assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	1	637135-637217	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AATTCTACAGGCAATGCGAGTTGG	24	1	3	637159-637193|637159-637193|637159-637193	NC_017337.1_834322-834288|NC_017337.1_2390469-2390503|NC_017337.1_1043864-1043830	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|122aa|down_3|NC_017337.1_642088_642454_+,NA|93aa|down_4|NC_017337.1_642456_642735_+	NA|1100aa|up_9|NC_017337.1_625080_628380_+	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|491aa|up_8|NC_017337.1_628498_629971_+	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|497aa|up_7|NC_017337.1_630093_631584_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|293aa|up_6|NC_017337.1_631865_632744_-	PRK13674, PRK13674, GTP cyclohydrolase I FolE2	NA|222aa|up_5|NC_017337.1_632756_633422_-	TIGR04000, thiol_BshB2, bacillithiol biosynthesis deacetylase BshB2	NA|121aa|up_4|NC_017337.1_633435_633798_-	pfam08830, DUF1806, Protein of unknown function (DUF1806)	NA|253aa|up_3|NC_017337.1_634073_634832_+	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|211aa|up_2|NC_017337.1_634908_635541_+	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase	NA|183aa|up_1|NC_017337.1_635542_636091_+	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase	NA|216aa|up_0|NC_017337.1_636203_636851_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|467aa|down_0|NC_017337.1_637652_639053_+	cd17366, MFS_ProP, Proline/betaine transporter of the Major Facilitator Superfamily of transporters	NA|459aa|down_1|NC_017337.1_639596_640973_+	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA	NA|380aa|down_2|NC_017337.1_640974_642114_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|122aa|down_3|NC_017337.1_642088_642454_+	NA	NA|93aa|down_4|NC_017337.1_642456_642735_+	NA	NA|56aa|down_5|NC_017337.1_642925_643093_-	pfam17412, VraX, Family of unknown function	NA|277aa|down_6|NC_017337.1_643627_644458_-	COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]	NA|219aa|down_7|NC_017337.1_644641_645298_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|127aa|down_8|NC_017337.1_645298_645679_+	pfam17261, DUF5327, Family of unknown function (DUF5327)	NA|123aa|down_9|NC_017337.1_645811_646180_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	2	735365-735464	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAGATCCCCTAATTAATAAATTAAAAGGGG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|39aa|up_2|NC_017337.1_733390_733507_+,NA|230aa|down_2|NC_017337.1_737285_737975_-,NA|124aa|down_4|NC_017337.1_738612_738984_+,NA|100aa|down_5|NC_017337.1_739121_739421_+	NA|336aa|up_9|NC_017337.1_725172_726180_+	pfam01384, PHO4, Phosphate transporter family	NA|266aa|up_8|NC_017337.1_726765_727563_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|215aa|up_7|NC_017337.1_727923_728568_+	COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only]	NA|717aa|up_6|NC_017337.1_729264_731415_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|120aa|up_5|NC_017337.1_731560_731920_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|239aa|up_4|NC_017337.1_732109_732826_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|158aa|up_3|NC_017337.1_732825_733299_+	COG3542, COG3542, Uncharacterized conserved protein [Function unknown]	NA|39aa|up_2|NC_017337.1_733390_733507_+	NA	NA|215aa|up_1|NC_017337.1_733651_734296_+	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]	NA|289aa|up_0|NC_017337.1_734411_735278_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|407aa|down_0|NC_017337.1_735481_736702_+	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters	NA|163aa|down_1|NC_017337.1_736698_737187_+	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown]	NA|230aa|down_2|NC_017337.1_737285_737975_-	NA	NA|148aa|down_3|NC_017337.1_738101_738545_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|124aa|down_4|NC_017337.1_738612_738984_+	NA	NA|100aa|down_5|NC_017337.1_739121_739421_+	NA	NA|181aa|down_6|NC_017337.1_739500_740043_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|189aa|down_7|NC_017337.1_740137_740704_-	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|153aa|down_8|NC_017337.1_740705_741164_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|228aa|down_9|NC_017337.1_741166_741850_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	3	882599-882732	1	PILER-CR	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGCGGGGCCCCAACATAGAG	20	2	11	882619-882657|882678-882713|882678-882713|882678-882713|882678-882713|882678-882713|882678-882713|882678-882713|882678-882713|882678-882713|882678-882713	NC_017337.1_555077-555115|NC_017337.1_43306-43271|NC_017337.1_142906-142871|NC_017337.1_554963-554998|NC_017337.1_637236-637271|NC_017337.1_1668622-1668657|NC_017337.1_2131977-2132012|NC_017337.1_2390546-2390581|NC_017337.1_2390602-2390637|NC_017337.1_2390658-2390693|NC_017337.1_2524732-2524697	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|105aa|down_7|NC_017337.1_890480_890795_-	NA|180aa|up_9|NC_017337.1_875200_875740_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_8|NC_017337.1_875890_876211_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_7|NC_017337.1_876354_876711_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_6|NC_017337.1_876868_877249_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_5|NC_017337.1_877427_878306_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|up_4|NC_017337.1_878837_879224_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|up_3|NC_017337.1_879216_879513_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|up_2|NC_017337.1_879762_880788_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|up_1|NC_017337.1_880780_881476_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|up_0|NC_017337.1_881493_882315_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_0|NC_017337.1_883019_883214_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_1|NC_017337.1_883447_884299_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_2|NC_017337.1_884627_885389_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_3|NC_017337.1_885486_886794_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_4|NC_017337.1_886899_888150_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|155aa|down_5|NC_017337.1_888139_888604_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|466aa|down_6|NC_017337.1_888754_890152_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|105aa|down_7|NC_017337.1_890480_890795_-	NA	NA|347aa|down_8|NC_017337.1_891159_892200_+	COG4536, CorB, Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]	NA|356aa|down_9|NC_017337.1_892213_893281_+	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	4	927681-927762	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAATTTCTACAGGCAATGCAAGTTGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|499aa|up_9|NC_017337.1_916566_918063_-	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|114aa|up_8|NC_017337.1_918055_918397_-	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|143aa|up_7|NC_017337.1_918396_918825_-	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B	NA|802aa|up_6|NC_017337.1_918817_921223_-	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed	NA|128aa|up_5|NC_017337.1_921353_921737_-	pfam08810, KapB, Kinase associated protein B	NA|198aa|up_4|NC_017337.1_921800_922394_+	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain	NA|126aa|up_3|NC_017337.1_922809_923187_+	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_2|NC_017337.1_923547_924675_+	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4	NA|397aa|up_1|NC_017337.1_924982_926173_+	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|415aa|up_0|NC_017337.1_926281_927526_+	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|310aa|down_0|NC_017337.1_927919_928849_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|460aa|down_1|NC_017337.1_929090_930470_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|402aa|down_2|NC_017337.1_930459_931665_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|444aa|down_3|NC_017337.1_932014_933346_+	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|192aa|down_4|NC_017337.1_934217_934793_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|down_5|NC_017337.1_934797_935322_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|down_6|NC_017337.1_935337_935913_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|down_7|NC_017337.1_936072_939549_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|down_8|NC_017337.1_939549_943203_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|down_9|NC_017337.1_943368_944271_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	5	1025379-1025536	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTGTTAGGGTTATCTGGATTATTAGG	26	0	0	NA	NA	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|44aa|up_9|NC_017337.1_1016581_1016713_-,NA|37aa|down_3|NC_017337.1_1029895_1030006_+	NA|44aa|up_9|NC_017337.1_1016581_1016713_-	NA	NA|72aa|up_8|NC_017337.1_1016776_1016992_-	COG2314, XynA, Predicted membrane protein [Function unknown]	NA|184aa|up_7|NC_017337.1_1017156_1017708_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|313aa|up_6|NC_017337.1_1017758_1018697_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|454aa|up_5|NC_017337.1_1018878_1020240_+	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|558aa|up_4|NC_017337.1_1020226_1021900_+	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|268aa|up_3|NC_017337.1_1021886_1022690_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|274aa|up_2|NC_017337.1_1022682_1023504_+	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|110aa|up_1|NC_017337.1_1023741_1024071_-	pfam09023, Staphostatin_B, Staphostatin B	NA|394aa|up_0|NC_017337.1_1024108_1025290_-	pfam05543, Peptidase_C47, Staphopain peptidase C47	NA|385aa|down_0|NC_017337.1_1026936_1028091_-	PRK07683, PRK07683, aminotransferase A; Validated	NA|337aa|down_1|NC_017337.1_1028286_1029297_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|140aa|down_2|NC_017337.1_1029449_1029869_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|37aa|down_3|NC_017337.1_1029895_1030006_+	NA	NA|1260aa|down_4|NC_017337.1_1030077_1033857_-	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|145aa|down_5|NC_017337.1_1034084_1034519_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|157aa|down_6|NC_017337.1_1034673_1035144_-	pfam10804, DUF2538, Protein of unknown function (DUF2538)	NA|409aa|down_7|NC_017337.1_1035191_1036418_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|398aa|down_8|NC_017337.1_1036866_1038060_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|93aa|down_9|NC_017337.1_1038596_1038875_-	COG3125, CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	6	1060014-1060110	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG	34	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|45aa|down_0|NC_017337.1_1060119_1060254_-,NA|432aa|down_1|NC_017337.1_1060405_1061701_+	NA|224aa|up_9|NC_017337.1_1047811_1048483_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|NC_017337.1_1048475_1050665_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|NC_017337.1_1050643_1052128_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|NC_017337.1_1052120_1053149_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|NC_017337.1_1053151_1053718_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|NC_017337.1_1053732_1055211_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|NC_017337.1_1055232_1056480_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|NC_017337.1_1056745_1057552_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_1|NC_017337.1_1057544_1058945_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|NC_017337.1_1058960_1059536_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|45aa|down_0|NC_017337.1_1060119_1060254_-	NA	NA|432aa|down_1|NC_017337.1_1060405_1061701_+	NA	NA|391aa|down_2|NC_017337.1_1062124_1063297_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|NC_017337.1_1063350_1063893_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|NC_017337.1_1064046_1064313_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|NC_017337.1_1064315_1066034_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|NC_017337.1_1066268_1066502_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|NC_017337.1_1066699_1068061_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|NC_017337.1_1068057_1069077_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|NC_017337.1_1069209_1069872_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	7	1940251-1940333	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAACATAGTGAAATTGGATCCTCA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|33aa|up_8|NC_017337.1_1931414_1931513_-,NA|132aa|up_0|NC_017337.1_1939504_1939900_-,NA|51aa|down_0|NC_017337.1_1940642_1940795_-	NA|399aa|up_9|NC_017337.1_1929921_1931118_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|33aa|up_8|NC_017337.1_1931414_1931513_-	NA	NA|115aa|up_7|NC_017337.1_1932195_1932540_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|375aa|up_6|NC_017337.1_1932608_1933733_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_5|NC_017337.1_1933911_1934376_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|208aa|up_4|NC_017337.1_1934731_1935355_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|371aa|up_3|NC_017337.1_1935376_1936489_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|274aa|up_2|NC_017337.1_1936651_1937473_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_1|NC_017337.1_1937923_1939309_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|132aa|up_0|NC_017337.1_1939504_1939900_-	NA	NA|51aa|down_0|NC_017337.1_1940642_1940795_-	NA	NA|200aa|down_1|NC_017337.1_1940819_1941419_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|down_2|NC_017337.1_1941577_1942048_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|down_3|NC_017337.1_1942052_1943180_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|241aa|down_4|NC_017337.1_1943330_1944053_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|down_5|NC_017337.1_1944045_1945503_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|down_6|NC_017337.1_1945760_1946822_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_7|NC_017337.1_1955692_1956139_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_8|NC_017337.1_1956235_1957186_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_9|NC_017337.1_1957191_1957647_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	8	2235853-2235942	7	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	TTACAACTTTAGTTGTTAGGGGCTCTTATGCA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|NC_017337.1_2230728_2230959_-,NA|364aa|up_0|NC_017337.1_2234747_2235839_+,NA|35aa|down_0|NC_017337.1_2236347_2236452_-	NA|237aa|up_9|NC_017337.1_2226336_2227047_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NC_017337.1_2227167_2227611_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NC_017337.1_2227810_2228224_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NC_017337.1_2228681_2230055_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NC_017337.1_2230728_2230959_-	NA	NA|313aa|up_4|NC_017337.1_2230989_2231928_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NC_017337.1_2232362_2233028_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NC_017337.1_2233179_2233500_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NC_017337.1_2233501_2234482_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NC_017337.1_2234747_2235839_+	NA	NA|35aa|down_0|NC_017337.1_2236347_2236452_-	NA	NA|286aa|down_1|NC_017337.1_2239299_2240157_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_2|NC_017337.1_2240224_2241007_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|668aa|down_3|NC_017337.1_2243402_2245406_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|602aa|down_4|NC_017337.1_2245557_2247363_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NC_017337.1_2248043_2249582_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NC_017337.1_2249616_2251749_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NC_017337.1_2251760_2252195_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NC_017337.1_2252194_2253301_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2039aa|down_9|NC_017337.1_2253618_2259735_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	9	2355802-2356020	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GTTGGGGCCCCGTTCCCCAACTTGCACATTATTGTAAGCTG	41	2	8	2355843-2355860|2355902-2355919|2355902-2355919|2355902-2355919|2355902-2355919|2355902-2355919|2355902-2355919|2355902-2355919	NC_017337.1_891270-891253|NC_017337.1_801857-801840|NC_017337.1_1185521-1185504|NC_017337.1_2495382-2495365|NC_017337.1_1831580-1831563|NC_017337.1_473934-473917|NC_017337.1_678881-678898|NC_017337.1_1776614-1776597	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_9|NC_017337.1_2346337_2346502_+,NA|106aa|up_8|NC_017337.1_2346736_2347054_+,NA|84aa|up_5|NC_017337.1_2352178_2352430_+,NA|57aa|up_0|NC_017337.1_2355570_2355741_+,NA	NA|55aa|up_9|NC_017337.1_2346337_2346502_+	NA	NA|106aa|up_8|NC_017337.1_2346736_2347054_+	NA	NA|1056aa|up_7|NC_017337.1_2347240_2350408_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NC_017337.1_2350524_2351790_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NC_017337.1_2352178_2352430_+	NA	NA|255aa|up_4|NC_017337.1_2352421_2353186_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NC_017337.1_2353348_2353789_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NC_017337.1_2353781_2354993_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NC_017337.1_2355094_2355445_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NC_017337.1_2355570_2355741_+	NA	NA|341aa|down_0|NC_017337.1_2356202_2357225_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NC_017337.1_2357244_2357844_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NC_017337.1_2357850_2358084_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NC_017337.1_2358089_2358536_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NC_017337.1_2358549_2359035_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NC_017337.1_2359031_2360291_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NC_017337.1_2360353_2360848_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NC_017337.1_2360849_2361356_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NC_017337.1_2361386_2362391_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NC_017337.1_2362559_2363165_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	10	2419470-2419556	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	ATTAGAGCCTCTTATGCAGTTGCTCAG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|177aa|up_9|NC_017337.1_2406503_2407034_+,NA|62aa|down_7|NC_017337.1_2426034_2426220_-	NA|177aa|up_9|NC_017337.1_2406503_2407034_+	NA	NA|255aa|up_8|NC_017337.1_2409033_2409798_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|169aa|up_7|NC_017337.1_2409855_2410362_-	COG3832, COG3832, Uncharacterized conserved protein [Function unknown]	NA|432aa|up_6|NC_017337.1_2410547_2411843_-	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|191aa|up_5|NC_017337.1_2412067_2412640_-	pfam09843, DUF2070, Predicted membrane protein (DUF2070)	NA|294aa|up_4|NC_017337.1_2413126_2414008_-	PRK07985, PRK07985, SDR family oxidoreductase	NA|374aa|up_3|NC_017337.1_2414118_2415240_-	cd05669, M20_Acy1_YxeP-like, M20 Peptidase aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2	NA|413aa|up_2|NC_017337.1_2415517_2416756_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|554aa|up_1|NC_017337.1_2416755_2418417_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|295aa|up_0|NC_017337.1_2418576_2419461_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|140aa|down_0|NC_017337.1_2419642_2420062_+	PRK04101, PRK04101, metallothiol transferase FosB	NA|312aa|down_1|NC_017337.1_2420317_2421253_-	PRK13774, PRK13774, formimidoylglutamase; Provisional	NA|419aa|down_2|NC_017337.1_2421542_2422799_+	COG1266, COG1266, Predicted metal-dependent membrane protease [General function prediction only]	NA|229aa|down_3|NC_017337.1_2422864_2423551_-	PRK13978, PRK13978, ribose 5-phosphate isomerase A	NA|218aa|down_4|NC_017337.1_2423721_2424375_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|340aa|down_5|NC_017337.1_2424610_2425630_-	cd09019, galactose_mutarotase_like, galactose mutarotase_like	NA|109aa|down_6|NC_017337.1_2425659_2425986_-	COG1742, COG1742, Uncharacterized conserved protein [Function unknown]	NA|62aa|down_7|NC_017337.1_2426034_2426220_-	NA	NA|411aa|down_8|NC_017337.1_2426203_2427436_-	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]	NA|300aa|down_9|NC_017337.1_2427428_2428328_-	COG4152, COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only]
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	11	2569913-2570008	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAACTGTATTCCTCTATACCTGTAATTTT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|250aa|up_9|NC_017337.1_2559599_2560349_+,NA|121aa|down_0|NC_017337.1_2570771_2571134_-,NA|64aa|down_7|NC_017337.1_2577185_2577377_-,NA|98aa|down_8|NC_017337.1_2577730_2578024_-,NA|109aa|down_9|NC_017337.1_2578026_2578353_-	NA|250aa|up_9|NC_017337.1_2559599_2560349_+	NA	NA|398aa|up_8|NC_017337.1_2560572_2561766_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|250aa|up_7|NC_017337.1_2561777_2562527_-	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|up_6|NC_017337.1_2562519_2563335_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|290aa|up_5|NC_017337.1_2563331_2564201_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|312aa|up_4|NC_017337.1_2564197_2565133_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|533aa|up_3|NC_017337.1_2565145_2566744_-	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|434aa|up_2|NC_017337.1_2566886_2568188_-	COG4408, COG4408, Uncharacterized protein conserved in bacteria [Function unknown]	NA|273aa|up_1|NC_017337.1_2568180_2568999_-	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|274aa|up_0|NC_017337.1_2569009_2569831_-	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]	NA|121aa|down_0|NC_017337.1_2570771_2571134_-	NA	NA|273aa|down_1|NC_017337.1_2571397_2572216_-	PRK08589, PRK08589, SDR family oxidoreductase	NA|513aa|down_2|NC_017337.1_2572451_2573990_+	pfam03806, ABG_transport, AbgT putative transporter family	NA|141aa|down_3|NC_017337.1_2574101_2574524_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|140aa|down_4|NC_017337.1_2574979_2575399_-	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|232aa|down_5|NC_017337.1_2575649_2576345_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|94aa|down_6|NC_017337.1_2576644_2576926_+	pfam07205, DUF1413, Domain of unknown function (DUF1413)	NA|64aa|down_7|NC_017337.1_2577185_2577377_-	NA	NA|98aa|down_8|NC_017337.1_2577730_2578024_-	NA	NA|109aa|down_9|NC_017337.1_2578026_2578353_-	NA
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	12	2796823-2796901	10	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTCTATGTTGGGGCCCCGCCAA	24	1	19	2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877|2796847-2796877	NC_017337.1_637154-637124|NC_017337.1_834385-834415|NC_017337.1_834443-834473|NC_017337.1_834501-834531|NC_017337.1_834559-834589|NC_017337.1_1043869-1043899|NC_017337.1_1394776-1394746|NC_017337.1_1470164-1470194|NC_017337.1_1470222-1470252|NC_017337.1_1470279-1470309|NC_017337.1_2371328-2371298|NC_017337.1_2390464-2390434|NC_017337.1_2826261-2826291|NC_017337.1_1668597-1668567|NC_017337.1_2826319-2826349|NC_017337.1_555109-555079|NC_017337.1_947828-947858|NC_017337.1_1688169-1688199|NC_017337.1_1776635-1776605	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|88aa|down_1|NC_017337.1_2799761_2800025_-	NA|159aa|up_9|NC_017337.1_2788271_2788748_-	PRK05528, PRK05528, peptide-methionine (S)-S-oxide reductase	NA|167aa|up_8|NC_017337.1_2788750_2789251_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|256aa|up_7|NC_017337.1_2789485_2790253_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|231aa|up_6|NC_017337.1_2790249_2790942_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|221aa|up_5|NC_017337.1_2790958_2791621_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|187aa|up_4|NC_017337.1_2792468_2793029_-	pfam18665, TetR_C_37, Tetracyclin repressor-like, C-terminal domain	NA|413aa|up_3|NC_017337.1_2793192_2794431_+	TIGR03937, Poly-beta-16-N-acetyl-D-glucosamine_synthase, poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA|102aa|up_2|NC_017337.1_2794394_2794700_+	TIGR03932, IcaD_partial, intracellular adhesion protein D	NA|291aa|up_1|NC_017337.1_2794696_2795569_+	TIGR03933, Poly-beta-16-N-acetyl-D-glucosamine_N-deacetylase, intercellular adhesin biosynthesis polysaccharide N-deacetylase	NA|351aa|up_0|NC_017337.1_2795555_2796608_+	COG3936, COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation [Carbohydrate transport and metabolism]	NA|681aa|down_0|NC_017337.1_2796998_2799041_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|88aa|down_1|NC_017337.1_2799761_2800025_-	NA	NA|211aa|down_2|NC_017337.1_2800561_2801194_-	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA|253aa|down_3|NC_017337.1_2801190_2801949_-	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|235aa|down_4|NC_017337.1_2801945_2802650_-	PRK13587, PRK13587, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional	NA|193aa|down_5|NC_017337.1_2802642_2803221_-	PRK13142, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|193aa|down_6|NC_017337.1_2803217_2803796_-	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase	NA|338aa|down_7|NC_017337.1_2803764_2804778_-	COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]	NA|417aa|down_8|NC_017337.1_2804793_2806044_-	PRK13770, PRK13770, histidinol dehydrogenase; Provisional	NA|205aa|down_9|NC_017337.1_2806036_2806651_-	PRK13584, hisG, ATP phosphoribosyltransferase
GCF_000210315.1_ASM21031v1	NC_017337	Staphylococcus aureus subsp. aureus ED133, complete sequence	13	2826142-2826227	11	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	10	2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197|2826172-2826197	NC_017337.1_637243-637218|NC_017337.1_1668629-1668604|NC_017337.1_2390609-2390584|NC_017337.1_2390665-2390640|NC_017337.1_2191331-2191306|NC_017337.1_1688250-1688275|NC_017337.1_1688273-1688298|NC_017337.1_2390553-2390528|NC_017337.1_2495433-2495408|NC_017337.1_2524725-2524750	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|64aa|up_4|NC_017337.1_2823361_2823553_+,NA	NA|339aa|up_9|NC_017337.1_2817472_2818489_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|271aa|up_8|NC_017337.1_2818731_2819544_+	COG2162, NhoA, Arylamine N-acetyltransferase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_7|NC_017337.1_2819839_2820352_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|253aa|up_6|NC_017337.1_2820641_2821400_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_5|NC_017337.1_2821389_2823270_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_4|NC_017337.1_2823361_2823553_+	NA	NA|67aa|up_3|NC_017337.1_2823945_2824146_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|190aa|up_2|NC_017337.1_2824272_2824842_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|132aa|up_1|NC_017337.1_2825101_2825497_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|NC_017337.1_2825564_2825918_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|NC_017337.1_2826585_2827425_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|NC_017337.1_2827467_2828187_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|626aa|down_2|NC_017337.1_2828186_2830064_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|NC_017337.1_2830130_2831510_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|118aa|down_4|NC_017337.1_2831652_2832006_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|NC_017337.1_2832126_2832264_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
