assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000204625.1_ASM20462v1	NC_015433	Streptococcus suis ST3, complete sequence	1	1094675-1094758	1	CRISPRCasFinder	no		cas3,DinG,csn2,cas2,cas1,cas9,csa3,DEDDh	Orphan	GGAGGTTGGAAATTGAGCGAACGAAGTT	28	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csn2,cas2,cas1,cas9,csa3,DEDDh	NA|252aa|up_5|NC_015433.1_1086983_1087739_+,NA|181aa|up_3|NC_015433.1_1089364_1089907_-,NA|157aa|up_2|NC_015433.1_1089926_1090397_-,NA	NA|311aa|up_9|NC_015433.1_1083825_1084758_-	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional	NA|172aa|up_8|NC_015433.1_1084767_1085283_-	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed	NA|141aa|up_7|NC_015433.1_1085309_1085732_-	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed	NA|256aa|up_6|NC_015433.1_1085937_1086705_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|252aa|up_5|NC_015433.1_1086983_1087739_+	NA	NA|344aa|up_4|NC_015433.1_1088107_1089139_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|181aa|up_3|NC_015433.1_1089364_1089907_-	NA	NA|157aa|up_2|NC_015433.1_1089926_1090397_-	NA	NA|419aa|up_1|NC_015433.1_1091600_1092857_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|387aa|up_0|NC_015433.1_1093413_1094574_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|131aa|down_0|NC_015433.1_1094808_1095201_-	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|581aa|down_1|NC_015433.1_1095184_1096927_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|579aa|down_2|NC_015433.1_1096913_1098650_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|325aa|down_3|NC_015433.1_1098651_1099626_-	PRK09653, eutD, phosphotransacetylase	NA|298aa|down_4|NC_015433.1_1099643_1100537_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|276aa|down_5|NC_015433.1_1100536_1101364_-	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|224aa|down_6|NC_015433.1_1101338_1102010_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|189aa|down_7|NC_015433.1_1102096_1102663_+	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|326aa|down_8|NC_015433.1_1102807_1103785_+	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|372aa|down_9|NC_015433.1_1103795_1104911_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
GCF_000204625.1_ASM20462v1	NC_015433	Streptococcus suis ST3, complete sequence	2	1318035-1321367	2,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DinG,csn2,cas2,cas1,cas9,csa3,DEDDh	Type II-A,Type II-B,Type II-C	GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC,GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAACNA,GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC,GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC	36,38,36,36	16	16	1318664-1318692|1318729-1318757|1318794-1318822|1318859-1318887|1318924-1318952|1318989-1319017|1319119-1319147|1319184-1319212|1318666-1318692|1318731-1318757|1318796-1318822|1318861-1318887|1318926-1318952|1318991-1319017|1319121-1319147|1319186-1319212	NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026823-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851|NC_015433.1_1026825-1026851	NA:NA:NA:NA	49,42,27,27	49	TypeII-A,TypeII-B,TypeII-C	cas3,DinG,csn2,cas2,cas1,cas9,csa3,DEDDh	NA,NA|359aa|down_5|NC_015433.1_1329408_1330485_+,NA|103aa|down_6|NC_015433.1_1330606_1330915_-	NA|206aa|up_9|NC_015433.1_1307842_1308460_-	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|247aa|up_8|NC_015433.1_1308446_1309187_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|376aa|up_7|NC_015433.1_1309417_1310545_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|193aa|up_6|NC_015433.1_1310639_1311218_+	pfam04892, VanZ, VanZ like family	NA|756aa|up_5|NC_015433.1_1311352_1313620_-	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|238aa|up_4|NC_015433.1_1313795_1314509_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|270aa|up_3|NC_015433.1_1314541_1315351_-	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|119aa|up_2|NC_015433.1_1315362_1315719_-	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|404aa|up_1|NC_015433.1_1315718_1316930_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|225aa|up_0|NC_015433.1_1317258_1317933_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	csn2|349aa|down_0|NC_015433.1_1321427_1322474_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|NC_015433.1_1322470_1322794_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|305aa|down_2|NC_015433.1_1322790_1323705_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1123aa|down_3|NC_015433.1_1323871_1327240_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|458aa|down_4|NC_015433.1_1327923_1329297_+	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|359aa|down_5|NC_015433.1_1329408_1330485_+	NA	NA|103aa|down_6|NC_015433.1_1330606_1330915_-	NA	NA|488aa|down_7|NC_015433.1_1331003_1332467_-	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|194aa|down_8|NC_015433.1_1332478_1333060_-	pfam04011, LemA, LemA family	NA|261aa|down_9|NC_015433.1_1333132_1333915_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
