The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017524	Mycobacterium tuberculosis CTRI-2, complete sequence	4398525	2936090	2974362	4398525	head,tRNA,terminase,capsid,integrase,protease	Mycobacterium_phage(33.33%)	46	2964891:2964918	2974515:2974542
WP_003413486.1|2936090_2938169_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2938277_2938505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2938501_2939887_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2940231_2940732_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2940748_2941189_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003902320.1|2941284_2942013_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2941997_2942351_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2942363_2942789_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2942785_2943460_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2943537_2944359_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2944494_2945388_+	universal stress protein TB31.7	NA	NA	NA	NA	NA
WP_003413594.1|2945390_2946209_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2946223_2947405_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2947463_2947895_-	hypoxic response protein Hrp1	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2948408_2949650_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_085976157.1|2950064_2950322_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2950668_2951793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2951794_2952334_+	archease	NA	NA	NA	NA	NA
WP_003413619.1|2953810_2954092_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2954236_2954722_-	non-heme di-iron catalase	NA	NA	NA	NA	NA
WP_003908019.1|2954748_2955003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2955006_2957343_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2957371_2957614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2957614_2958292_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2958487_2959144_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2959306_2959753_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2959927_2960260_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2960379_2960739_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2960840_2961299_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2961434_2961815_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2961811_2963308_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_003912823.1|2963542_2963734_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
2964891:2964918	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2965024_2965456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2965452_2966451_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2966464_2966929_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003908028.1|2966916_2967168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899411.1|2967338_2968778_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2968785_2969319_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003900541.1|2969471_2969963_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	9.4e-18
WP_003899414.1|2970129_2970453_-	type II toxin-antitoxin system toxin	NA	NA	NA	NA	NA
WP_003899415.1|2970532_2970778_-	type II toxin-antitoxin system antitoxin	NA	NA	NA	NA	NA
WP_003899416.1|2970774_2972202_-	DUF3631 domain-containing protein	NA	NA	NA	NA	NA
WP_003899417.1|2972203_2972596_-	DUF2742 domain-containing protein	NA	NA	NA	NA	NA
WP_014585547.1|2972592_2972853_-	helix-turn-helix domain-containing protein	NA	A0A2P1CHK7	Mycobacterium_phage	63.1	1.9e-14
WP_003900543.1|2972869_2973232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899420.1|2973234_2974362_-|integrase	site-specific integrase	integrase	A0A1X9SFC1	Mycobacterium_phage	40.4	1.5e-66
2974515:2974542	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NC_017524	Mycobacterium tuberculosis CTRI-2, complete sequence	4398525	3093902	3118718	4398525	tRNA,integrase,transposase	Burkholderia_virus(60.0%)	25	3108591:3108650	3115584:3116938
WP_003906908.1|3093902_3095282_-|transposase	transposase	transposase	A0A7P9	Microcystis_virus	30.3	7.2e-31
WP_003414146.1|3095281_3095863_-|transposase	IS607-like element IS1602 family transposase	transposase	F9VHY9	Thermus_phage	30.6	5.0e-18
WP_014585551.1|3096064_3096961_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_003414149.1|3096957_3097641_-	4'-phosphopantetheinyl transferase	NA	NA	NA	NA	NA
WP_003414151.1|3097637_3098612_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_003900574.1|3098756_3099320_-	LppA family lipoprotein	NA	NA	NA	NA	NA
WP_003414155.1|3099319_3101008_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
WP_003414157.1|3101011_3101338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003914429.1|3101510_3102098_+	DUF3558 family protein	NA	NA	NA	NA	NA
WP_003899485.1|3102116_3103766_+	CocE/NonD family hydrolase	NA	NA	NA	NA	NA
WP_003414166.1|3103867_3104224_-	type II toxin-antitoxin system toxin endoribonuclease MazF9	NA	NA	NA	NA	NA
WP_003901465.1|3104207_3104438_-	antitoxin MazE	NA	NA	NA	NA	NA
WP_003414172.1|3104480_3105524_-	DUF2293 domain-containing protein	NA	NA	NA	NA	NA
WP_003911993.1|3105714_3105990_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_003917684.1|3106165_3106420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938577.1|3106567_3106972_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414184.1|3106968_3107160_+	hypothetical protein	NA	NA	NA	NA	NA
3108591:3108650	attL	TGAACCGCCCCGGTGAGTCCGGAGACTCTCTGATCTGAGACCTCAGCCGGCGGCTGGTCT	NA	NA	NA	NA
WP_087902221.1|3108632_3109894_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899489.1|3110105_3110363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414190.1|3110467_3110779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414195.1|3111198_3111807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414198.1|3111877_3113287_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_003899491.1|3113283_3114096_+	ExeA family protein	NA	NA	NA	NA	NA
WP_087902221.1|3115625_3116887_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_087902221.1|3117457_3118718_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
3115584:3116938	attR	TGAACCGCCCCGGTGAGTCCGGAGACTCTCTGATCTGAGACCTCAGCCGGCGGCTGGTCTCTGGCGTTGAGCGTAGTAGGCAGCCTCGAGTTCGACCGGCGGGACGTCGCCGCAGTACTGGTAGAGGCGGCGATGGTTGAACCAGTCGACCCAGCGCGCGGTGGCCAACTCGACATCCTCGATGGACCGCCAGGGCTTGCCGGGTTTGATCAGCTCGGTCTTGTATAGGCCGTTGATCGTCTCGGCTAGTGCATTGTCATAGGAGCTTCCGACCGCTCCGACCGACGGTTGGATGCCTGCCTCGGCGAGCCGCTCGCTGAACCGGATCGATGTGTACTGAGATCCCCTATCCGTATGGTGGATAACGTCTTTCAGGTCGAGTACGCCTTCTTGTTGGCGGGTCCAGATGGCTTGCTCGATCGCGTCGAGGACCATGGAGGTGGCCATCGTGGAAGCGACCCGCCAGCCCAGGATCCTGCGAGCGTAGGCGTCGGTGACAAAGGCCACGTAGGCGAACCCTGCCCAGGTCGACACATAGGTGAGGTCTGCTACCCACAGCCGGTTAGGTGCTGGTGGTCCGAAGCGGCGCTGGACGAGATCGGCGGGACGGGCTGTGGCCGGATCAGCGATCGTGGTCCTGCGGGCTTTGCCGCGGGTGGTCCCGGACAGGCCGAGTTTGGTCATCAGCCGTTCGACGGTGCATCTGGCCACCTCGATGCCCTCACGGTTCAGGGTTAGCCACACTTTGCGGGCACCGTAAACACCGTAGTTGGCGGCGTGGACGCGGCTGATGTGCTCCTTGAGTTCGCCATCGCGCAGCTCGCGGCGGCTGGGCTCCCGGTTGATGTGGTCGTAGTAGGTCGATGGGGCGATCGGCACACCCAGCTCGGTCAGCTGTGTGCAGATCGACTCGACACCCCACCGCAAACCATCGGGGCCCTCGCGGTGGCCCTGATGATCGGCGATGAACCGGGTAATTAGCGTGCTGGCCGGTCGAGCTCGGCCGCGAAGAAAGCCGACGCGGTCTTTAAAATCGCGTTCGCCCTTCGCAATTCGGCGTTGTCCCGCCGCAAGCGCTTCAGCTCAGCGGATTCTTCGGTCGTGGTCCCGGGCCGTGCGCCGGCATCGACCTGCGCCTGGCGCACCCACTTACGCACCGTCTCCGCGCAGCCAACACCAAGTAGACGGGCGACCTCACTGATCGCTGCCCACTCCGAATCGTGCTGACCGCGGATCTCTGCGACCATCCGCACCGCCCGCTCACGCAGCTCCGGCGGGTACCTCCTCGATGAACCACCTGACATGACCCCATCCTTTCCAAGAACTGGAGTCTCCGGACATGCCGGGGCGGTTCA	NA	NA	NA	NA
