assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000215665.1_ASM21566v1	NC_015683	Corynebacterium ulcerans BR-AD22, complete sequence	1	26730-29078	1,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	Type I-E	GGAACTACCTCCGCATACGCGGAGAAAAG,GGAACTACCTCCGCGTACGCGGAGAAAAG,GGAACTACCTCCGCGTACGCGGAGAAAAG,GGAACTACCTCCGCGTACGCGGAGAAAAG	29,29,29,29	4	4	27491-27522|27552-27583|28041-28072|28651-28682	NC_015683.1_1880893-1880862|NC_015683.1_1863884-1863853|NC_015683.1_1869491-1869460|NC_015683.1_1868154-1868123	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	38,38,15,15	38	TypeI-E	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	NA|129aa|up_2|NC_015683.1_22896_23283_-,NA|191aa|up_1|NC_015683.1_23830_24403_-,cas8e|538aa|down_4|NC_015683.1_34056_35670_+	NA|334aa|up_9|NC_015683.1_14753_15755_+	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|345aa|up_8|NC_015683.1_15799_16834_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|258aa|up_7|NC_015683.1_16834_17608_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|235aa|up_6|NC_015683.1_17691_18396_-	PRK13808, PRK13808, adenylate kinase; Provisional	NA|179aa|up_5|NC_015683.1_18472_19009_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|247aa|up_4|NC_015683.1_19092_19833_+	pfam01694, Rhomboid, Rhomboid family	NA|643aa|up_3|NC_015683.1_20893_22822_+	pfam17961, Big_8, Bacterial Ig domain	NA|129aa|up_2|NC_015683.1_22896_23283_-	NA	NA|191aa|up_1|NC_015683.1_23830_24403_-	NA	NA|76aa|up_0|NC_015683.1_25693_25921_-	pfam18495, VbhA, Antitoxin VbhA	cas2|124aa|down_0|NC_015683.1_29096_29468_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|down_1|NC_015683.1_29468_30422_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas3|898aa|down_2|NC_015683.1_30418_33112_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas6e|237aa|down_3|NC_015683.1_33132_33843_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|538aa|down_4|NC_015683.1_34056_35670_+	NA	cse2gr11|198aa|down_5|NC_015683.1_35666_36260_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|356aa|down_6|NC_015683.1_36259_37327_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|231aa|down_7|NC_015683.1_37338_38031_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|345aa|down_8|NC_015683.1_38107_39142_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|down_9|NC_015683.1_39556_40480_+	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins
GCF_000215665.1_ASM21566v1	NC_015683	Corynebacterium ulcerans BR-AD22, complete sequence	2	108234-109011	2,2,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,csb3,cas3,csb2gr5,csb1gr7	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	Unclear	ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC,ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC,GAAACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC,ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC	36,36,39,36	0	0	NA	NA	NA:NA:NA:NA	10,10,6,6	10	Unclear	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	NA|86aa|up_1|NC_015683.1_107371_107629_+,NA|100aa|up_0|NC_015683.1_107625_107925_-,NA|46aa|down_6|NC_015683.1_117881_118019_+	NA|1098aa|up_9|NC_015683.1_96748_100042_+	cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins	NA|379aa|up_8|NC_015683.1_100319_101456_+	cd00599, GH25_muramidase, Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues	NA|362aa|up_7|NC_015683.1_101510_102596_-	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type	NA|252aa|up_6|NC_015683.1_102828_103584_-	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|191aa|up_5|NC_015683.1_103744_104317_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|503aa|up_4|NC_015683.1_104414_105923_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|204aa|up_3|NC_015683.1_105937_106549_-	pfam13470, PIN_3, PIN domain	NA|136aa|up_2|NC_015683.1_106576_106984_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|86aa|up_1|NC_015683.1_107371_107629_+	NA	NA|100aa|up_0|NC_015683.1_107625_107925_-	NA	cas2|100aa|down_0|NC_015683.1_109204_109504_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|534aa|down_1|NC_015683.1_109500_111102_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	csb3|344aa|down_2|NC_015683.1_111106_112138_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|894aa|down_3|NC_015683.1_112142_114824_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|526aa|down_4|NC_015683.1_114816_116394_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb1gr7|402aa|down_5|NC_015683.1_116397_117603_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	NA|46aa|down_6|NC_015683.1_117881_118019_+	NA	NA|269aa|down_7|NC_015683.1_118300_119107_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|196aa|down_8|NC_015683.1_119200_119788_+	cd03370, nitroreductase, uncharacterized nitroreductase family proteins	NA|186aa|down_9|NC_015683.1_119869_120427_+	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E
GCF_000215665.1_ASM21566v1	NC_015683	Corynebacterium ulcerans BR-AD22, complete sequence	3	1537109-1537269	3	CRISPRCasFinder	no		cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	Orphan	GCAGCAGGTTTTGGAGCGGCTGGCTT	26	0	0	NA	NA	NA	3	3	Orphan	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	NA,NA	NA|768aa|up_9|NC_015683.1_1524033_1526337_-	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase	NA|90aa|up_8|NC_015683.1_1526476_1526746_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|322aa|up_7|NC_015683.1_1526944_1527910_-	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB)	NA|333aa|up_6|NC_015683.1_1527927_1528926_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|305aa|up_5|NC_015683.1_1528938_1529853_+	PRK03287, truB, tRNA pseudouridine synthase B; Provisional	NA|224aa|up_4|NC_015683.1_1529877_1530549_-	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|292aa|up_3|NC_015683.1_1530545_1531421_-	COG1409, Icc, Predicted phosphohydrolases [General function prediction only]	NA|451aa|up_2|NC_015683.1_1531491_1532844_-	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|331aa|up_1|NC_015683.1_1532938_1533931_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|146aa|up_0|NC_015683.1_1533923_1534361_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|125aa|down_0|NC_015683.1_1537635_1538010_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|333aa|down_1|NC_015683.1_1538285_1539284_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|185aa|down_2|NC_015683.1_1539280_1539835_-	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|305aa|down_3|NC_015683.1_1539893_1540808_+	pfam14530, DUF4439, Domain of unknown function (DUF4439)	NA|586aa|down_4|NC_015683.1_1540902_1542660_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|246aa|down_5|NC_015683.1_1542692_1543430_+	PRK02101, PRK02101, peroxide stress protein YaaA	NA|256aa|down_6|NC_015683.1_1543496_1544264_-	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|459aa|down_7|NC_015683.1_1544358_1545735_+	PRK00029, PRK00029, YdiU family protein	NA|372aa|down_8|NC_015683.1_1545762_1546878_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|188aa|down_9|NC_015683.1_1546918_1547482_-	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
GCF_000215665.1_ASM21566v1	NC_015683	Corynebacterium ulcerans BR-AD22, complete sequence	4	2018736-2020718	4,3,5	CRISPRCasFinder,CRT,PILER-CR	no	DinG,csa3	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	Type IV-A, Type I-A?	CTTTTCTCCGCGTATGCGGAGGTAGTTCC,CTTTTCTCCGCGTATGCGGAGGTAGTTCC,GGAACTACCTCCGCATACGCGGAGAAAAG	29,29,29	6	6	2018826-2018857|2018948-2018980|2019376-2019407|2019926-2019957|2020109-2020140|2020170-2020201	NC_015683.1_1885184-1885215|NC_015683.1_574302-574270|NC_015683.1_1863766-1863735|NC_015683.1_2144582-2144613|NC_015683.1_1850036-1850067|NC_015683.1_2119384-2119415	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	32,32,29	32	Orphan	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	NA,NA|115aa|down_1|NC_015683.1_2021742_2022087_+	NA|245aa|up_9|NC_015683.1_2008627_2009362_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|256aa|up_8|NC_015683.1_2009400_2010168_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|298aa|up_7|NC_015683.1_2010240_2011134_-	PRK00865, PRK00865, glutamate racemase; Provisional	NA|273aa|up_6|NC_015683.1_2011200_2012019_-	pfam01694, Rhomboid, Rhomboid family	NA|179aa|up_5|NC_015683.1_2012104_2012641_-	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|100aa|up_4|NC_015683.1_2012740_2013040_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|452aa|up_3|NC_015683.1_2013245_2014601_+	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	DinG|655aa|up_2|NC_015683.1_2014667_2016632_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|155aa|up_1|NC_015683.1_2016653_2017118_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|426aa|up_0|NC_015683.1_2017150_2018428_-	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|101aa|down_0|NC_015683.1_2020873_2021176_+	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|115aa|down_1|NC_015683.1_2021742_2022087_+	NA	NA|574aa|down_2|NC_015683.1_2022229_2023951_-	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I	NA|329aa|down_3|NC_015683.1_2024418_2025405_-	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|162aa|down_4|NC_015683.1_2025844_2026330_+	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|720aa|down_5|NC_015683.1_2026396_2028556_-	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|146aa|down_6|NC_015683.1_2028705_2029143_-	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|78aa|down_7|NC_015683.1_2029269_2029503_-	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH	NA|41aa|down_8|NC_015683.1_2029977_2030100_-	PRK00831, rpmJ, 50S ribosomal protein L36; Validated	NA|277aa|down_9|NC_015683.1_2030334_2031165_+	PRK00768, nadE, ammonia-dependent NAD(+) synthetase
