assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000203195.1_ASM20319v1	NC_015215	Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069, complete genome	1	1515726-1516570	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	Type II-C,Type II-B,Type II-A	GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	12,12,11	12	TypeII-C,TypeII-B,TypeII-A	cas3,DEDDh,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	NA|173aa|up_8|NC_015215.1_1505475_1505994_-,NA|57aa|down_7|NC_015215.1_1525574_1525745_-	NA|154aa|up_9|NC_015215.1_1504984_1505446_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|173aa|up_8|NC_015215.1_1505475_1505994_-	NA	NA|158aa|up_7|NC_015215.1_1506289_1506763_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|454aa|up_6|NC_015215.1_1507061_1508423_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|78aa|up_5|NC_015215.1_1509005_1509239_-	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|481aa|up_4|NC_015215.1_1509397_1510840_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|275aa|up_3|NC_015215.1_1510926_1511751_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|159aa|up_2|NC_015215.1_1511747_1512224_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|428aa|up_1|NC_015215.1_1512216_1513500_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|612aa|up_0|NC_015215.1_1513721_1515557_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|139aa|down_0|NC_015215.1_1516653_1517070_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|127aa|down_1|NC_015215.1_1518369_1518750_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|63aa|down_2|NC_015215.1_1518761_1518950_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	csn2|222aa|down_3|NC_015215.1_1519045_1519711_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|115aa|down_4|NC_015215.1_1519697_1520042_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_5|NC_015215.1_1520038_1520905_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1371aa|down_6|NC_015215.1_1520904_1525017_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|57aa|down_7|NC_015215.1_1525574_1525745_-	NA	NA|232aa|down_8|NC_015215.1_1525746_1526442_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|down_9|NC_015215.1_1526416_1527190_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase
GCF_000203195.1_ASM20319v1	NC_015215	Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069, complete genome	2	1517213-1518237	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	Type II-C,Type II-B,Type II-A	GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	15,15,15	15	TypeII-C,TypeII-B,TypeII-A	cas3,DEDDh,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	NA|173aa|up_9|NC_015215.1_1505475_1505994_-,NA|57aa|down_6|NC_015215.1_1525574_1525745_-	NA|173aa|up_9|NC_015215.1_1505475_1505994_-	NA	NA|158aa|up_8|NC_015215.1_1506289_1506763_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|454aa|up_7|NC_015215.1_1507061_1508423_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|78aa|up_6|NC_015215.1_1509005_1509239_-	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|481aa|up_5|NC_015215.1_1509397_1510840_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|275aa|up_4|NC_015215.1_1510926_1511751_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|159aa|up_3|NC_015215.1_1511747_1512224_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|428aa|up_2|NC_015215.1_1512216_1513500_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|612aa|up_1|NC_015215.1_1513721_1515557_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|139aa|up_0|NC_015215.1_1516653_1517070_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|127aa|down_0|NC_015215.1_1518369_1518750_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|63aa|down_1|NC_015215.1_1518761_1518950_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	csn2|222aa|down_2|NC_015215.1_1519045_1519711_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|115aa|down_3|NC_015215.1_1519697_1520042_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_4|NC_015215.1_1520038_1520905_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1371aa|down_5|NC_015215.1_1520904_1525017_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|57aa|down_6|NC_015215.1_1525574_1525745_-	NA	NA|232aa|down_7|NC_015215.1_1525746_1526442_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|down_8|NC_015215.1_1526416_1527190_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|208aa|down_9|NC_015215.1_1527249_1527873_-	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
GCF_000203195.1_ASM20319v1	NC_015215	Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069, complete genome	3	1793648-1793719	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	Orphan	GTGAAAAAACAGTCCACTGGACT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	NA,NA|48aa|down_3|NC_015215.1_1795809_1795953_-,NA|216aa|down_5|NC_015215.1_1797098_1797746_-	NA|290aa|up_9|NC_015215.1_1781712_1782582_+	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|210aa|up_8|NC_015215.1_1782647_1783277_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|388aa|up_7|NC_015215.1_1783434_1784598_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|365aa|up_6|NC_015215.1_1784599_1785694_-	PRK07269, PRK07269, cystathionine gamma-synthase; Reviewed	NA|545aa|up_5|NC_015215.1_1785990_1787625_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|484aa|up_4|NC_015215.1_1787721_1789173_+	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase	NA|261aa|up_3|NC_015215.1_1789349_1790132_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|311aa|up_2|NC_015215.1_1790153_1791086_+	cd01138, FeuA, Periplasmic binding protein FeuA	NA|341aa|up_1|NC_015215.1_1791163_1792186_+	pfam01032, FecCD, FecCD transport family	NA|334aa|up_0|NC_015215.1_1792182_1793184_+	pfam01032, FecCD, FecCD transport family	NA|219aa|down_0|NC_015215.1_1793725_1794382_-	pfam08820, DUF1803, Domain of unknown function (DUF1803)	NA|172aa|down_1|NC_015215.1_1794374_1794890_-	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|244aa|down_2|NC_015215.1_1794999_1795731_+	PRK02101, PRK02101, peroxide stress protein YaaA	NA|48aa|down_3|NC_015215.1_1795809_1795953_-	NA	NA|311aa|down_4|NC_015215.1_1796016_1796949_-	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional	NA|216aa|down_5|NC_015215.1_1797098_1797746_-	NA	NA|263aa|down_6|NC_015215.1_1797800_1798589_-	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme	NA|444aa|down_7|NC_015215.1_1798662_1799994_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|263aa|down_8|NC_015215.1_1800203_1800992_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|687aa|down_9|NC_015215.1_1801026_1803087_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]
