_2|NC_019897.1_3305532_3306564_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|513aa|down_3|NC_019897.1_3306740_3308279_-	PRK00074, guaA, GMP synthase; Reviewed	NA|170aa|down_4|NC_019897.1_3308375_3308885_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|222aa|down_5|NC_019897.1_3309149_3309815_+	NA	NA|569aa|down_6|NC_019897.1_3310087_3311794_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|264aa|down_7|NC_019897.1_3312059_3312851_-	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|265aa|down_8|NC_019897.1_3312860_3313655_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|346aa|down_9|NC_019897.1_3313651_3314689_-	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	12	3302535-3302761	12,9,9	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-B	GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC,GTTTCAATTCCTCATAGGTACGATCAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	3,3,2	3	TypeI-B	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	cas8b1|684aa|up_4|NC_019897.1_3291072_3293124_-,NA|222aa|down_5|NC_019897.1_3309149_3309815_+	cas1|331aa|up_9|NC_019897.1_3285464_3286457_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|171aa|up_8|NC_019897.1_3286501_3287014_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|797aa|up_7|NC_019897.1_3287048_3289439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|230aa|up_6|NC_019897.1_3289426_3290116_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|319aa|up_5|NC_019897.1_3290129_3291086_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|684aa|up_4|NC_019897.1_3291072_3293124_-	NA	cas6|250aa|up_3|NC_019897.1_3293140_3293890_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|431aa|up_2|NC_019897.1_3294083_3295376_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|426aa|up_1|NC_019897.1_3295540_3296818_+	pfam00665, rve, Integrase core domain	NA|409aa|up_0|NC_019897.1_3299353_3300580_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|448aa|down_0|NC_019897.1_3303018_3304362_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|215aa|down_1|NC_019897.1_3304801_3305446_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|344aa|down_2|NC_019897.1_3305532_3306564_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|513aa|down_3|NC_019897.1_3306740_3308279_-	PRK00074, guaA, GMP synthase; Reviewed	NA|170aa|down_4|NC_019897.1_3308375_3308885_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|222aa|down_5|NC_019897.1_3309149_3309815_+	NA	NA|569aa|down_6|NC_019897.1_3310087_3311794_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|264aa|down_7|NC_019897.1_3312059_3312851_-	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|265aa|down_8|NC_019897.1_3312860_3313655_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|346aa|down_9|NC_019897.1_3313651_3314689_-	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA
GCF_000227705.2_ASM22770v3	NC_019897	Thermobacillus composti KWC4, complete genome	13	3418362-3421103	10,13,10	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	Type I-C,Type I-U, Type I-U?	GTCGCCCGCTGTGCGCGGGCGTGGGTTGAAAC,GTCGCCCGCTGTGCGCGGGCGTGGGTTGAAAC,GTCGCCCGCTGTGCGCGGGCGTGGGTTGAAAC	32,32,32	0	0	NA	NA	NA:NA:NA	39,40,39	40	TypeI-C,TypeI-U?,TypeI-U	csa3,WYL,RT,DEDDh,cas3,DinG,csm3gr7,csx19,cas10,csx1,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6,cas8c,cas7	NA,NA|63aa|down_3|NC_019897.1_3424303_3424492_+,NA|113aa|down_9|NC_019897.1_3428533_3428872_-	NA|335aa|up_9|NC_019897.1_3400659_3401664_-	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|600aa|up_8|NC_019897.1_3401806_3403606_-	cd00005, CBM9_like_1, DOMON-like type 9 carbohydrate binding module of xylanases	NA|609aa|up_7|NC_019897.1_3403668_3405495_-	cd00005, CBM9_like_1, DOMON-like type 9 carbohydrate binding module of xylanases	NA|766aa|up_6|NC_019897.1_3405717_3408015_-	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|673aa|up_5|NC_019897.1_3408160_3410179_-	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown]	NA|254aa|up_4|NC_019897.1_3410459_3411221_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	cas3|789aa|up_3|NC_019897.1_3412456_3414823_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|215aa|up_2|NC_019897.1_3414862_3415507_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|598aa|up_1|NC_019897.1_3415503_3417297_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|293aa|up_0|NC_019897.1_3417300_3418179_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	NA|374aa|down_0|NC_019897.1_3421229_3422351_-	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner	NA|270aa|down_1|NC_019897.1_3422347_3423157_-	cd07531, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Bacillus AraL phosphatase, a putative sugar phosphatase	NA|261aa|down_2|NC_019897.1_3423315_3424098_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|63aa|down_3|NC_019897.1_3424303_3424492_+	NA	NA|305aa|down_4|NC_019897.1_3424646_3425561_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|212aa|down_5|NC_019897.1_3425590_3426226_-	COG0800, Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]	NA|191aa|down_6|NC_019897.1_3426430_3427003_+	pfam17253, DUF5320, Family of unknown function (DUF5320)	NA|293aa|down_7|NC_019897.1_3427088_3427967_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|134aa|down_8|NC_019897.1_3428098_3428500_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|113aa|down_9|NC_019897.1_3428533_3428872_-	NA
