assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000227605.2_ASM22760v2	NC_017307	Corynebacterium pseudotuberculosis CIP 52.97, complete genome	1	22351-22505	1,1	PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,csa3,DinG	Type I-E	TGGGGAACTACCTCCGCATACGCGGAGAAAAG,GGAACTACCTCCGCATACGCGGAGAAAAG	32,29	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B	2,2	2	TypeI-E	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,csa3,DinG	NA|224aa|up_4|NC_017307.2_17643_18315_-,NA|112aa|up_1|NC_017307.2_20316_20652_+,NA|100aa|up_0|NC_017307.2_21719_22019_-,NA	NA|260aa|up_9|NC_017307.2_12429_13209_+	pfam14256, YwiC, YwiC-like protein	NA|172aa|up_8|NC_017307.2_13536_14052_+	smart00112, CA, Cadherin repeats	NA|334aa|up_7|NC_017307.2_14683_15685_+	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|362aa|up_6|NC_017307.2_15681_16767_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|258aa|up_5|NC_017307.2_16768_17542_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|224aa|up_4|NC_017307.2_17643_18315_-	NA	NA|179aa|up_3|NC_017307.2_18392_18929_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|257aa|up_2|NC_017307.2_18990_19761_+	pfam01694, Rhomboid, Rhomboid family	NA|112aa|up_1|NC_017307.2_20316_20652_+	NA	NA|100aa|up_0|NC_017307.2_21719_22019_-	NA	cas2|124aa|down_0|NC_017307.2_22523_22895_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|down_1|NC_017307.2_22895_23849_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas3|896aa|down_2|NC_017307.2_23851_26539_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas6e|237aa|down_3|NC_017307.2_26559_27270_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|538aa|down_4|NC_017307.2_27480_29094_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|down_5|NC_017307.2_29090_29684_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|356aa|down_6|NC_017307.2_29683_30751_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|231aa|down_7|NC_017307.2_30762_31455_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|347aa|down_8|NC_017307.2_31529_32570_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|down_9|NC_017307.2_32977_33901_+	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins
GCF_000227605.2_ASM22760v2	NC_017307	Corynebacterium pseudotuberculosis CIP 52.97, complete genome	2	27321-27392	2	CRISPRCasFinder	no	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,csa3,DinG	Type I-E	TTCCTCGCGTCCTGCGGGGGTAG	23	0	0	NA	NA	NA	1	1	TypeI-E	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,csa3,DinG	NA|224aa|up_8|NC_017307.2_17643_18315_-,NA|112aa|up_5|NC_017307.2_20316_20652_+,NA|100aa|up_4|NC_017307.2_21719_22019_-,NA	NA|258aa|up_9|NC_017307.2_16768_17542_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|224aa|up_8|NC_017307.2_17643_18315_-	NA	NA|179aa|up_7|NC_017307.2_18392_18929_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|257aa|up_6|NC_017307.2_18990_19761_+	pfam01694, Rhomboid, Rhomboid family	NA|112aa|up_5|NC_017307.2_20316_20652_+	NA	NA|100aa|up_4|NC_017307.2_21719_22019_-	NA	cas2|124aa|up_3|NC_017307.2_22523_22895_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|up_2|NC_017307.2_22895_23849_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas3|896aa|up_1|NC_017307.2_23851_26539_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas6e|237aa|up_0|NC_017307.2_26559_27270_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|538aa|down_0|NC_017307.2_27480_29094_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|down_1|NC_017307.2_29090_29684_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|356aa|down_2|NC_017307.2_29683_30751_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|231aa|down_3|NC_017307.2_30762_31455_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|347aa|down_4|NC_017307.2_31529_32570_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|down_5|NC_017307.2_32977_33901_+	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins	NA|289aa|down_6|NC_017307.2_33953_34820_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|329aa|down_7|NC_017307.2_34828_35815_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|356aa|down_8|NC_017307.2_35814_36882_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|351aa|down_9|NC_017307.2_36928_37981_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD
GCF_000227605.2_ASM22760v2	NC_017307	Corynebacterium pseudotuberculosis CIP 52.97, complete genome	3	1843366-1843517	2,3	PILER-CR,CRISPRCasFinder	no	DinG	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,csa3,DinG	Type IV-A	GAACTACCTCCGCGTGCGCGGAGAAAAG,CTTTTCTCCGCGCACGCGGAGGTAGTTC	28,28	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B	2,2	2	Orphan	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,csa3,DinG	NA,NA|90aa|down_0|NC_017307.2_1843562_1843832_+,NA|76aa|down_1|NC_017307.2_1843809_1844037_+,NA|64aa|down_2|NC_017307.2_1844023_1844215_+,NA|82aa|down_4|NC_017307.2_1844566_1844812_+,NA|280aa|down_5|NC_017307.2_1845601_1846441_-,NA|76aa|down_7|NC_017307.2_1847680_1847908_-,NA|80aa|down_8|NC_017307.2_1848732_1848972_-	NA|245aa|up_9|NC_017307.2_1833242_1833977_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|256aa|up_8|NC_017307.2_1834015_1834783_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|298aa|up_7|NC_017307.2_1834855_1835749_-	PRK00865, PRK00865, glutamate racemase; Provisional	NA|273aa|up_6|NC_017307.2_1835822_1836641_-	pfam01694, Rhomboid, Rhomboid family	NA|179aa|up_5|NC_017307.2_1836727_1837264_-	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|127aa|up_4|NC_017307.2_1837358_1837739_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|453aa|up_3|NC_017307.2_1837864_1839223_+	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	DinG|665aa|up_2|NC_017307.2_1839275_1841270_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|166aa|up_1|NC_017307.2_1841293_1841791_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|428aa|up_0|NC_017307.2_1841787_1843071_-	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|90aa|down_0|NC_017307.2_1843562_1843832_+	NA	NA|76aa|down_1|NC_017307.2_1843809_1844037_+	NA	NA|64aa|down_2|NC_017307.2_1844023_1844215_+	NA	NA|80aa|down_3|NC_017307.2_1844284_1844524_+	pfam02661, Fic, Fic/DOC family	NA|82aa|down_4|NC_017307.2_1844566_1844812_+	NA	NA|280aa|down_5|NC_017307.2_1845601_1846441_-	NA	NA|88aa|down_6|NC_017307.2_1847166_1847430_-	cd02042, ParAB_family, partition proteins ParAB family	NA|76aa|down_7|NC_017307.2_1847680_1847908_-	NA	NA|80aa|down_8|NC_017307.2_1848732_1848972_-	NA	NA|51aa|down_9|NC_017307.2_1849327_1849480_-	pfam04796, RepA_C, Plasmid encoded RepA protein
