The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	229721	278598	2133496	holin,protease,transposase	Indivirus(20.0%)	45	NA	NA
WP_000411210.1|229721_230591_-|holin	choline kinase LicA	holin	NA	NA	NA	NA
WP_000609887.1|230607_231630_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_000638507.1|231634_232342_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000835913.1|232677_234165_+	type IV teichoic acid flippase TacF	NA	NA	NA	NA	NA
WP_000812001.1|234174_234978_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	9.0e-10
WP_001199647.1|234979_235789_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	29.5	3.5e-09
WP_001126426.1|236063_239240_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_000166701.1|239551_240631_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.9	6.3e-59
WP_001293836.1|240680_241604_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	3.0e-25
WP_000850024.1|241622_242144_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_000244451.1|242354_242984_-	endonuclease III	NA	NA	NA	NA	NA
WP_000773234.1|242983_243526_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_001818871.1|243704_244022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001818872.1|244260_245820_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	27.5	9.3e-11
WP_000895734.1|245863_246763_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_000219824.1|246764_247325_-	LemA family protein	NA	NA	NA	NA	NA
WP_000802934.1|247418_248132_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_001813450.1|248434_249718_+	uracil transporter	NA	Q9KX94	Enterobacteria_phage	35.3	3.1e-60
WP_000863628.1|249912_251484_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000402066.1|251495_251828_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_000702355.1|251918_252296_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_001003509.1|252367_253672_+	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	29.8	2.3e-26
WP_000023522.1|253684_254491_+	sugar-phosphatase	NA	NA	NA	NA	NA
WP_001009000.1|254533_255532_+	SAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068669.1|255812_256160_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000237416.1|256278_256608_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.8	6.3e-10
WP_000712094.1|256601_256976_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_000362441.1|256972_257239_-	chorismate mutase	NA	NA	NA	NA	NA
WP_001162128.1|257354_257798_-	flavodoxin	NA	NA	NA	NA	NA
WP_000401798.1|257901_258837_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_001808393.1|258890_259175_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_001818873.1|259231_259450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000199560.1|260521_261868_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000711939.1|262373_262544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424223.1|264896_265346_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_001000318.1|265850_266306_-	HIT domain-containing protein	NA	NA	NA	NA	NA
WP_000272434.1|266327_267788_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000239901.1|267847_269425_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_001180441.1|269493_270933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001155321.1|271288_272242_+|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_001071049.1|273131_274064_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_000448315.1|274064_274751_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_078101602.1|275467_276226_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001165928.1|276403_277012_+	DUF624 domain-containing protein	NA	NA	NA	NA	NA
WP_088782213.1|277246_278598_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	50.9	5.9e-62
>prophage 2
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	350211	407010	2133496	holin,transposase,tRNA	Bacillus_virus(17.39%)	57	NA	NA
WP_001090163.1|350211_351240_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_000240822.1|351910_352300_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_127820884.1|352353_353061_-	G5 domain-containing protein	NA	NA	NA	NA	NA
WP_000835652.1|353760_354312_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000058033.1|354709_355534_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	57.5	1.8e-74
WP_000283118.1|355530_356991_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	43.3	1.1e-103
WP_000797188.1|357106_357595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001107505.1|357584_357794_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	49.1	4.1e-07
WP_171800964.1|358917_359724_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	4.9e-24
WP_001811050.1|361093_361405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000169109.1|361419_362706_-	U32 family peptidase	NA	Q6DW11	Phage_TP	31.1	1.6e-40
WP_001262531.1|363329_363512_+	ApaLI family restriction endonuclease	NA	NA	NA	NA	NA
WP_078102641.1|363521_363887_+	ApaLI family restriction endonuclease	NA	NA	NA	NA	NA
WP_000217312.1|363883_365074_+	site-specific DNA-methyltransferase	NA	S0A0D5	Cellulophaga_phage	38.4	5.4e-43
WP_000122904.1|365588_366581_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000708392.1|366740_368495_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.2	1.2e-22
WP_000657824.1|368478_370200_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	8.4e-29
WP_000368970.1|370210_370840_+	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_029645262.1|370740_371298_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000229362.1|371285_372650_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	3.2e-15
WP_171800965.1|373958_374360_-|transposase	transposase	transposase	A0A218MNE7	uncultured_virus	25.6	6.7e-06
WP_000484480.1|374367_374673_-|transposase	IS66 family transposase zinc-finger binding domain-containing protein	transposase	NA	NA	NA	NA
WP_000691852.1|374659_374854_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001136122.1|375250_375436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000065723.1|375739_377302_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.4e-19
WP_000936188.1|377443_378142_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000071668.1|378184_379081_-	EamA family transporter	NA	NA	NA	NA	NA
WP_000872215.1|379089_380025_-	serine hydrolase	NA	NA	NA	NA	NA
WP_001102216.1|380021_380747_-	proteinase	NA	NA	NA	NA	NA
WP_000290649.1|380830_381466_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.2	4.3e-07
WP_000972923.1|381467_382295_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001843873.1|382653_383370_-	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	32.0	3.2e-27
WP_001272942.1|383892_384504_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	3.8e-16
WP_000855749.1|384548_385277_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272302.1|385315_386227_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.8	4.5e-90
WP_000926600.1|386292_386517_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590987.1|386594_387338_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	1.6e-29
WP_001103449.1|387337_388138_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|388295_388652_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170346.1|388664_389177_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.6	1.3e-46
WP_000405832.1|389176_389671_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858730.1|389805_390252_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097986.1|390248_390896_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689945.1|390916_391498_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138517.1|391498_392374_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036769.1|392525_393905_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000175413.1|394199_395123_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915946.1|395182_395788_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	7.7e-54
WP_000673678.1|395805_397050_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	3.8e-55
WP_000371287.1|398039_398297_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_000164759.1|398338_400375_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038738.1|400634_401552_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_000369578.1|401921_402683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099681.1|402955_403798_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	1.7e-51
WP_001844203.1|403911_405303_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001813436.1|405537_405915_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
WP_001155321.1|406056_407010_-|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
>prophage 3
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	490603	497357	2133496	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081006.1|490603_491572_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
WP_000011276.1|491605_492517_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	100.0	2.3e-155
WP_001231086.1|492513_493491_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163033.1|493487_494378_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
WP_001140412.1|494429_494810_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|494820_495408_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000106346.1|495416_496649_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
WP_000442275.1|496680_496851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162484.1|496850_497357_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	42.5	6.7e-27
>prophage 4
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	780098	787430	2133496		uncultured_Mediterranean_phage(33.33%)	9	NA	NA
WP_000167830.1|780098_780800_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.5	1.2e-34
WP_000777242.1|781222_782182_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	1.2e-56
WP_001193676.1|782171_783128_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764306.1|783124_783877_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.9	5.6e-14
WP_000858258.1|783972_784938_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000821640.1|785162_785405_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
WP_001222228.1|785404_786127_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000105314.1|786113_786683_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	6.6e-15
WP_000351907.1|786701_787430_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	5.3e-09
>prophage 5
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	948785	957539	2133496		Streptococcus_phage(33.33%)	9	NA	NA
WP_000073428.1|948785_950264_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
WP_000266660.1|950314_951412_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000455900.1|951414_951783_-	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	4.5e-17
WP_000424278.1|951941_953192_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	43.0	7.0e-94
WP_000170222.1|953188_954472_+	insulinase family protein	NA	A0A0G2Y5U8	Acanthamoeba_polyphaga_mimivirus	31.6	3.2e-17
WP_001227958.1|954513_955335_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000712132.1|955345_955891_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000835715.1|955887_956715_+	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.8e-22
WP_000510408.1|956699_957539_+	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.6	1.5e-15
>prophage 6
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	1276025	1322809	2133496	bacteriocin,protease,transposase,tRNA	Indivirus(25.0%)	45	NA	NA
WP_000424474.1|1276025_1276400_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619779.1|1276607_1277510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424457.1|1277565_1277805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072926.1|1277801_1278530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770313.1|1279664_1279904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001035356.1|1280453_1282292_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282984.1|1282692_1283814_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193625.1|1283954_1284410_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|1284419_1286333_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331983.1|1286756_1288436_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639577.1|1288437_1288671_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000184676.1|1289052_1289274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974043.1|1289486_1289639_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
WP_000180803.1|1289640_1289826_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
WP_000865727.1|1290003_1290687_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000569825.1|1290683_1291121_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_000655053.1|1291110_1292121_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	NA	NA	NA	NA
WP_000288032.1|1296592_1298209_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	36.0	1.7e-28
WP_001818694.1|1298228_1298906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000432158.1|1299101_1299428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000777225.1|1299447_1299951_+	asparagine synthase	NA	NA	NA	NA	NA
WP_000399185.1|1299931_1300642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001283046.1|1300653_1301403_+	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_001017607.1|1301415_1302588_+	nucleotide sugar dehydrogenase	NA	M1IJ73	Paramecium_bursaria_Chlorella_virus	42.9	1.6e-79
WP_000570712.1|1302982_1303846_+	MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000933479.1|1304131_1304365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000738306.1|1304386_1305064_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000720787.1|1305075_1305741_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000862427.1|1305812_1307039_+	MFS transporter	NA	NA	NA	NA	NA
WP_001141657.1|1307537_1308194_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_000253914.1|1308183_1308507_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_000724961.1|1308610_1309441_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000724935.1|1309662_1310493_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000694501.1|1310646_1311501_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000231827.1|1311600_1312974_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_000085676.1|1312966_1314028_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.7	6.7e-29
WP_000444642.1|1314029_1314722_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000748394.1|1314751_1315321_-	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_000532354.1|1315455_1316070_+	YesL family protein	NA	NA	NA	NA	NA
WP_171800966.1|1316071_1317718_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000278866.1|1317729_1319016_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000729036.1|1319076_1319610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000692018.1|1319687_1320158_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_000075791.1|1320450_1321713_-	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_001155321.1|1321855_1322809_-|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
>prophage 7
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	1473525	1543782	2133496	holin,protease,transposase	Streptococcus_phage(25.0%)	53	NA	NA
WP_001063397.1|1473525_1475631_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.7	5.8e-117
WP_001818716.1|1476353_1477373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000386786.1|1479390_1480299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220022.1|1480300_1482199_+	YcaO-like family protein	NA	NA	NA	NA	NA
WP_001155321.1|1482723_1483677_-|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_000378912.1|1484046_1484346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000417117.1|1484347_1485118_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA	NA
WP_001818718.1|1485137_1485302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000032550.1|1489121_1489604_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_000743578.1|1489698_1491183_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156799.1|1491335_1492943_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_001022232.1|1493100_1493274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000091069.1|1495840_1497286_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	59.9	3.1e-133
WP_000565348.1|1497287_1498019_+	tyrosine-protein phosphatase CpsB	NA	NA	NA	NA	NA
WP_000664172.1|1498027_1498720_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	56.3	6.1e-63
WP_001142515.1|1498729_1499395_+	polysaccharide biosynthesis tyrosine autokinase CpsD	NA	A0A1X9I5D6	Streptococcus_phage	60.7	1.1e-72
WP_001053205.1|1499535_1500672_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_001079795.1|1500664_1501216_+	acyltransferase	NA	NA	NA	NA	NA
WP_000862350.1|1501212_1502367_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_000672721.1|1502483_1503788_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_001818726.1|1503973_1505143_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_001214397.1|1505210_1506281_+	UDP-glucuronate 4-epimerase Gla	NA	A0A291LAD7	Escherichia_phage	27.6	7.3e-23
WP_000685088.1|1506309_1507542_+	nucleotide sugar dehydrogenase	NA	M1I6D5	Acanthocystis_turfacea_Chlorella_virus	49.9	6.3e-103
WP_000268343.1|1507757_1507940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000676139.1|1509747_1510605_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	61.1	7.4e-95
WP_000131462.1|1510605_1511202_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	33.1	5.1e-10
WP_000141505.1|1511211_1512261_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	45.1	8.3e-72
WP_001869275.1|1513253_1513688_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000842605.1|1514605_1516588_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001032517.1|1516888_1522192_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA	NA
WP_001040002.1|1522358_1524518_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
WP_000611596.1|1524514_1525111_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	8.7e-18
WP_000179549.1|1525176_1525704_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_000146522.1|1525773_1526103_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711408.1|1526588_1527746_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039278.1|1527758_1529153_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158793.1|1529228_1530653_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	2.1e-41
WP_000518008.1|1530664_1531354_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000771100.1|1531451_1532408_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000765667.1|1532525_1533758_-	MFS transporter	NA	NA	NA	NA	NA
WP_001818729.1|1533800_1534388_-	lanthionine synthetase	NA	NA	NA	NA	NA
WP_000196971.1|1535285_1535615_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000163315.1|1535736_1536615_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373452.1|1536596_1537550_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562440.1|1537536_1538544_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210618.1|1538527_1539538_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224637.1|1539615_1540314_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743686.1|1540310_1541306_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698434.1|1541319_1541952_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001854757.1|1541952_1542195_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_078157354.1|1542119_1542428_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_000754502.1|1542868_1543108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078157356.1|1543152_1543782_+|protease	serine protease	protease	NA	NA	NA	NA
>prophage 8
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	1602202	1715606	2133496	bacteriocin,protease,transposase,tRNA	Klosneuvirus(20.0%)	105	NA	NA
WP_001809505.1|1602202_1602373_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000628994.1|1603022_1604246_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_001059636.1|1604413_1605736_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000236903.1|1605737_1607624_+	DUF4838 domain-containing protein	NA	NA	NA	NA	NA
WP_000836780.1|1607791_1608136_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000429427.1|1608145_1609558_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_000359731.1|1609627_1611307_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001809506.1|1611432_1612872_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691685.1|1612875_1614225_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|1614412_1615261_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403169.1|1615275_1615824_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693288.1|1615830_1616133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656538.1|1616234_1617917_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	4.5e-19
WP_001148102.1|1617901_1618732_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181374.1|1618924_1619428_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185833.1|1619880_1620444_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_000678692.1|1620457_1621084_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000525617.1|1621195_1622068_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_153232345.1|1622197_1622335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000781144.1|1622758_1623673_+	ThiF family adenylyltransferase	NA	NA	NA	NA	NA
WP_000170500.1|1623665_1624679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001236730.1|1624662_1626255_+	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	25.1	9.2e-14
WP_000867291.1|1627532_1627874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000418402.1|1628285_1628873_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105242.1|1629262_1630870_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	8.9e-142
WP_000026639.1|1631428_1633060_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795174.1|1633352_1638332_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|1638421_1639618_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000659547.1|1640358_1640715_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_001122900.1|1640751_1642098_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|1642193_1642313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410533.1|1642277_1642427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067590.1|1642570_1642708_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220744.1|1642878_1644156_+	restriction endonuclease subunit S	NA	A0A1V0SKS6	Klosneuvirus	29.8	5.3e-12
WP_000229456.1|1644103_1645387_-	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	25.6	8.2e-13
WP_001088689.1|1647913_1648423_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255782.1|1648586_1649621_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|1649647_1650172_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|1650651_1652475_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000115729.1|1652487_1652841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066295.1|1653045_1654182_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.3	2.4e-24
WP_001813906.1|1654531_1654771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777753.1|1654932_1655220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278304.1|1655229_1655640_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	4.4e-05
WP_000889923.1|1655707_1656439_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653751.1|1656435_1657485_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132572.1|1657652_1657982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682133.1|1658258_1658597_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219141.1|1658601_1659339_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001099892.1|1659352_1660693_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000358811.1|1660736_1660892_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069071.1|1660948_1662310_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_000205166.1|1663902_1664490_-	peptidase C39	NA	NA	NA	NA	NA
WP_001093259.1|1664771_1664969_+|bacteriocin	bacteriocin-like peptide BlpI	bacteriocin	NA	NA	NA	NA
WP_001093248.1|1665435_1665705_+|bacteriocin	bacteriocin-like peptide BlpJ	bacteriocin	NA	NA	NA	NA
WP_000379964.1|1665773_1666004_+|bacteriocin	bacteriocin-like peptide BlpU	bacteriocin	NA	NA	NA	NA
WP_001844187.1|1666006_1666126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000727118.1|1666424_1666589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000846569.1|1666585_1666981_+	hypothetical protein	NA	NA	NA	NA	NA
WP_128887636.1|1668065_1668869_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_000379879.1|1669019_1669274_+|bacteriocin	two-peptide bacteriocin subunit BlpM	bacteriocin	NA	NA	NA	NA
WP_001099492.1|1669289_1669493_+|bacteriocin	two-peptide bacteriocin subunit BlpN	bacteriocin	NA	NA	NA	NA
WP_001818346.1|1669736_1669886_+|bacteriocin	bacteriocin-like peptide BlpO	bacteriocin	NA	NA	NA	NA
WP_000346296.1|1669989_1670109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000877383.1|1670894_1671293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000760515.1|1671330_1672020_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000276500.1|1672061_1672310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000394044.1|1672339_1672951_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000363002.1|1673111_1673906_+	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_001266083.1|1673902_1674538_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_001808691.1|1674663_1675143_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_000032273.1|1675186_1676323_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000857562.1|1676344_1676638_+	YlxR family protein	NA	NA	NA	NA	NA
WP_001041390.1|1676630_1676930_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA	NA
WP_000039210.1|1676946_1679739_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	22.9	3.3e-19
WP_001273601.1|1679989_1680340_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_001155321.1|1681892_1682846_+|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_001068160.1|1684121_1684304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000668209.1|1684300_1684441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_128887688.1|1684490_1684616_-|tRNA	lysyl-tRNA synthetase	tRNA	NA	NA	NA	NA
WP_000368741.1|1684709_1684943_+	DUF1858 domain-containing protein	NA	NA	NA	NA	NA
WP_000129106.1|1684942_1686277_+	DUF438 domain-containing protein	NA	NA	NA	NA	NA
WP_000119708.1|1686285_1686540_+	DUF1912 family protein	NA	NA	NA	NA	NA
WP_000038619.1|1686635_1687031_+	helicase	NA	NA	NA	NA	NA
WP_033621729.1|1687313_1687892_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_000124556.1|1687878_1688349_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000550030.1|1688348_1688927_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000032238.1|1688919_1691571_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	41.1	1.7e-150
WP_000033780.1|1691640_1692396_+	DUF3883 domain-containing protein	NA	NA	NA	NA	NA
WP_001192126.1|1692674_1693478_+	Fic family protein	NA	NA	NA	NA	NA
WP_001818356.1|1694911_1695094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000584535.1|1695393_1696233_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_000120571.1|1696250_1698089_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000151831.1|1698101_1699517_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	23.7	3.3e-23
WP_001818763.1|1700108_1701155_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	32.8	1.6e-27
WP_000619941.1|1701154_1701664_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000961596.1|1701740_1704146_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000597994.1|1704318_1705320_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_001818764.1|1706047_1706314_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000108203.1|1706574_1708824_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_000089976.1|1708887_1709754_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_001118972.1|1710438_1712652_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000539972.1|1712667_1713285_+	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_000616911.1|1713296_1714181_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000591087.1|1714262_1715606_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	35.8	1.2e-46
>prophage 9
NC_021004	Streptococcus pneumoniae SPN033038, complete genome	2133496	2051526	2061168	2133496	holin	Streptococcus_phage(88.89%)	10	NA	NA
WP_000728271.1|2051526_2053407_+|holin	phosphorylcholine esterase CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	22.9	1.2e-09
WP_001844069.1|2053489_2054620_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	4.2e-114
WP_000254690.1|2054629_2055892_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	65.0	1.0e-140
WP_000689717.1|2055895_2056693_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	3.2e-60
WP_000033388.1|2056912_2057551_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	2.9e-75
WP_000806714.1|2057547_2058438_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.7	4.9e-73
WP_000358228.1|2058477_2058795_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166883.1|2058797_2059667_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	4.5e-116
WP_001261452.1|2059893_2060412_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000345254.1|2060520_2061168_+	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	33.7	7.0e-13
