The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1625	12922	3783444		Rhizobium_phage(16.67%)	6	NA	NA
WP_013964214.1|1625_2741_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	34.1	4.7e-41
WP_013964215.1|2823_5244_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	35.0	3.7e-115
WP_156796957.1|5367_8253_+	DEAD/DEAH box helicase	NA	A0A2H4J643	uncultured_Caudovirales_phage	42.4	1.5e-211
WP_013964217.1|8252_10058_+	AIPR family protein	NA	D0UIM0	Aggregatibacter_phage	28.0	8.2e-43
WP_013964219.1|10181_11237_+	DUF1016 domain-containing protein	NA	Q9JMP5	Wolbachia_phage	31.4	2.4e-34
WP_013964220.1|11233_12922_+	site-specific DNA-methyltransferase	NA	A0A0F6R5U4	Escherichia_coli_O157_typing_phage	48.0	8.3e-98
>prophage 2
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	165222	209359	3783444	transposase,protease	Staphylococcus_phage(27.27%)	36	NA	NA
WP_013964348.1|165222_166287_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_013964349.1|166509_167793_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_013964350.1|168202_168802_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.7	5.5e-28
WP_013964351.1|168824_169925_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	35.1	1.7e-51
WP_013964352.1|169988_170471_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	41.9	2.3e-21
WP_013964353.1|170467_170968_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_013964354.1|170980_171952_+	thiamine-phosphate kinase	NA	NA	NA	NA	NA
WP_013964355.1|171932_172481_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
WP_013964356.1|172510_172711_-	YbdD/YjiX family protein	NA	NA	NA	NA	NA
WP_013964357.1|172729_174802_-	carbon starvation protein A	NA	NA	NA	NA	NA
WP_013964358.1|174853_176236_-	SLC13/DASS family transporter	NA	NA	NA	NA	NA
WP_013964359.1|176625_178128_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_013964360.1|178146_179190_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_013964361.1|179521_180769_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	61.1	2.8e-10
WP_013964362.1|180982_181186_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	78.8	2.0e-22
WP_013964363.1|181474_181783_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.7	2.8e-12
WP_013964364.1|181784_184043_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.6	2.9e-162
WP_013964365.1|184274_185627_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_013964369.1|189145_190108_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	53.5	1.4e-81
WP_013964371.1|191067_192315_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	50.9	1.3e-92
WP_013964372.1|192381_192840_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_013964373.1|192948_194040_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	34.9	2.7e-49
WP_013964374.1|194051_194612_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_013964375.1|194617_195877_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_013964376.1|196207_197326_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA	NA
WP_013964377.1|197428_198373_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
WP_013964378.1|198358_199486_-	glycine oxidase ThiO	NA	NA	NA	NA	NA
WP_156796964.1|199770_200274_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_013964380.1|200267_200780_+	type IV pilus modification protein PilV	NA	NA	NA	NA	NA
WP_013964381.1|200816_201575_+	PilW family protein	NA	NA	NA	NA	NA
WP_156797135.1|201574_202141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964383.1|202175_205688_+	pilus protein PilC	NA	NA	NA	NA	NA
WP_013964384.1|205794_206253_+	type IV pilin protein	NA	NA	NA	NA	NA
WP_013964385.1|206287_206995_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_041360025.1|207066_207729_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_013964387.1|208054_209359_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.9	1.0e-34
>prophage 3
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	245921	307752	3783444	transposase,integrase,tRNA	Acinetobacter_phage(16.67%)	58	248919:248934	304612:304627
WP_013964422.1|245921_247556_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013964423.1|247571_248774_-	murein transglycosylase A	NA	NA	NA	NA	NA
248919:248934	attL	GATGATGAAAACAAAG	NA	NA	NA	NA
WP_013964424.1|249002_249749_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_041360028.1|249820_250966_+	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	27.5	1.7e-22
WP_013964426.1|251006_252659_+	membrane protein	NA	NA	NA	NA	NA
WP_013964427.1|252881_253169_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013964428.1|253299_254187_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	39.6	1.6e-55
WP_013964429.1|254495_254906_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_013964430.1|254902_255583_+	protein TolQ	NA	NA	NA	NA	NA
WP_013964431.1|255602_256016_+	protein TolR	NA	NA	NA	NA	NA
WP_013964432.1|256026_257067_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_041360443.1|257114_258413_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_013964434.1|258442_258961_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_013964435.1|258963_259869_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_013964436.1|259969_260626_+	7-carboxy-7-deazaguanine synthase QueE	NA	NA	NA	NA	NA
WP_013964437.1|260643_261324_+	7-cyano-7-deazaguanine synthase QueC	NA	E7DN66	Pneumococcus_phage	38.2	2.5e-29
WP_041360031.1|262078_262501_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_013964439.1|262570_262894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964440.1|263017_265069_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_013964441.1|265183_267445_+	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_156796965.1|267705_271128_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_013964443.1|271141_271468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964444.1|271652_273710_-	sodium-translocating pyrophosphatase	NA	NA	NA	NA	NA
WP_013964445.1|273943_275203_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_041360033.1|275351_276005_-	adenylate kinase	NA	NA	NA	NA	NA
WP_013964447.1|276221_277286_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	64.3	6.8e-114
WP_013964448.1|277291_277750_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_013964449.1|277746_278112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964450.1|278108_280706_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	38.9	4.1e-80
WP_041360035.1|280833_283476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041360037.1|283733_284669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964451.1|284699_285038_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_013964452.1|285480_286779_+|integrase	integrase family protein	integrase	NA	NA	NA	NA
WP_013964453.1|286820_287147_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	48.8	5.8e-16
WP_013964454.1|287143_287446_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	40.0	1.7e-06
WP_013964455.1|287492_288179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156796966.1|288317_288539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964457.1|288538_289108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964458.1|289181_289649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964459.1|289645_290629_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_013964460.1|290625_291027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964461.1|291181_291706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964462.1|291819_292017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964463.1|292077_292686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964464.1|292722_292941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360448.1|293503_295495_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.3	5.9e-34
WP_013964466.1|295832_297632_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	1.3e-64
WP_013964467.1|297730_298177_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	48.8	1.3e-21
WP_013964468.1|298276_298489_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_156796967.1|299628_300793_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	41.5	6.0e-55
WP_013964471.1|301051_301651_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_013964472.1|302182_303424_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_013964473.1|303764_304073_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013964474.1|304212_304572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156796968.1|304814_305983_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	42.8	7.6e-58
304612:304627	attR	GATGATGAAAACAAAG	NA	NA	NA	NA
WP_013964476.1|306178_306640_-	PA2169 family four-helix-bundle protein	NA	NA	NA	NA	NA
WP_049785322.1|307020_307251_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_049785323.1|307344_307752_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	316035	378789	3783444	transposase,integrase,protease	Erysipelothrix_phage(21.43%)	46	374436:374452	382623:382639
WP_156796972.1|316035_317263_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_156797139.1|317231_317429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964488.1|317903_318104_-	YbdD/YjiX family protein	NA	NA	NA	NA	NA
WP_013964489.1|318152_320192_-	carbon starvation protein A	NA	NA	NA	NA	NA
WP_013964491.1|320473_320902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964492.1|321069_321819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083817932.1|322361_323990_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_013964494.1|324096_325389_+	cache sensor protein	NA	NA	NA	NA	NA
WP_083817933.1|325352_326300_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_083817934.1|326524_327730_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_013964497.1|327899_328955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049785325.1|329125_329632_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	59.4	5.3e-40
WP_013964498.1|329821_330862_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_013964369.1|331718_332681_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	53.5	1.4e-81
WP_013964499.1|333933_334755_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	38.9	1.2e-41
WP_156796973.1|336781_336946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964501.1|337076_337463_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964502.1|337674_338346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964503.1|338396_338591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964504.1|339010_340813_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_041360049.1|340833_342156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964506.1|342531_343875_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_013964507.1|345180_345813_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA	NA
WP_013964508.1|346002_346605_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_041360054.1|346944_347316_+	DUF393 domain-containing protein	NA	NA	NA	NA	NA
WP_049785326.1|347858_349142_-	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_013964512.1|349599_349869_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_013964513.1|350709_351618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964514.1|351683_352691_-	YqaJ viral recombinase family protein	NA	A0A139ZPJ9	Marinitoga_camini_virus	47.9	8.9e-47
WP_013964515.1|352802_353771_-	DUF932 domain-containing protein	NA	A0A0H4INH5	Stenotrophomonas_phage	41.8	4.1e-57
WP_013964516.1|353918_354245_-	membrane protein	NA	NA	NA	NA	NA
WP_013964517.1|354856_358102_+	helicase	NA	A0A2K5B253	Erysipelothrix_phage	46.6	2.1e-275
WP_013964518.1|358094_358895_+	DUF4391 domain-containing protein	NA	NA	NA	NA	NA
WP_041360458.1|358945_360970_+	site-specific DNA-methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	36.4	3.3e-101
WP_013964520.1|360982_362668_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_013964521.1|362675_365732_+	DEAD/DEAH box helicase	NA	A0A2K5B256	Erysipelothrix_phage	39.2	1.1e-183
WP_083817935.1|366048_366261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964524.1|366345_367053_-	pirin family protein	NA	NA	NA	NA	NA
WP_013964525.1|367606_368773_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_013964526.1|369913_371218_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.8	9.1e-36
WP_013964527.1|371420_371684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013964528.1|371977_372583_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A2H4J538	uncultured_Caudovirales_phage	36.7	2.2e-21
WP_013964529.1|372579_373971_+	DNA polymerase III subunit epsilon	NA	G3MAD3	Bacillus_virus	34.6	3.6e-14
WP_013964530.1|373963_375256_+	Y-family DNA polymerase	NA	A0A2H4JBL5	uncultured_Caudovirales_phage	45.6	5.4e-105
374436:374452	attL	CCAAAAAGAATCCTGAG	NA	NA	NA	NA
WP_013964531.1|375301_375802_-	ribonuclease H	NA	NA	NA	NA	NA
WP_013964533.1|377571_378789_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A077KET4	Ralstonia_phage	38.1	7.4e-72
382623:382639	attR	CTCAGGATTCTTTTTGG	NA	NA	NA	NA
>prophage 5
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	475735	486836	3783444	tRNA	Acanthamoeba_polyphaga_mimivirus(16.67%)	9	NA	NA
WP_013964628.1|475735_478246_-	DNA topoisomerase III	NA	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	24.8	1.1e-21
WP_041360075.1|478410_478869_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_013964630.1|478933_480034_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	38.5	1.6e-25
WP_013964631.1|480052_481087_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	50.0	1.5e-09
WP_041360077.1|481194_481698_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.8	1.1e-16
WP_013964633.1|481822_482782_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	26.5	2.7e-08
WP_013964634.1|482774_484052_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_156796982.1|484014_484659_+	DUF4390 domain-containing protein	NA	NA	NA	NA	NA
WP_013964636.1|484658_486836_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	25.6	5.5e-09
>prophage 6
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1033880	1099123	3783444	transposase,tail,tRNA	Ostreococcus_lucimarinus_virus(25.0%)	54	NA	NA
WP_013965106.1|1033880_1034642_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_013965107.1|1034580_1035405_-	thiazole synthase	NA	NA	NA	NA	NA
WP_013965108.1|1035452_1035656_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_156797013.1|1036041_1036608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965110.1|1036885_1037875_-	calcium-binding protein	NA	NA	NA	NA	NA
WP_013965111.1|1040120_1041599_+|transposase	ISNCY-like element ISNtsp2 family transposase	transposase	NA	NA	NA	NA
WP_041360563.1|1043160_1044372_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_013965113.1|1044625_1045117_+	CDP-archaeol synthase	NA	NA	NA	NA	NA
WP_013965114.1|1045123_1046059_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_156797157.1|1046522_1049747_+	helicase SNF2	NA	A0A0P0CJA9	Ostreococcus_lucimarinus_virus	30.4	4.0e-40
WP_041360144.1|1049930_1050299_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013965117.1|1050315_1051635_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_013965118.1|1051789_1052227_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_013965119.1|1052438_1053254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965121.1|1053396_1055001_-	ABC-F family ATPase	NA	A0A2K9L3Z8	Tupanvirus	26.7	2.0e-53
WP_013965122.1|1055296_1055746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156797158.1|1055985_1056561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965124.1|1056974_1059188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965125.1|1059340_1060600_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_156797159.1|1061789_1061885_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_013965127.1|1062117_1062546_-	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_041360148.1|1062535_1062760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965129.1|1062823_1063786_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_013965130.1|1064135_1065428_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_013965131.1|1065498_1066395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965133.1|1066820_1067168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049785335.1|1067591_1068155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965136.1|1068497_1068833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965137.1|1069243_1069738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965138.1|1069818_1070046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965139.1|1070319_1071597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360152.1|1074053_1074464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965142.1|1074676_1075399_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_013965143.1|1075478_1076141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797014.1|1076210_1076405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965144.1|1076461_1076998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965145.1|1078982_1080641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965146.1|1081112_1081973_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_013965147.1|1082089_1083190_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	3.6e-25
WP_041360154.1|1083186_1084065_-	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
WP_013965149.1|1084073_1084907_-	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
WP_013965150.1|1084957_1085782_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_013965151.1|1085882_1086224_-	DUF2325 domain-containing protein	NA	NA	NA	NA	NA
WP_013965152.1|1086272_1087271_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013965153.1|1087302_1088973_-	alginate export family protein	NA	NA	NA	NA	NA
WP_013965154.1|1089118_1089340_-	YezD family protein	NA	NA	NA	NA	NA
WP_041360573.1|1089665_1090058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965156.1|1090079_1091186_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_013965157.1|1091842_1092430_+	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_013965158.1|1092426_1093290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965159.1|1093321_1095256_+|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	32.7	1.2e-39
WP_013965160.1|1095267_1095720_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_013965161.1|1095725_1098653_+|tail	phage tail sheath family protein	tail	NA	NA	NA	NA
WP_013965162.1|1098655_1099123_+|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 7
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1279234	1383502	3783444	transposase,tail	Acidithiobacillus_phage(12.5%)	85	NA	NA
WP_013965305.1|1279234_1280539_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.9	5.9e-35
WP_041360180.1|1280845_1281145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965306.1|1281233_1287272_-	DUF4214 domain-containing protein	NA	NA	NA	NA	NA
WP_013965307.1|1287514_1288480_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_156797026.1|1288586_1289318_-|tail	phage tail protein	tail	A0A2R3ZZT3	Microbacterium_phage	40.0	5.0e-07
WP_013965309.1|1289550_1290780_+	DUF697 domain-containing protein	NA	NA	NA	NA	NA
WP_013965310.1|1290776_1292330_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_013965311.1|1292403_1293165_+	DUF3750 domain-containing protein	NA	NA	NA	NA	NA
WP_013965312.1|1293281_1294295_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013965313.1|1294399_1296001_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_049785410.1|1296011_1297061_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.0	4.6e-22
WP_013965315.1|1297286_1297613_+	thioredoxin TrxA	NA	A0A1J0GW78	Streptomyces_phage	45.6	6.2e-18
WP_013965316.1|1297760_1299020_+	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_013965317.1|1299259_1299472_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_013965318.1|1299588_1299909_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_013965319.1|1299954_1300959_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	30.7	1.1e-41
WP_156796972.1|1301869_1303098_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_156797027.1|1303032_1303758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965320.1|1303827_1304640_+	polysaccharide export protein EpsE	NA	NA	NA	NA	NA
WP_013965321.1|1304719_1306087_+	chain length determinant protein EpsF	NA	NA	NA	NA	NA
WP_013965322.1|1306121_1307024_+	chain length determinant protein tyrosine kinase EpsG	NA	NA	NA	NA	NA
WP_013965323.1|1307046_1307940_+	exosortase B	NA	NA	NA	NA	NA
WP_013965324.1|1308077_1308764_+	EpsI family protein	NA	NA	NA	NA	NA
WP_013965325.1|1308923_1309553_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_013965326.1|1309735_1311289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965327.1|1311405_1312143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965328.1|1312406_1313279_+	sulfotransferase	NA	NA	NA	NA	NA
WP_083817946.1|1313193_1314057_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_013965330.1|1314203_1315121_+	sulfotransferase	NA	NA	NA	NA	NA
WP_083817947.1|1315461_1315614_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013965331.1|1315711_1316848_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_013965332.1|1317070_1317739_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_013965333.1|1317860_1319165_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.5	1.7e-34
WP_013965334.1|1319416_1321054_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_049785340.1|1321050_1321374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013964263.1|1323014_1323305_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_049785394.1|1323331_1323643_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_013964261.1|1323692_1325276_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	41.6	2.6e-93
WP_013964644.1|1325414_1325918_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_156797142.1|1326293_1326410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797166.1|1327483_1328632_-	glycoside hydrolase	NA	NA	NA	NA	NA
WP_156797028.1|1328786_1329032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049785341.1|1331043_1331841_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_013965341.1|1332278_1333799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965342.1|1333795_1335010_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_156797029.1|1335270_1335846_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_041360195.1|1335877_1336594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965344.1|1338156_1342269_+	Ig family protein	NA	NA	NA	NA	NA
WP_013965345.1|1342843_1343935_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_013965346.1|1343977_1344367_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_013965347.1|1344442_1345795_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	M4QFZ1	Prochlorococcus_phage	34.4	2.6e-49
WP_013965348.1|1345832_1346327_+	thiol peroxidase	NA	NA	NA	NA	NA
WP_013965349.1|1346349_1347801_+	glycine dehydrogenase subunit 2	NA	E3ST28	Prochlorococcus_phage	40.6	2.5e-82
WP_013965350.1|1347924_1348860_+	carbohydrate kinase family protein	NA	NA	NA	NA	NA
WP_013965351.1|1348966_1349500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965352.1|1349601_1350450_-	endonuclease	NA	NA	NA	NA	NA
WP_013965353.1|1350722_1351148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965354.1|1351164_1351713_+	glycine zipper family protein	NA	NA	NA	NA	NA
WP_156797167.1|1351787_1352339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965356.1|1352458_1353268_-	methane monooxygenase/ammonia monooxygenase subunit C	NA	NA	NA	NA	NA
WP_013965357.1|1353539_1354214_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	29.1	5.2e-11
WP_013965358.1|1354223_1356131_-	PAS domain-containing protein	NA	A0A2K9L5I4	Tupanvirus	23.0	3.9e-11
WP_013965359.1|1356287_1358684_-	PAS domain-containing hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
WP_013965360.1|1358792_1359455_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_013965361.1|1359451_1361326_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_013964369.1|1361702_1362665_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	53.5	1.4e-81
WP_013965363.1|1363213_1363945_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_041360199.1|1364001_1365060_+	GGDEF and EAL domain-containing protein	NA	NA	NA	NA	NA
WP_049785343.1|1365348_1365972_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.5	1.7e-16
WP_156796972.1|1365939_1367168_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_013965364.1|1367221_1367422_-	putative motility protein	NA	NA	NA	NA	NA
WP_156797168.1|1367575_1368139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965366.1|1368573_1368960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360670.1|1369404_1369797_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_013965369.1|1370470_1371334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965370.1|1372534_1374862_-	nitric oxide reductase activation protein NorD	NA	NA	NA	NA	NA
WP_013965371.1|1374919_1375726_-	CbbQ/NirQ/NorQ/GpvN family protein	NA	NA	NA	NA	NA
WP_013965372.1|1375833_1376190_-	ribulose bisphosphate carboxylase small subunit	NA	NA	NA	NA	NA
WP_013965373.1|1376269_1377691_-	form I ribulose bisphosphate carboxylase large subunit	NA	NA	NA	NA	NA
WP_013965374.1|1377882_1378797_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013965375.1|1378926_1379625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965376.1|1379656_1379884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965377.1|1380191_1381520_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_013965378.1|1381736_1382357_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_013964369.1|1382539_1383502_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	53.5	1.4e-81
>prophage 8
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1501277	1512310	3783444	integrase	Hokovirus(12.5%)	21	1495120:1495134	1505378:1505392
1495120:1495134	attL	TTTTTATCATCCTTC	NA	NA	NA	NA
WP_013965474.1|1501277_1502840_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.9	1.4e-19
WP_013965475.1|1503190_1504387_+|integrase	site-specific integrase	integrase	G9L697	Escherichia_phage	53.2	1.4e-120
WP_013965476.1|1504373_1504607_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_013965477.1|1504621_1504846_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965478.1|1504848_1505175_-	DUF4326 domain-containing protein	NA	A0A160DCT3	Gordonia_phage	40.5	1.9e-14
WP_013965479.1|1505174_1505378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965480.1|1505370_1505598_-	hypothetical protein	NA	NA	NA	NA	NA
1505378:1505392	attR	TTTTTATCATCCTTC	NA	NA	NA	NA
WP_013965481.1|1505581_1505770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965482.1|1505929_1506304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965483.1|1506346_1506874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965484.1|1506893_1507358_-	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	59.6	2.7e-43
WP_041360213.1|1507341_1507596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965485.1|1507592_1507865_-	hypothetical protein	NA	A0A2I7QVW8	Vibrio_phage	58.0	5.7e-09
WP_013965486.1|1507875_1508256_-	hypothetical protein	NA	A9YWV9	Burkholderia_phage	57.4	8.2e-38
WP_013965487.1|1508248_1508437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360217.1|1508429_1508627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965488.1|1508629_1509244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965489.1|1509236_1509800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965490.1|1509786_1510428_-	hypothetical protein	NA	A0A076G7C3	Sinorhizobium_phage	39.1	4.8e-30
WP_013965491.1|1510420_1510588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965492.1|1510591_1512310_-	AAA family ATPase	NA	H2BD46	Pseudomonas_phage	32.0	9.4e-65
>prophage 9
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1560934	1568515	3783444		uncultured_Mediterranean_phage(16.67%)	8	NA	NA
WP_013965564.1|1560934_1561405_+	thermonuclease family protein	NA	A0A1B1INA4	uncultured_Mediterranean_phage	34.2	1.2e-06
WP_156797039.1|1561528_1563385_+	hypothetical protein	NA	A0A2I7QP30	Vibrio_phage	42.7	4.0e-29
WP_013965566.1|1563391_1563763_+	hypothetical protein	NA	A0A291AUV3	Sinorhizobium_phage	43.9	6.6e-24
WP_013965567.1|1563759_1565643_+	hypothetical protein	NA	G9BW42	Planktothrix_phage	38.3	4.0e-08
WP_013965568.1|1565639_1567097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965569.1|1567128_1567839_-	DUF4393 domain-containing protein	NA	NA	NA	NA	NA
WP_013965570.1|1567932_1568322_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	51.5	8.4e-30
WP_041360738.1|1568332_1568515_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	53.4	1.8e-11
>prophage 10
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1663855	1722061	3783444	transposase,protease,tRNA	Escherichia_phage(25.0%)	52	NA	NA
WP_049785354.1|1663855_1664362_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_013965655.1|1664356_1665469_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_013965656.1|1665465_1666677_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_013965657.1|1666706_1667615_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA	NA
WP_013965658.1|1667704_1668730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965659.1|1668964_1670341_+	SLC13/DASS family transporter	NA	NA	NA	NA	NA
WP_013965660.1|1670309_1670885_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	NA	NA	NA	NA
WP_013965661.1|1670957_1671584_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	38.1	3.5e-25
WP_013965662.1|1671576_1672617_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_156797179.1|1672617_1673112_-	heme-binding protein	NA	NA	NA	NA	NA
WP_013965664.1|1673222_1673936_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_041360758.1|1674035_1674839_-	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	43.0	8.9e-42
WP_013965666.1|1674969_1675503_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013965667.1|1675561_1677199_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_083817989.1|1677602_1678613_-	formylglycine-generating enzyme family protein	NA	A0A7H6	Microcystis_virus	43.2	6.6e-42
WP_156797044.1|1680355_1681126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049785356.1|1681162_1681369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965669.1|1681382_1682810_-	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_013965670.1|1682875_1683211_-	HigA family addiction module antidote protein	NA	A0A2P1MXE5	Escherichia_phage	40.3	3.3e-06
WP_013965671.1|1683223_1683502_-	plasmid maintenance system killer	NA	A0A2L1IV28	Escherichia_phage	48.9	3.9e-21
WP_013965672.1|1683586_1684771_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_013965673.1|1684770_1685073_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_013964816.1|1685516_1686632_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_013965674.1|1686838_1687411_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_013965675.1|1687689_1687863_-	CsbD family protein	NA	NA	NA	NA	NA
WP_013965676.1|1688086_1689337_-	folate/biopterin family MFS transporter	NA	NA	NA	NA	NA
WP_013965677.1|1690441_1690867_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_013965678.1|1690926_1693047_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_013965679.1|1693183_1693453_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_013965680.1|1693786_1694806_-	PstS family phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013965681.1|1695032_1696790_-	porin	NA	NA	NA	NA	NA
WP_013964653.1|1697139_1697949_+	methane monooxygenase/ammonia monooxygenase subunit C	NA	NA	NA	NA	NA
WP_013965682.1|1698104_1698542_+	membrane protein	NA	NA	NA	NA	NA
WP_013965683.1|1699071_1699599_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_013965684.1|1699602_1700430_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_013965685.1|1700447_1701149_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_013965686.1|1701138_1702032_+	tyrosine recombinase XerC	NA	A0A1B3B212	Gordonia_phage	28.4	1.6e-07
WP_013965687.1|1702111_1702633_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_013965688.1|1702754_1704086_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.3	1.3e-42
WP_013965689.1|1704225_1704912_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_013965690.1|1705181_1705505_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_013965691.1|1705644_1707432_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_013965692.1|1707449_1707893_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_013965693.1|1707902_1709171_-	SulP family inorganic anion transporter	NA	NA	NA	NA	NA
WP_013965694.1|1709354_1709588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965695.1|1709887_1710937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965696.1|1710979_1712485_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_013965697.1|1712486_1714079_-	proton-translocating NADH-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_013965698.1|1714086_1715655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965699.1|1715656_1718932_-	DUF2309 domain-containing protein	NA	NA	NA	NA	NA
WP_013965700.1|1718942_1720415_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_013965701.1|1721026_1722061_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.4	1.9e-44
>prophage 11
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	1864224	1940049	3783444	transposase,tRNA	Tupanvirus(16.67%)	60	NA	NA
WP_041360791.1|1864224_1865616_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_013965825.1|1865816_1867403_+	acyl-CoA ligase (AMP-forming), exosortase A system-associated	NA	A0A2K9KZV5	Tupanvirus	25.0	2.1e-26
WP_013965826.1|1867399_1868635_+	pyridoxal-dependent decarboxylase, exosortase A system-associated	NA	NA	NA	NA	NA
WP_013965827.1|1869075_1869846_+	PEP-CTERM/exosortase system-associated acyltransferase	NA	NA	NA	NA	NA
WP_156797182.1|1869977_1870361_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041360264.1|1870329_1871739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965830.1|1871755_1874668_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_013965831.1|1874865_1876263_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_041360795.1|1876286_1877624_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	NA	NA	NA	NA
WP_041360796.1|1877796_1879131_+	DUF3422 family protein	NA	NA	NA	NA	NA
WP_013965834.1|1879396_1880773_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	49.6	1.1e-119
WP_013965835.1|1880912_1881506_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_013965836.1|1881573_1883508_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	48.7	3.1e-149
WP_013965837.1|1883655_1884768_+	molecular chaperone DnaJ	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	38.1	1.6e-25
WP_013965838.1|1885124_1886534_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.9	6.4e-35
WP_013964644.1|1888862_1889366_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_156797142.1|1889741_1889858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360267.1|1889914_1890190_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_013964469.1|1890186_1890480_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_013965840.1|1890502_1891396_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_013965842.1|1892577_1893996_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.5	6.4e-35
WP_013965843.1|1894480_1894735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965844.1|1894740_1895169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965847.1|1898140_1899253_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA	NA
WP_013965848.1|1899406_1899604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965849.1|1899803_1900382_+	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_013965850.1|1900725_1901619_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.7	3.6e-68
WP_013965851.1|1901697_1902723_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	44.0	1.2e-78
WP_013965852.1|1902798_1903755_-	DHH family phosphoesterase	NA	NA	NA	NA	NA
WP_013965853.1|1903827_1905738_-	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	30.2	2.8e-33
WP_013965854.1|1905737_1906634_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_013965855.1|1908117_1909248_-	DUF3616 domain-containing protein	NA	NA	NA	NA	NA
WP_013965856.1|1909981_1910587_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_156797048.1|1912207_1912483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965858.1|1912524_1913292_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_013965859.1|1913297_1913675_-	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
WP_013965860.1|1913689_1915798_-|tRNA	methionine--tRNA ligase	tRNA	A0A2K9KZB8	Tupanvirus	35.1	9.3e-06
WP_013965861.1|1915921_1917010_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_013965862.1|1917023_1917590_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	74.1	2.6e-72
WP_041360810.1|1917628_1918888_+	TIGR03790 family protein	NA	NA	NA	NA	NA
WP_013965864.1|1919254_1920430_+	type III PLP-dependent enzyme	NA	A0A060D2X4	Bovine_gammaherpesvirus	38.1	4.2e-56
WP_013965865.1|1920546_1921065_-	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	42.1	5.1e-30
WP_013965866.1|1921061_1921856_-	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	65.2	9.0e-103
WP_013965867.1|1922025_1923483_+	leucyl aminopeptidase family protein	NA	NA	NA	NA	NA
WP_013965868.1|1923505_1924795_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A172JIA8	Bacillus_phage	33.6	2.7e-08
WP_013965869.1|1924950_1925370_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	53.5	7.5e-24
WP_013965870.1|1925464_1929010_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_013965871.1|1929096_1930281_+	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_013965872.1|1930532_1930778_+	CDGSH iron-sulfur domain-containing protein	NA	NA	NA	NA	NA
WP_013965873.1|1930912_1931110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965874.1|1931102_1931402_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_013965875.1|1931682_1932309_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_013965876.1|1932348_1933002_-	thiol-disulfide isomerase	NA	NA	NA	NA	NA
WP_041360276.1|1933101_1933557_+	EVE domain-containing protein	NA	NA	NA	NA	NA
WP_013965878.1|1933606_1934404_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_041360277.1|1934674_1934926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797049.1|1934947_1935100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013965879.1|1935240_1937142_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	31.7	4.8e-17
WP_013965880.1|1937452_1938448_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_013965881.1|1938744_1940049_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.8	1.3e-34
>prophage 12
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2061375	2133567	3783444	integrase,transposase,tRNA,protease	Hokovirus(15.79%)	59	2115484:2115504	2133579:2133599
WP_013965978.1|2061375_2061816_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
WP_013965979.1|2062263_2063130_-	phospholipase/carboxylesterase	NA	NA	NA	NA	NA
WP_013965980.1|2063476_2064124_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_013965981.1|2064479_2065787_+	alkyl/aryl-sulfatase	NA	A0A1V0SGC6	Hokovirus	29.2	3.4e-30
WP_013965982.1|2066086_2067346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965983.1|2067632_2068232_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_013965984.1|2068668_2069424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013965985.1|2069472_2071884_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	49.7	1.9e-204
WP_013965986.1|2072036_2073314_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.1	7.6e-136
WP_013965987.1|2073380_2074022_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	53.8	6.2e-54
WP_013965988.1|2074023_2075328_-	trigger factor	NA	NA	NA	NA	NA
WP_013965989.1|2075591_2076338_-	YciK family oxidoreductase	NA	NA	NA	NA	NA
WP_013965990.1|2076499_2078152_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	60.3	5.0e-172
WP_013965991.1|2078209_2078500_-	co-chaperone GroES	NA	A0A221S322	uncultured_virus	46.8	3.2e-18
WP_013965992.1|2078877_2080044_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_013965993.1|2080635_2082030_-	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	23.7	6.6e-16
WP_013965994.1|2082073_2084515_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.7	1.8e-13
WP_013965995.1|2084935_2085970_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.2	1.6e-43
WP_013965996.1|2086548_2087292_-	CADD family putative folate metabolism protein	NA	NA	NA	NA	NA
WP_013965997.1|2087368_2089663_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_013965998.1|2089768_2090668_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041360298.1|2090682_2092665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966000.1|2093259_2093679_+	DedA family protein	NA	NA	NA	NA	NA
WP_013966001.1|2093745_2094054_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_013966002.1|2094139_2094976_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_013966003.1|2094998_2096078_-	peptide chain release factor 1	NA	G0YKC3	Acinetobacter_phage	46.4	1.8e-05
WP_013966004.1|2096074_2097328_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_013966005.1|2097457_2097958_-	CreA family protein	NA	NA	NA	NA	NA
WP_013966006.1|2098431_2099211_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_013966007.1|2099548_2099992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966008.1|2100068_2101529_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.7	9.8e-47
WP_013966009.1|2101628_2102681_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_013966010.1|2102683_2103061_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_013966011.1|2103057_2103783_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_013966012.1|2103831_2104725_-	GTPase Era	NA	NA	NA	NA	NA
WP_013966013.1|2104763_2105480_-	ribonuclease III	NA	A0A1C9C5A7	Heterosigma_akashiwo_virus	35.1	2.8e-18
WP_013966014.1|2105494_2105866_-	DUF4845 domain-containing protein	NA	NA	NA	NA	NA
WP_013966015.1|2105900_2106704_-	signal peptidase I	NA	NA	NA	NA	NA
WP_013966017.1|2106795_2108589_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.7	1.1e-23
WP_013966018.1|2108690_2108981_-	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_013966019.1|2108964_2110380_-|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.8	2.7e-25
WP_013966020.1|2110621_2111626_-	sigma E regulatory protein, MucB/RseB	NA	NA	NA	NA	NA
WP_013966021.1|2111622_2112171_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_013966022.1|2112172_2112772_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	25.9	7.7e-06
WP_013966023.1|2113048_2114647_+	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_156797056.1|2114794_2115331_+	MEKHLA domain-containing protein	NA	NA	NA	NA	NA
2115484:2115504	attL	ACTATCAAATTGACTATCAAA	NA	NA	NA	NA
WP_013966027.1|2118274_2118433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797057.1|2118624_2118741_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083817957.1|2118858_2118951_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_013966028.1|2118947_2120735_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_013966029.1|2120750_2122814_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	25.1	3.1e-30
WP_013966030.1|2122833_2123409_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_013966031.1|2123408_2126078_+	sensor histidine kinase KdpD	NA	A0A1V0SGX0	Hokovirus	27.4	1.1e-16
WP_013966032.1|2126074_2126758_+	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	29.6	2.7e-07
WP_013966033.1|2126945_2128607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966034.1|2128649_2129195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797058.1|2130048_2130468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083817959.1|2130471_2130765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966036.1|2132310_2133567_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A077KET4	Ralstonia_phage	45.1	1.3e-95
2133579:2133599	attR	ACTATCAAATTGACTATCAAA	NA	NA	NA	NA
>prophage 13
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2266398	2275775	3783444		Burkholderia_phage(28.57%)	9	NA	NA
WP_013966163.1|2266398_2266731_-	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	48.1	1.3e-15
WP_013966164.1|2266714_2266972_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	55.3	1.2e-19
WP_013966165.1|2267577_2267760_-	hypothetical protein	NA	A0A2H4J2N9	uncultured_Caudovirales_phage	58.2	9.4e-08
WP_013966166.1|2267867_2268545_-	DUF4145 domain-containing protein	NA	M1PSB6	Streptococcus_phage	31.0	8.9e-27
WP_156797186.1|2268628_2269777_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2D2W228	Stenotrophomonas_phage	29.8	5.6e-37
WP_013966168.1|2269859_2272724_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	44.4	7.8e-173
WP_013966169.1|2273382_2274174_-	carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_013966170.1|2274213_2274450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966171.1|2274602_2275775_-	type III PLP-dependent enzyme	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	32.0	5.5e-40
>prophage 14
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2404035	2458175	3783444	transposase,tRNA	Ralstonia_phage(33.33%)	36	NA	NA
WP_013966291.1|2404035_2405652_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_013966292.1|2406023_2407331_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	37.3	1.0e-34
WP_013966293.1|2407480_2408203_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	36.2	8.9e-33
WP_013966294.1|2408297_2408708_+	DUF971 domain-containing protein	NA	NA	NA	NA	NA
WP_013966295.1|2408800_2409535_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_013966296.1|2410060_2412484_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_013966297.1|2412483_2413929_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_013966299.1|2414393_2415656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966300.1|2416037_2417117_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_013966301.1|2417121_2417577_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_013966302.1|2417714_2419517_-	response regulator	NA	Q8QKV7	Ectocarpus_siliculosus_virus	36.2	1.3e-51
WP_013966304.1|2421967_2422204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966305.1|2422543_2424355_-	cytochrome c	NA	NA	NA	NA	NA
WP_013966306.1|2424351_2425494_-	catalase family protein	NA	NA	NA	NA	NA
WP_013966307.1|2425959_2427273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966308.1|2427764_2428526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966309.1|2428522_2429392_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_156797189.1|2429979_2430942_+	DUF3616 domain-containing protein	NA	NA	NA	NA	NA
WP_013966311.1|2431138_2431426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041360323.1|2431422_2431833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966313.1|2431935_2433315_-	zinc chelation protein SecC	NA	NA	NA	NA	NA
WP_013966314.1|2433547_2434510_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	53.2	5.3e-81
WP_013966315.1|2436578_2437544_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA	NA
WP_156796972.1|2437774_2439002_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_013966317.1|2439598_2440177_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_013966318.1|2440406_2440733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966319.1|2440937_2442782_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_013964369.1|2444792_2445755_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	53.5	1.4e-81
WP_156797068.1|2446236_2447910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966321.1|2448148_2449711_-	thiol oxidoreductase	NA	NA	NA	NA	NA
WP_013966322.1|2450372_2451116_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	46.6	7.0e-41
WP_013966323.1|2451389_2451860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966324.1|2451988_2452981_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_013966326.1|2453794_2454265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156796972.1|2454648_2455877_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_013966327.1|2457212_2458175_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	52.5	1.2e-80
>prophage 15
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2561150	2577989	3783444	capsid,portal,protease,head,terminase	Azospirillum_phage(18.18%)	26	NA	NA
WP_013966425.1|2561150_2562083_-	hypothetical protein	NA	K7XS75	uncultured_Mediterranean_phage	40.6	2.2e-52
WP_013966426.1|2562095_2562440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966427.1|2562454_2562937_-	phage protein, HK97 gp10 family	NA	NA	NA	NA	NA
WP_013966428.1|2562926_2563274_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_083817965.1|2563274_2563850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966430.1|2563901_2564177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966431.1|2564190_2564406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966432.1|2564479_2564902_-	hypothetical protein	NA	B0VK34	Azospirillum_phage	67.1	9.4e-43
WP_013966433.1|2564972_2566346_-|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	32.0	2.8e-51
WP_013966434.1|2566361_2567060_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2D1GNL2	Pseudomonas_phage	41.3	2.1e-23
WP_013966435.1|2567052_2568351_-|portal	phage portal protein	portal	B0VK31	Azospirillum_phage	46.0	6.8e-92
WP_013966436.1|2568365_2570090_-|terminase	terminase large subunit	terminase	A0A141GEV8	Brucella_phage	44.3	7.4e-126
WP_013966437.1|2570074_2570593_-|terminase	phage terminase small subunit P27 family	terminase	A0A1B0RXG3	Streptococcus_phage	35.6	6.4e-17
WP_013966438.1|2570687_2571113_-	HNH endonuclease	NA	Q38456	Bacillus_phage	52.7	1.7e-28
WP_013966439.1|2571236_2571662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966440.1|2571675_2571882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966441.1|2571871_2572099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360334.1|2572091_2572397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966442.1|2572380_2574750_-	virulence-associated E family protein	NA	A0A2D1GN57	Marinobacter_phage	39.7	2.1e-75
WP_013966443.1|2574753_2575134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966444.1|2575133_2575463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966446.1|2575565_2576036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797077.1|2576303_2576585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360957.1|2576735_2576999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966449.1|2577123_2577504_+	helix-turn-helix domain-containing protein	NA	A0A0P0J076	Acinetobacter_phage	43.6	8.0e-17
WP_013966450.1|2577572_2577989_+	thermonuclease family protein	NA	A0A0R6PHV6	Moraxella_phage	36.2	3.2e-19
>prophage 16
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2609614	2685070	3783444	transposase,integrase,tRNA	Terra1_virus(14.29%)	54	2625110:2625130	2669557:2669577
WP_013966485.1|2609614_2610997_-|tRNA	cysteine--tRNA ligase	tRNA	F1C979	Terra1_virus	34.2	2.6e-41
WP_013966486.1|2611145_2611739_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_013966487.1|2611768_2612260_+	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	30.1	1.8e-08
WP_013966488.1|2612324_2613500_-	O-succinylhomoserine sulfhydrylase	NA	NA	NA	NA	NA
WP_013966489.1|2613613_2615134_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.8	7.8e-87
WP_013966490.1|2615253_2615760_-	CvpA family protein	NA	NA	NA	NA	NA
WP_013966491.1|2615861_2616551_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_013966492.1|2616567_2617872_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_013966493.1|2617930_2618800_-	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_041360973.1|2618836_2619637_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_013966495.1|2619765_2620965_-	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_013966496.1|2620961_2621579_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_013966497.1|2621604_2622402_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_083817997.1|2622466_2624932_-	fimbrial protein FimV	NA	NA	NA	NA	NA
2625110:2625130	attL	TTAACAGGCCGTTGAAAAACC	NA	NA	NA	NA
WP_013966499.1|2625278_2626391_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_013966500.1|2626549_2627611_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_013966501.1|2627637_2628276_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_013966502.1|2628292_2629702_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_013966503.1|2629781_2630930_-	MFS transporter	NA	NA	NA	NA	NA
WP_013966504.1|2631424_2631844_+	rubrerythrin	NA	NA	NA	NA	NA
WP_013966505.1|2631958_2633947_+	DUF3501 family protein	NA	NA	NA	NA	NA
WP_013966506.1|2633943_2634453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966507.1|2634548_2644187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360341.1|2644569_2644836_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_013966509.1|2644832_2645213_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_013966510.1|2645270_2645471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966511.1|2645691_2646222_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_156797079.1|2646595_2646793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083817966.1|2646835_2652796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049785373.1|2652713_2654636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156796972.1|2654803_2656032_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_013966513.1|2656775_2658149_+	ammonium transporter	NA	NA	NA	NA	NA
WP_013966514.1|2658216_2658576_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013966515.1|2658718_2659429_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_041360342.1|2659457_2659670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966517.1|2659765_2661718_-	alpha-amylase	NA	NA	NA	NA	NA
WP_156797194.1|2661736_2663899_-	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_013966519.1|2663901_2664816_-	carbohydrate kinase	NA	NA	NA	NA	NA
WP_013966520.1|2664841_2665345_-	HPP family protein	NA	NA	NA	NA	NA
WP_156797080.1|2665564_2667040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041360343.1|2668454_2669195_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_083817998.1|2669152_2669362_+|integrase	tyrosine-type recombinase/integrase	integrase	S6C485	Thermus_phage	45.8	1.6e-06
WP_013966523.1|2669753_2670842_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
2669557:2669577	attR	TTAACAGGCCGTTGAAAAACC	NA	NA	NA	NA
WP_013966524.1|2670940_2673277_-	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_013966525.1|2673305_2675399_-	transketolase	NA	NA	NA	NA	NA
WP_049785374.1|2675531_2676230_-	ROK family protein	NA	NA	NA	NA	NA
WP_013966527.1|2676364_2677783_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.2	3.2e-74
WP_013964241.1|2677784_2678807_-	decarboxylating 6-phosphogluconate dehydrogenase	NA	A0A1D8KG43	Synechococcus_phage	52.3	1.2e-91
WP_013966528.1|2679413_2679803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966529.1|2679898_2680783_-	YfdX family protein	NA	NA	NA	NA	NA
WP_013966530.1|2680972_2681449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966531.1|2681445_2681646_-	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_013966532.1|2681908_2683360_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_013966533.1|2683453_2685070_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2817780	2849702	3783444	transposase,integrase	Burkholderia_virus(20.0%)	32	2815023:2815038	2822563:2822578
2815023:2815038	attL	GGTTCGATTCCCGCCG	NA	NA	NA	NA
WP_013966650.1|2817780_2818866_+|integrase	site-specific integrase	integrase	A0A1W6JTA0	Pseudomonas_phage	41.6	6.8e-77
WP_013966651.1|2818902_2819205_+	type II toxin-antitoxin system HigB family toxin	NA	A0A0P0ZE17	Stx2-converting_phage	34.0	4.0e-11
WP_013966652.1|2819225_2819600_+	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	63.2	1.9e-34
WP_013966653.1|2819886_2822346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966654.1|2822711_2822870_+	hypothetical protein	NA	NA	NA	NA	NA
2822563:2822578	attR	GGTTCGATTCCCGCCG	NA	NA	NA	NA
WP_013966655.1|2822942_2823191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966656.1|2823752_2824457_-	glutaredoxin	NA	A0A248SKD6	Salicola_phage	41.7	3.1e-06
WP_013966657.1|2824642_2826373_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
WP_013966658.1|2826983_2827142_-	DUF3309 domain-containing protein	NA	NA	NA	NA	NA
WP_013966659.1|2827206_2827413_-	DUF3185 family protein	NA	NA	NA	NA	NA
WP_013966660.1|2827658_2828009_+	CsbD family protein	NA	NA	NA	NA	NA
WP_013966661.1|2828141_2828267_+	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_156796972.1|2828351_2829579_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_156796972.1|2831568_2832797_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.1	2.8e-127
WP_156797086.1|2833925_2834495_+	DUF1524 domain-containing protein	NA	A0A1S6L216	Vibrio_phage	43.2	4.1e-25
WP_013966664.1|2834710_2834986_+	GIY-YIG nuclease family protein	NA	A0A0S3IVI2	Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus	35.7	3.9e-05
WP_156797087.1|2835189_2835675_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966666.1|2835689_2836241_+	glycine zipper family protein	NA	NA	NA	NA	NA
WP_041361021.1|2836483_2837404_-	cation transporter	NA	NA	NA	NA	NA
WP_013966668.1|2837613_2837823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797088.1|2837986_2838142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966670.1|2838385_2839204_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_013966671.1|2839208_2840897_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_013966672.1|2841002_2841410_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013966673.1|2841474_2841915_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_041361026.1|2841940_2842369_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_013966675.1|2842475_2843336_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_049785375.1|2843470_2845933_+	plasma-membrane proton-efflux P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	26.1	4.8e-38
WP_013966677.1|2846160_2846484_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_013964263.1|2847440_2847731_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_049785394.1|2847757_2848069_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_013964261.1|2848118_2849702_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	41.6	2.6e-93
>prophage 18
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	2854358	2918944	3783444	transposase,integrase,tRNA	uncultured_Caudovirales_phage(30.77%)	55	2847367:2847426	2921227:2923584
2847367:2847426	attL	GTAAGCCTCCAATCCATCCACATTAACACCCTGATACGTCATCGCTATCCTCAAACCTTT	NA	NA	NA	NA
WP_013966683.1|2854358_2855321_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	52.8	3.6e-82
WP_013966686.1|2857579_2860726_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_013966687.1|2860727_2862320_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_156797196.1|2862344_2863676_-	TolC family protein	NA	NA	NA	NA	NA
WP_041361032.1|2863907_2864249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013966690.1|2864350_2865949_-	hypothetical protein	NA	A0A0N9QAZ1	Chrysochromulina_ericina_virus	24.5	8.6e-12
WP_013966691.1|2866023_2866488_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_013966692.1|2866497_2866974_-	DUF4396 domain-containing protein	NA	NA	NA	NA	NA
WP_013966693.1|2867532_2868348_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013966694.1|2868865_2869738_+	CoA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_013966695.1|2869741_2870776_+	RNA 3'-terminal phosphate cyclase	NA	NA	NA	NA	NA
WP_013966696.1|2870778_2871069_+	DUF504 domain-containing protein	NA	NA	NA	NA	NA
WP_013966697.1|2871065_2871635_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013964261.1|2871627_2873211_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	41.6	2.6e-93
WP_049785394.1|2873260_2873572_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_013964263.1|2873598_2873889_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013966698.1|2873937_2875068_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_156797197.1|2875648_2875921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966700.1|2876545_2877094_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_083817969.1|2876991_2877339_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_013966701.1|2877626_2878862_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	35.5	6.6e-28
WP_083817970.1|2879339_2881268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966703.1|2881721_2882234_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_013966704.1|2882278_2884006_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.0	1.3e-16
WP_013966705.1|2884618_2885131_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_013966706.1|2885176_2886901_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.2	7.3e-17
WP_013966707.1|2887778_2888291_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_013965091.1|2888354_2890091_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	31.1	1.6e-11
WP_156797089.1|2890162_2891330_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	42.2	1.4e-56
WP_013966704.1|2891524_2893252_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.0	1.3e-16
WP_013966709.1|2893296_2893809_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_013966710.1|2894222_2894609_+	glyoxalase	NA	NA	NA	NA	NA
WP_013966711.1|2894613_2895399_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_013966712.1|2895564_2895771_+	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_156797090.1|2896016_2896322_+	DUF3622 domain-containing protein	NA	NA	NA	NA	NA
WP_013966714.1|2896386_2898987_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	42.0	1.2e-188
WP_013966715.1|2899004_2899505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966716.1|2899530_2900571_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_013966718.1|2900762_2901089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966533.1|2901165_2902782_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_013966719.1|2902948_2903407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966720.1|2903453_2907164_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	55.6	2.6e-11
WP_156797091.1|2907430_2907580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966721.1|2907889_2908705_-	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_013966722.1|2908822_2909740_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_013966723.1|2909793_2911149_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_013966724.1|2911174_2911657_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_013966725.1|2911807_2912260_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_013966726.1|2912706_2913618_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_013966727.1|2913902_2914973_+|integrase	site-specific integrase	integrase	G8C7K6	Escherichia_phage	30.0	4.7e-30
WP_013966728.1|2914981_2915911_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966729.1|2916040_2916328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041360357.1|2916324_2916624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156797092.1|2916623_2917529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013966730.1|2917639_2918944_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	38.9	4.5e-35
2921227:2923584	attR	GTAAGCCTCCAATCCATCCACATTAACACCCTGATACGTCATCGCTATCCTCAAACCTTTTACAAGGAGGGACGATGTCATCATCAGAAGCGCGACGAATTCATATCGAAGCATGGCAAACCAGCGGTAAGTCTCAGGCGGCTTATTGCCGGGAACATGGTTTGAATACCAAGACGTTTGGCAATTGGGTTCGCAAGCATCGTGCCGGTCAGGTTATCCGGCCGCCTGCGTTGGTCCCGGTCACGATCAAACCGATGCCTGCACCGACGAGCACGCTACGTCTTCGCGGTCAAGGCAATCATGTGTTGGAGCTGCCATCGACGGTTTCGCCGCATTGGCTGGGGGAGTTGTTGAAGTGTCTTTGATTGCGAATCCAGGGAAGATTTGGTTGATGGTTGAGCCGGTGGATATGCGTCGCGGCATTGACGGATTGTCGGTATTGGTGGAGCAGGCGTTGCAGCGCTCGCCTTGTGCGGGTTCGGCGTTTGTGTTTTGCAATCGCGCGGGCAATCGCATCAAAGTGCTGCTGTGGGACGGCACCGGCGTGTGGTTGTGCCAGCGGCGCTTGCATCAGGGACGGTTCGTTTGGGGGCGTTCGGATACGGGCGGGATGGAACTGACTGCGTTGCAATGGGAGTGGTTGATTGCCGGGGTGGATTGGTGTCGTTTGGGGTTGCAATCCTGCGCAAGAAAATATAGCTGAAAGCCAATACTGGAATCACTTTGCGCAAGTTTTGCAGTATAATAACGCCATGAAAACGCACGCAAAACAGTCAATCGAATTAGATCATTTGAACCTCACGCCGGAAGCTAAAACCGAGGTATCGAACCTTATTCAATCACTGCTTACGCAAGCACAAAACGAGCTCAAACTGCTGGAAGCGAAGAATCAGGCACTGAAGCTGGAACTGGCACATTTGCGCCGCATTCGTTTCGGCGCGAAGAGCGAAGCACTGTCGCAGCCACAATTCAGCCTGTTCGAAGAAGACTGGCAAACTGATGCGGCGGCGATCGAAGCGGAAATCGAGCAACTGCCGCTGCCGGTTCCGCAAAAACCCAAGCGTGCACGCGCTGGGCGCCAACCTCTGCCGGATCACCTGCCACGCATCGAACACCGGCATGAACCGGAATCTTGCCAATGCAAACAGTGCGGCAGCGATCTGGTAAAAATCGGCGAAGACGTCAGCGAACAACTGGACGTCAAACCCGCCGAATTCTTCGTGCACCGTCACATCCGCCCGCAATACGCCTGCCGGGCTTGCGAAACCGTGGTCGCGGAACCGGTTCCGCCCGCGGTGATCGACGGCAGTATGGCAACACCCGGACTGCTTGCTTGGATCACGATCTGCAAATACCTCGATCACCTGCCGCTGTATCGCATCGCACAAATCGCCGCCCGGGAAGGTGTCACTTTATCGCTTTCCACGTTGGCGGAATGGATCGGACGTGTAGGCGTGGCACTACAACCGCTGGTTGACCGGCTGATTTTGCACTTATTGCATGGCTCTGTGTTACACGCCGACGAAACCCCGGTGGCGCAACTTGATCCCGGCAGCGGAAGAACGCAACGCGCCTATCTGTGGGCGTATCGCAGTAACGATTTTGAGTTGGGGCCGCGCATCATCGTATTCGACTACCAAACCAGCCGTAGTGGCAAACATGCGCAAAACTTCCTCAACAGCTGGCAAGGCCACTTGCTGGTAGACGACTATGGCGGTTACAAGGCTTTATTCTCCAAAACAGCATCACCCTGCACTGAATTAGGGTGCTGGGCGCACGCGCGCCGCAAATTCTTCGACCTGCACCAAGCCAATGCCAGCACCGTCGCGTATGAGGTGTTGCAGCGCATAGGCGGACTTTACGCCGTCGAAGCCGAAGGCAAGCACTTATCGACCGAAGCCCGGCAGATACTACGTGCAGAAAAAAGCCTGCCGATCCTGCAATCGTTGCACGACTGGTTACTGCAAACTCGCGCCCAAACTGCCAATGGCGGCGGCACCGCCAAAGCCATCGACTACACCTTGAAGCGCTGGCAAAGCCTAATCCGCTACGCCAGCAGCGGACACCTGCCGATTGACAACAACCCCGTCGAAAACACTATTCGCCCCATCGCGCTCGGCAAGAAAAACTGGCTGTTCACCGGCTCCGAACGCGCCGGAAAACGTGCCGCCGCCATTCAAACCCTACTCGGCACCGCAAAACTCAACGGCCTCAACCCCGCACAATGGCTAGCCGACACCCTCGAAAAACTCCCCACCTGGCCTAATAGCCGAATCGATGAATTGCTACCGCTTGCACCGGAGGATATTGAAGCATTGTTGAAGGAATGTGAGTAGATGGTGGGGTTGGAGGGATACA	NA	NA	NA	NA
>prophage 19
NC_015731	Nitrosomonas sp. Is79A3, complete genome	3783444	3236192	3295247	3783444	transposase,integrase,protease	Acinetobacter_phage(25.0%)	59	3286223:3286269	3294710:3294756
WP_013964816.1|3236192_3237308_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_013967007.1|3237498_3239298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967008.1|3239436_3240342_-	DUF3494 domain-containing protein	NA	NA	NA	NA	NA
WP_013967009.1|3241170_3241605_+	VOC family protein	NA	NA	NA	NA	NA
WP_013967010.1|3241601_3241826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041361115.1|3241834_3242185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041360376.1|3242379_3243057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041360563.1|3243352_3244564_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_013967013.1|3244801_3245125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967014.1|3245138_3245288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967015.1|3245377_3246232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797105.1|3246273_3246438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967016.1|3246681_3247326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967017.1|3247874_3249437_+	thiol oxidoreductase	NA	NA	NA	NA	NA
WP_013967018.1|3249712_3250840_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_013967019.1|3251098_3252364_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	46.2	4.8e-98
WP_013967020.1|3252418_3254185_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	3.3e-49
WP_156797201.1|3254277_3254676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967022.1|3254770_3255574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967023.1|3255573_3257127_+	inactive transglutaminase family protein	NA	NA	NA	NA	NA
WP_013967024.1|3257107_3258109_+	alpha-L-glutamate ligase-like protein	NA	NA	NA	NA	NA
WP_013967025.1|3258147_3259812_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_013967026.1|3260238_3261108_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_013967027.1|3261229_3261679_+	universal stress protein	NA	NA	NA	NA	NA
WP_041360377.1|3261705_3262509_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_013967029.1|3262507_3263539_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	A0A2H4UV25	Bodo_saltans_virus	29.9	5.9e-06
WP_013967030.1|3263605_3264979_-	porin	NA	NA	NA	NA	NA
WP_156797202.1|3265776_3266496_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_013967032.1|3266525_3267191_-|protease	CAAX prenyl protease-related protein	protease	NA	NA	NA	NA
WP_013967033.1|3267362_3268544_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_013967034.1|3268587_3268998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156797106.1|3269054_3270128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156797107.1|3270185_3270347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967036.1|3270398_3270947_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_013967037.1|3271109_3272426_+	twin-arginine translocation signal domain-containing protein	NA	M1HRZ6	Paramecium_bursaria_Chlorella_virus	28.6	1.5e-33
WP_013967038.1|3272432_3272765_-	multidrug transporter	NA	NA	NA	NA	NA
WP_013967039.1|3272795_3273764_-	2-hydroxyacid dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	27.5	9.2e-25
WP_156797108.1|3273975_3274437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013967041.1|3274738_3275956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013967042.1|3275945_3276782_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_013967043.1|3276976_3278362_-	replicative DNA helicase	NA	O80281	Escherichia_phage	55.0	1.9e-132
WP_013967044.1|3278479_3278935_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_013967045.1|3278946_3279228_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_013967046.1|3279247_3279544_-	primosomal replication protein N	NA	NA	NA	NA	NA
WP_041360379.1|3279556_3279970_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_013967048.1|3280290_3280854_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.3	2.2e-71
WP_013967049.1|3280881_3281907_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	8.6e-82
WP_013967050.1|3281914_3282751_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	44.4	1.7e-51
WP_013967051.1|3282899_3283748_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_013967052.1|3283988_3285788_-	hypothetical protein	NA	X2KLG0	Campylobacter_phage	24.9	4.1e-10
3286223:3286269	attL	TATGGTGCCGACACCAAGAATCGAACTCGGGACCTTCTGATTACAAA	NA	NA	NA	NA
WP_013967053.1|3286594_3287050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967054.1|3287511_3288396_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_013967055.1|3289142_3290153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967056.1|3290297_3290639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967057.1|3291133_3291970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013967058.1|3292075_3293458_+	replication initiation factor	NA	NA	NA	NA	NA
WP_013967059.1|3293454_3293784_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013967060.1|3293660_3294698_+|integrase	site-specific integrase	integrase	A0A220NQU7	Salmonella_phage	43.3	4.5e-86
WP_013967061.1|3294818_3295247_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	48.5	1.1e-19
3294710:3294756	attR	TATGGTGCCGACACCAAGAATCGAACTCGGGACCTTCTGATTACAAA	NA	NA	NA	NA
