assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000226155.1_ASM22615v1	NC_017548	Pseudomonas aeruginosa M18, complete sequence	1	335904-336017	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	NA,NA|168aa|down_2|NC_017548.1_340589_341093_-,NA|251aa|down_5|NC_017548.1_342846_343599_-,NA|185aa|down_7|NC_017548.1_344367_344922_-	NA|293aa|up_9|NC_017548.1_322752_323631_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NC_017548.1_323793_324459_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NC_017548.1_324519_325581_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NC_017548.1_325836_327213_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NC_017548.1_327491_328244_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NC_017548.1_328284_329643_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NC_017548.1_329708_331079_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NC_017548.1_331194_332298_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NC_017548.1_332716_333814_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NC_017548.1_333868_335023_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NC_017548.1_337060_339448_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NC_017548.1_339558_340611_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NC_017548.1_340589_341093_-	NA	NA|204aa|down_3|NC_017548.1_341197_341809_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NC_017548.1_341807_342827_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NC_017548.1_342846_343599_-	NA	NA|233aa|down_6|NC_017548.1_343647_344346_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NC_017548.1_344367_344922_-	NA	NA|165aa|down_8|NC_017548.1_345187_345682_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NC_017548.1_345684_346377_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_000226155.1_ASM22615v1	NC_017548	Pseudomonas aeruginosa M18, complete sequence	2	1542032-1543019	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	Orphan	GTTCACTGCCGTACAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTANAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	16,16,16	16	Orphan	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	NA|105aa|up_0|NC_017548.1_1541445_1541760_+,NA|32aa|down_0|NC_017548.1_1543339_1543435_+,NA|141aa|down_1|NC_017548.1_1543815_1544238_-,NA|59aa|down_6|NC_017548.1_1547416_1547593_-	NA|329aa|up_9|NC_017548.1_1531165_1532152_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|110aa|up_8|NC_017548.1_1532168_1532498_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_7|NC_017548.1_1532630_1534169_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_6|NC_017548.1_1534446_1535202_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|506aa|up_5|NC_017548.1_1535407_1536925_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|NC_017548.1_1536964_1537804_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|NC_017548.1_1538068_1538539_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|NC_017548.1_1538602_1540087_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|NC_017548.1_1540282_1541068_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|NC_017548.1_1541445_1541760_+	NA	NA|32aa|down_0|NC_017548.1_1543339_1543435_+	NA	NA|141aa|down_1|NC_017548.1_1543815_1544238_-	NA	NA|177aa|down_2|NC_017548.1_1544337_1544868_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_3|NC_017548.1_1545050_1545248_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|213aa|down_4|NC_017548.1_1545226_1545865_-	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|393aa|down_5|NC_017548.1_1546230_1547409_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_6|NC_017548.1_1547416_1547593_-	NA	NA|308aa|down_7|NC_017548.1_1547719_1548643_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_8|NC_017548.1_1548774_1550268_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_9|NC_017548.1_1550283_1551180_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase
GCF_000226155.1_ASM22615v1	NC_017548	Pseudomonas aeruginosa M18, complete sequence	3	1909232-1909333	3	CRISPRCasFinder	no	DEDDh	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	NA|454aa|up_7|NC_017548.1_1901357_1902719_-,NA|106aa|down_6|NC_017548.1_1915576_1915894_+	NA|286aa|up_9|NC_017548.1_1899553_1900411_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|NC_017548.1_1900550_1901354_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|NC_017548.1_1901357_1902719_-	NA	NA|74aa|up_6|NC_017548.1_1902861_1903083_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|NC_017548.1_1903376_1904234_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|NC_017548.1_1904451_1904763_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|NC_017548.1_1904759_1906415_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|NC_017548.1_1906504_1908304_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|NC_017548.1_1908300_1908927_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|NC_017548.1_1909035_1909194_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|NC_017548.1_1909468_1910593_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|NC_017548.1_1910625_1910892_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|NC_017548.1_1911173_1913006_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|NC_017548.1_1913068_1913632_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|NC_017548.1_1913613_1914441_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|NC_017548.1_1914447_1915377_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|NC_017548.1_1915576_1915894_+	NA	NA|214aa|down_7|NC_017548.1_1916040_1916682_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|NC_017548.1_1916786_1917686_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|NC_017548.1_1917695_1918031_-	PRK10089, PRK10089, chaperone CsaA
GCF_000226155.1_ASM22615v1	NC_017548	Pseudomonas aeruginosa M18, complete sequence	4	2878171-2879037	2,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	Type I-F	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,14,14	14	TypeI-F	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	NA|82aa|up_7|NC_017548.1_2858021_2858267_-,NA|266aa|up_1|NC_017548.1_2875908_2876706_-,NA|105aa|down_6|NC_017548.1_2888521_2888836_-	NA|70aa|up_9|NC_017548.1_2856774_2856984_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_8|NC_017548.1_2856980_2857985_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_7|NC_017548.1_2858021_2858267_-	NA	NA|305aa|up_6|NC_017548.1_2858522_2859437_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_5|NC_017548.1_2859609_2860623_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_4|NC_017548.1_2860702_2861266_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_3|NC_017548.1_2861910_2862675_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_2|NC_017548.1_2862747_2875776_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_1|NC_017548.1_2875908_2876706_-	NA	NA|171aa|up_0|NC_017548.1_2877263_2877776_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|NC_017548.1_2879160_2879724_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|NC_017548.1_2879727_2880756_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|NC_017548.1_2880766_2881750_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|down_3|NC_017548.1_2881736_2883041_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|NC_017548.1_2883098_2886329_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|NC_017548.1_2886325_2887300_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|NC_017548.1_2888521_2888836_-	NA	NA|307aa|down_7|NC_017548.1_2889311_2890232_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_8|NC_017548.1_2890265_2891684_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_9|NC_017548.1_2891765_2892446_-	cd01012, YcaC_related, YcaC related amidohydrolases; E
GCF_000226155.1_ASM22615v1	NC_017548	Pseudomonas aeruginosa M18, complete sequence	5	2887565-2888252	3,5,3	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	Type I-F	GTTCACTGCCGTGTAGGCAGCTAAGAAA,TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	11,11,11	11	TypeI-F	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL	NA|266aa|up_7|NC_017548.1_2875908_2876706_-,NA|105aa|down_0|NC_017548.1_2888521_2888836_-	NA|255aa|up_9|NC_017548.1_2861910_2862675_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_8|NC_017548.1_2862747_2875776_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_7|NC_017548.1_2875908_2876706_-	NA	NA|171aa|up_6|NC_017548.1_2877263_2877776_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|NC_017548.1_2879160_2879724_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|NC_017548.1_2879727_2880756_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|NC_017548.1_2880766_2881750_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|up_2|NC_017548.1_2881736_2883041_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|NC_017548.1_2883098_2886329_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|NC_017548.1_2886325_2887300_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|NC_017548.1_2888521_2888836_-	NA	NA|307aa|down_1|NC_017548.1_2889311_2890232_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_2|NC_017548.1_2890265_2891684_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_3|NC_017548.1_2891765_2892446_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_4|NC_017548.1_2892543_2893404_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_5|NC_017548.1_2893504_2894443_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|548aa|down_6|NC_017548.1_2894446_2896090_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_7|NC_017548.1_2896448_2896874_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_8|NC_017548.1_2896866_2898186_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|470aa|down_9|NC_017548.1_2898364_2899774_+	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
