assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000221965.1_ASM22196v1	NC_017271	Xanthomonas campestris pv. raphani 756C, complete sequence	1	4287209-4287422	1	CRT	no		cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	TCAACTTGCTGCGGTCGCCNGC	22	0	0	NA	NA	NA	4	4	Orphan	cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|122aa|up_6|NC_017271.1_4280909_4281275_-,NA|307aa|up_5|NC_017271.1_4281271_4282192_-,NA|165aa|up_3|NC_017271.1_4283544_4284039_-,NA|148aa|down_4|NC_017271.1_4295999_4296443_-,NA|237aa|down_9|NC_017271.1_4301903_4302614_+	NA|161aa|up_9|NC_017271.1_4278076_4278559_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|129aa|up_8|NC_017271.1_4278576_4278963_+	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|456aa|up_7|NC_017271.1_4279005_4280373_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|122aa|up_6|NC_017271.1_4280909_4281275_-	NA	NA|307aa|up_5|NC_017271.1_4281271_4282192_-	NA	NA|307aa|up_4|NC_017271.1_4282622_4283543_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|165aa|up_3|NC_017271.1_4283544_4284039_-	NA	NA|126aa|up_2|NC_017271.1_4284187_4284565_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|433aa|up_1|NC_017271.1_4284850_4286149_+	pfam11906, DUF3426, Protein of unknown function (DUF3426)	NA|91aa|up_0|NC_017271.1_4286264_4286537_+	PRK00430, fis, DNA-binding transcriptional regulator Fis	NA|325aa|down_0|NC_017271.1_4292262_4293237_-	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]	NA|211aa|down_1|NC_017271.1_4293233_4293866_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|216aa|down_2|NC_017271.1_4293862_4294510_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|498aa|down_3|NC_017271.1_4294509_4296003_-	TIGR04222, integral_membrane_protein, TIGR04222 domain	NA|148aa|down_4|NC_017271.1_4295999_4296443_-	NA	NA|446aa|down_5|NC_017271.1_4296439_4297777_-	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases	NA|588aa|down_6|NC_017271.1_4297773_4299537_-	pfam12147, Methyltransf_20, Putative methyltransferase	NA|205aa|down_7|NC_017271.1_4299590_4300205_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|528aa|down_8|NC_017271.1_4300280_4301864_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|237aa|down_9|NC_017271.1_4301903_4302614_+	NA
GCF_000221965.1_ASM22196v1	NC_017271	Xanthomonas campestris pv. raphani 756C, complete sequence	2	4289686-4290716	1	CRISPRCasFinder	no		cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	GTGCTGCCATAGCCGGCGGTGAG	23	4	9	4289709-4289733|4289709-4289733|4289757-4289781|4289757-4289781|4289805-4289829|4289949-4289973|4289949-4289973|4289949-4289973|4289949-4289973	NC_017271.1_4288845-4288869|NC_017271.1_4289133-4289157|NC_017271.1_4289613-4289637|NC_017271.1_4288749-4288773|NC_017271.1_4289661-4289685|NC_017271.1_4288941-4288965|NC_017271.1_4289085-4289109|NC_017271.1_4289229-4289253|NC_017271.1_4289517-4289541	NA	21	21	Orphan	cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|122aa|up_6|NC_017271.1_4280909_4281275_-,NA|307aa|up_5|NC_017271.1_4281271_4282192_-,NA|165aa|up_3|NC_017271.1_4283544_4284039_-,NA|148aa|down_4|NC_017271.1_4295999_4296443_-,NA|237aa|down_9|NC_017271.1_4301903_4302614_+	NA|161aa|up_9|NC_017271.1_4278076_4278559_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|129aa|up_8|NC_017271.1_4278576_4278963_+	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|456aa|up_7|NC_017271.1_4279005_4280373_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|122aa|up_6|NC_017271.1_4280909_4281275_-	NA	NA|307aa|up_5|NC_017271.1_4281271_4282192_-	NA	NA|307aa|up_4|NC_017271.1_4282622_4283543_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|165aa|up_3|NC_017271.1_4283544_4284039_-	NA	NA|126aa|up_2|NC_017271.1_4284187_4284565_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|433aa|up_1|NC_017271.1_4284850_4286149_+	pfam11906, DUF3426, Protein of unknown function (DUF3426)	NA|91aa|up_0|NC_017271.1_4286264_4286537_+	PRK00430, fis, DNA-binding transcriptional regulator Fis	NA|325aa|down_0|NC_017271.1_4292262_4293237_-	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]	NA|211aa|down_1|NC_017271.1_4293233_4293866_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|216aa|down_2|NC_017271.1_4293862_4294510_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|498aa|down_3|NC_017271.1_4294509_4296003_-	TIGR04222, integral_membrane_protein, TIGR04222 domain	NA|148aa|down_4|NC_017271.1_4295999_4296443_-	NA	NA|446aa|down_5|NC_017271.1_4296439_4297777_-	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases	NA|588aa|down_6|NC_017271.1_4297773_4299537_-	pfam12147, Methyltransf_20, Putative methyltransferase	NA|205aa|down_7|NC_017271.1_4299590_4300205_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|528aa|down_8|NC_017271.1_4300280_4301864_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|237aa|down_9|NC_017271.1_4301903_4302614_+	NA
GCF_000221965.1_ASM22196v1	NC_017271	Xanthomonas campestris pv. raphani 756C, complete sequence	3	4595922-4601888	2,2,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGCGTAGGCAGCTCAGAAA,GTTCACTGCCGCGTAGGCAGCTCAGAAA,GTTCACTGCCGCGTAGGCAGCTCAGAAA,GTTCACTGCCGCGTAGGCAGCTCAGAAA	28,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F	99,99,70,70	99	TypeI-F	cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|348aa|up_9|NC_017271.1_4581876_4582920_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|432aa|up_8|NC_017271.1_4583110_4584406_-	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|541aa|up_7|NC_017271.1_4584581_4586204_-	PRK09255, PRK09255, malate synthase; Validated	NA|319aa|up_6|NC_017271.1_4586325_4587282_+	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	cas1|330aa|up_5|NC_017271.1_4587366_4588356_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1124aa|up_4|NC_017271.1_4588352_4591724_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|452aa|up_3|NC_017271.1_4591802_4593158_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|336aa|up_2|NC_017271.1_4593154_4594162_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|346aa|up_1|NC_017271.1_4594184_4595222_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|189aa|up_0|NC_017271.1_4595226_4595793_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|209aa|down_0|NC_017271.1_4602175_4602802_-	TIGR02227, Inactive_signal_peptidase_IA	NA|723aa|down_1|NC_017271.1_4603136_4605305_-	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|337aa|down_2|NC_017271.1_4605529_4606540_-	pfam01112, Asparaginase_2, Asparaginase	NA|210aa|down_3|NC_017271.1_4607144_4607774_-	cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	NA|144aa|down_4|NC_017271.1_4607776_4608208_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|192aa|down_5|NC_017271.1_4608266_4608842_+	COG3184, COG3184, Uncharacterized protein conserved in bacteria [Function unknown]	NA|259aa|down_6|NC_017271.1_4609927_4610704_-	cd02563, PseudoU_synth_TruC, tRNA pseudouridine isomerase C	NA|558aa|down_7|NC_017271.1_4610799_4612473_-	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed	NA|215aa|down_8|NC_017271.1_4612469_4613114_-	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown]	NA|369aa|down_9|NC_017271.1_4613286_4614393_+	PRK01966, ddl, D-alanine--D-alanine ligase
GCF_000221965.1_ASM22196v1	NC_017271	Xanthomonas campestris pv. raphani 756C, complete sequence	4	4686141-4686232	3	CRISPRCasFinder	no		cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	TCGCGGCCAAGGCCGCTCCTACGAC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,PD-DExK,csa3,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|329aa|up_9|NC_017271.1_4674459_4675446_-	TIGR03438, conserved_hypothetical_protein, dimethylhistidine N-methyltransferase	NA|430aa|up_8|NC_017271.1_4675442_4676732_-	TIGR03440, egtB_TIGR03440, ergothioneine biosynthesis protein EgtB	NA|394aa|up_7|NC_017271.1_4676797_4677979_+	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|491aa|up_6|NC_017271.1_4678277_4679750_-	cd13607, PBP2_AfProX_like, Substrate-binding protein ProX of ABC-type osmoregulatory transporter from Archaeoglobus fulgidus and its related proteins; the type 2 periplasmic-binding protein fold	NA|246aa|up_5|NC_017271.1_4679746_4680484_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|118aa|up_4|NC_017271.1_4680544_4680898_-	cd15899, EFh_CREC, EF-hand, calcium binding motif, found in CREC-EF hand family	NA|402aa|up_3|NC_017271.1_4680926_4682132_-	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|279aa|up_2|NC_017271.1_4682286_4683123_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|339aa|up_1|NC_017271.1_4683398_4684415_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|346aa|up_0|NC_017271.1_4684763_4685801_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|266aa|down_0|NC_017271.1_4686433_4687232_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|739aa|down_1|NC_017271.1_4687352_4689569_-	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|161aa|down_2|NC_017271.1_4689831_4690314_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|297aa|down_3|NC_017271.1_4690441_4691332_+	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed	NA|215aa|down_4|NC_017271.1_4691746_4692391_+	pfam14300, DUF4375, Domain of unknown function (DUF4375)	NA|372aa|down_5|NC_017271.1_4692656_4693772_-	cd01821, Rhamnogalacturan_acetylesterase_like, Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases	NA|219aa|down_6|NC_017271.1_4694293_4694950_-	PRK09273, PRK09273, hypothetical protein; Provisional	NA|252aa|down_7|NC_017271.1_4695108_4695864_-	TIGR01832, 2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase, 2-deoxy-D-gluconate 3-dehydrogenase	NA|285aa|down_8|NC_017271.1_4695939_4696794_-	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional	NA|353aa|down_9|NC_017271.1_4697824_4698883_-	cd01545, PBP1_SalR, ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators
