assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000219705.1_ASM21970v1	NC_015733	Pseudomonas putida S16, complete sequence	1	1190745-1190845	1	CRISPRCasFinder	no		RT,WYL,DEDDh,csa3,casR,DinG,cas3	Orphan	AGTCCGTCCGTATTACTAATGGC	23	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,csa3,casR,DinG,cas3	NA|186aa|up_8|NC_015733.1_1179332_1179890_+,NA|342aa|up_4|NC_015733.1_1184751_1185777_+,NA|107aa|down_0|NC_015733.1_1191072_1191393_-,NA|292aa|down_6|NC_015733.1_1197279_1198155_-,NA|145aa|down_9|NC_015733.1_1200150_1200585_+	NA|252aa|up_9|NC_015733.1_1178525_1179281_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|186aa|up_8|NC_015733.1_1179332_1179890_+	NA	NA|490aa|up_7|NC_015733.1_1179976_1181446_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|526aa|up_6|NC_015733.1_1181524_1183102_+	PRK00074, guaA, GMP synthase; Reviewed	NA|404aa|up_5|NC_015733.1_1183409_1184621_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|342aa|up_4|NC_015733.1_1184751_1185777_+	NA	NA|317aa|up_3|NC_015733.1_1186002_1186953_-	TIGR00721, Tfx_protein, DNA-binding protein, Tfx family	NA|511aa|up_2|NC_015733.1_1187183_1188716_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|119aa|up_1|NC_015733.1_1188734_1189091_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|51aa|up_0|NC_015733.1_1189150_1189303_+	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|107aa|down_0|NC_015733.1_1191072_1191393_-	NA	NA|529aa|down_1|NC_015733.1_1191395_1192982_-	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL	NA|280aa|down_2|NC_015733.1_1193175_1194015_-	TIGR02780, TrbJ_protein, P-type conjugative transfer protein TrbJ	NA|122aa|down_3|NC_015733.1_1194236_1194602_-	pfam17273, DUF5338, Family of unknown function (DUF5338)	NA|124aa|down_4|NC_015733.1_1194902_1195274_+	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ	NA|491aa|down_5|NC_015733.1_1195818_1197291_+	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|292aa|down_6|NC_015733.1_1197279_1198155_-	NA	NA|55aa|down_7|NC_015733.1_1198166_1198331_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|315aa|down_8|NC_015733.1_1199030_1199975_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|145aa|down_9|NC_015733.1_1200150_1200585_+	NA
GCF_000219705.1_ASM21970v1	NC_015733	Pseudomonas putida S16, complete sequence	2	2358288-2358392	2	CRISPRCasFinder	no		RT,WYL,DEDDh,csa3,casR,DinG,cas3	Orphan	CATCGAGGGTGGCGACGGCAACGA	24	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,csa3,casR,DinG,cas3	NA,NA	NA|315aa|up_9|NC_015733.1_2336611_2337556_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|471aa|up_8|NC_015733.1_2337737_2339150_+	PLN02880, PLN02880, tyrosine decarboxylase	NA|458aa|up_7|NC_015733.1_2339284_2340658_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|636aa|up_6|NC_015733.1_2340948_2342856_+	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]	NA|223aa|up_5|NC_015733.1_2342933_2343602_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|454aa|up_4|NC_015733.1_2343629_2344991_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|288aa|up_3|NC_015733.1_2345007_2345871_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|443aa|up_2|NC_015733.1_2345961_2347290_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|447aa|up_1|NC_015733.1_2347291_2348632_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|579aa|up_0|NC_015733.1_2348638_2350375_-	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|203aa|down_0|NC_015733.1_2361918_2362527_-	PRK08228, PRK08228, L(+)-tartrate dehydratase subunit beta; Validated	NA|300aa|down_1|NC_015733.1_2362523_2363423_-	PRK08230, PRK08230, tartrate dehydratase subunit alpha; Validated	NA|446aa|down_2|NC_015733.1_2363477_2364815_-	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed	NA|304aa|down_3|NC_015733.1_2365010_2365922_+	cd08479, PBP2_CrgA_like_9, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|162aa|down_4|NC_015733.1_2365983_2366469_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|233aa|down_5|NC_015733.1_2366811_2367510_-	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|839aa|down_6|NC_015733.1_2367685_2370202_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|1600aa|down_7|NC_015733.1_2370209_2375009_-	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting	NA|309aa|down_8|NC_015733.1_2375332_2376259_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|142aa|down_9|NC_015733.1_2378076_2378502_+	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins
GCF_000219705.1_ASM21970v1	NC_015733	Pseudomonas putida S16, complete sequence	3	4259650-4259737	3	CRISPRCasFinder	no		RT,WYL,DEDDh,csa3,casR,DinG,cas3	Orphan	AGCGCCGCGCGGGCGGCGCTCGGTCT	26	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,csa3,casR,DinG,cas3	NA,NA|98aa|down_1|NC_015733.1_4261426_4261720_-	NA|564aa|up_9|NC_015733.1_4248003_4249695_-	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|102aa|up_8|NC_015733.1_4249703_4250009_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|151aa|up_7|NC_015733.1_4250200_4250653_-	PRK05689, fliJ, flagella biosynthesis chaperone FliJ	NA|452aa|up_6|NC_015733.1_4250659_4252015_-	PRK05688, fliI, flagellar protein export ATPase FliI	NA|261aa|up_5|NC_015733.1_4252004_4252787_-	PRK05687, fliH, flagellar assembly protein FliH	NA|340aa|up_4|NC_015733.1_4252948_4253968_-	PRK05686, fliG, flagellar motor switch protein G; Validated	NA|593aa|up_3|NC_015733.1_4253960_4255739_-	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|111aa|up_2|NC_015733.1_4255754_4256087_-	PRK00253, fliE, flagellar hook-basal body protein FliE; Reviewed	NA|452aa|up_1|NC_015733.1_4256304_4257660_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|399aa|up_0|NC_015733.1_4257659_4258856_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|492aa|down_0|NC_015733.1_4259781_4261257_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|98aa|down_1|NC_015733.1_4261426_4261720_-	NA	NA|132aa|down_2|NC_015733.1_4261737_4262133_-	PRK05685, fliS, flagellar export chaperone FliS	NA|452aa|down_3|NC_015733.1_4262213_4263569_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|117aa|down_4|NC_015733.1_4263647_4263998_-	pfam03646, FlaG, FlaG protein	NA|673aa|down_5|NC_015733.1_4264074_4266093_-	PRK08869, PRK08869, polar flagellin E	NA|328aa|down_6|NC_015733.1_4266930_4267914_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|310aa|down_7|NC_015733.1_4268140_4269070_-	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems	NA|522aa|down_8|NC_015733.1_4269491_4271057_-	PRK12717, flgL, flagellar hook-associated protein 3	NA|681aa|down_9|NC_015733.1_4271070_4273113_-	PRK05683, flgK, flagellar hook-associated protein FlgK; Validated
