assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000215975.1_ASM21597v1	NC_015682	Thermodesulfobacterium geofontis OPF15, complete sequence	1	317845-318152	1	CRT	no		cas3,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas4,Cas9_archaeal	Orphan	GAGATGNANNNAAGNTTTGAGGC	23	0	0	NA	NA	NA	5	5	Orphan	cas3,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas4,Cas9_archaeal	NA|69aa|up_4|NC_015682.1_313384_313591_-,NA|67aa|down_3|NC_015682.1_321823_322024_+,NA|27aa|down_7|NC_015682.1_325356_325437_+,NA|67aa|down_9|NC_015682.1_325753_325954_+	NA|471aa|up_9|NC_015682.1_309029_310442_+	pfam01920, Prefoldin_2, Prefoldin subunit	NA|288aa|up_8|NC_015682.1_310535_311399_+	cd02431, Ferritin_CCC1_C, CCC1-related domain of ferritin	NA|231aa|up_7|NC_015682.1_311429_312122_+	TIGR02495, RADICAL-ACTIVATING_ENZYME, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|212aa|up_6|NC_015682.1_312123_312759_+	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|210aa|up_5|NC_015682.1_312755_313385_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|69aa|up_4|NC_015682.1_313384_313591_-	NA	NA|269aa|up_3|NC_015682.1_313757_314564_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|209aa|up_2|NC_015682.1_314583_315210_+	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|161aa|up_1|NC_015682.1_315315_315798_-	COG1180, PflA, Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]	NA|418aa|up_0|NC_015682.1_315921_317175_-	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|464aa|down_0|NC_015682.1_318249_319641_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|100aa|down_1|NC_015682.1_319669_319969_+	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|309aa|down_2|NC_015682.1_320514_321441_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|67aa|down_3|NC_015682.1_321823_322024_+	NA	NA|442aa|down_4|NC_015682.1_322368_323694_+	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only]	NA|309aa|down_5|NC_015682.1_323887_324814_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|51aa|down_6|NC_015682.1_324924_325077_+	pfam10047, DUF2281, Protein of unknown function (DUF2281)	NA|27aa|down_7|NC_015682.1_325356_325437_+	NA	NA|49aa|down_8|NC_015682.1_325445_325592_+	pfam10049, DUF2283, Protein of unknown function (DUF2283)	NA|67aa|down_9|NC_015682.1_325753_325954_+	NA
GCF_000215975.1_ASM21597v1	NC_015682	Thermodesulfobacterium geofontis OPF15, complete sequence	2	1115343-1118449	1,1,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1	cas3,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas4,Cas9_archaeal	Type III-A,Type III-C,Type III-B,Type III-D	GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA,GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA,GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA,GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA,GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	35,35,34,34,35	0	0	NA	NA	NA:NA:NA:NA:NA	36,41,41,36,36	41	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	cas3,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas4,Cas9_archaeal	NA|226aa|up_3|NC_015682.1_1112982_1113660_+,NA	csm2gr11|140aa|up_9|NC_015682.1_1107279_1107699_+	COG1421, COG1421, CRISPR system related protein [Defense mechanisms]	csm3gr7|300aa|up_8|NC_015682.1_1107700_1108600_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|322aa|up_7|NC_015682.1_1108617_1109583_+	TIGR01903, Hypothetical_protein	csm5gr7|397aa|up_6|NC_015682.1_1109594_1110785_+	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5	cas6|284aa|up_5|NC_015682.1_1110786_1111638_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx1|457aa|up_4|NC_015682.1_1111606_1112977_+	TIGR01897, hypothetical_protein, CRISPR-associated protein, MJ1666 family	NA|226aa|up_3|NC_015682.1_1112982_1113660_+	NA	cas2|87aa|up_2|NC_015682.1_1113644_1113905_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|292aa|up_1|NC_015682.1_1113921_1114797_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|82aa|up_0|NC_015682.1_1114811_1115057_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|134aa|down_0|NC_015682.1_1118589_1118991_-	cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family	NA|121aa|down_1|NC_015682.1_1119019_1119382_-	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like	NA|131aa|down_2|NC_015682.1_1119915_1120308_+	COG2149, COG2149, Predicted membrane protein [Function unknown]	NA|240aa|down_3|NC_015682.1_1120562_1121282_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|598aa|down_4|NC_015682.1_1121296_1123090_-	pfam02705, K_trans, K+ potassium transporter	NA|596aa|down_5|NC_015682.1_1123160_1124948_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|184aa|down_6|NC_015682.1_1125055_1125607_+	cd11375, Peptidase_M54, Peptidase family M54, also called archaemetzincins or archaelysins	NA|904aa|down_7|NC_015682.1_1125791_1128503_+	TIGR03508, decahem_SO, decaheme c-type cytochrome, DmsE family	NA|211aa|down_8|NC_015682.1_1128504_1129137_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|130aa|down_9|NC_015682.1_1129173_1129563_+	cd08168, Cytochrom_C3, Heme-binding domain of the class III cytochrome C family and related proteins
GCF_000215975.1_ASM21597v1	NC_015682	Thermodesulfobacterium geofontis OPF15, complete sequence	3	1221572-1225128	4,2,3	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas5,cas3,cas4,cas1,cas2	cas3,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas4,Cas9_archaeal	Unclear	GTTTCAATCCACCAAAGAGGAATTTAAAC,GTTTCAATCCACCAAAGAGGAATTTAAAC,GTTTCAATCCACCAAAGAGGAATTTAAAC	29,29,29	0	0	NA	NA	NA:NA:NA	53,54,54	54	Unclear	cas3,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas4,Cas9_archaeal	NA|357aa|up_6|NC_015682.1_1213802_1214873_+,NA|123aa|up_5|NC_015682.1_1214875_1215244_+,NA|117aa|down_0|NC_015682.1_1225362_1225713_+	NA|332aa|up_9|NC_015682.1_1211488_1212484_-	PRK08652, PRK08652, acetylornithine deacetylase; Provisional	NA|154aa|up_8|NC_015682.1_1212450_1212912_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	cas6|244aa|up_7|NC_015682.1_1213068_1213800_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|357aa|up_6|NC_015682.1_1213802_1214873_+	NA	NA|123aa|up_5|NC_015682.1_1214875_1215244_+	NA	cas5|278aa|up_4|NC_015682.1_1216318_1217152_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|843aa|up_3|NC_015682.1_1217153_1219682_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas4|170aa|up_2|NC_015682.1_1219674_1220184_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|324aa|up_1|NC_015682.1_1220183_1221155_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|94aa|up_0|NC_015682.1_1221156_1221438_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|117aa|down_0|NC_015682.1_1225362_1225713_+	NA	NA|90aa|down_1|NC_015682.1_1226093_1226363_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|164aa|down_2|NC_015682.1_1226344_1226836_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|137aa|down_3|NC_015682.1_1227185_1227596_-	pfam05168, HEPN, HEPN domain	NA|106aa|down_4|NC_015682.1_1227592_1227910_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|382aa|down_5|NC_015682.1_1227961_1229107_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|458aa|down_6|NC_015682.1_1229189_1230563_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|358aa|down_7|NC_015682.1_1230626_1231700_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|375aa|down_8|NC_015682.1_1231725_1232850_+	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|285aa|down_9|NC_015682.1_1232846_1233701_-	cd01171, YXKO-related, B
