assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000196875.2_ASM19687v2	NC_014532	Halomonas elongata DSM 2581, complete genome	1	126711-127158	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	Type I-F	GTTCGCTGCCGCCCAGGCAGCTCAGAAA,GTTCGCTGCCGCCCAGGCAGCTCAGAAA,GTTCGCTGCCGCCCAGGCAGCTCAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	6,7,7	7	TypeI-F	cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	NA,NA|93aa|down_1|NC_014532.2_128947_129226_+	NA|414aa|up_9|NC_014532.2_113802_115044_-	TIGR03644, marine_trans_1, probable ammonium transporter, marine subtype	NA|113aa|up_8|NC_014532.2_115089_115428_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|114aa|up_7|NC_014532.2_115720_116062_+	pfam04380, BMFP, Membrane fusogenic activity	NA|502aa|up_6|NC_014532.2_116154_117660_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	cas1|326aa|up_5|NC_014532.2_117922_118900_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1114aa|up_4|NC_014532.2_118896_122238_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|459aa|up_3|NC_014532.2_122630_124007_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|320aa|up_2|NC_014532.2_123999_124959_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|344aa|up_1|NC_014532.2_124976_126008_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|190aa|up_0|NC_014532.2_126011_126581_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|207aa|down_0|NC_014532.2_128216_128837_+	pfam13875, DUF4202, Domain of unknown function (DUF4202)	NA|93aa|down_1|NC_014532.2_128947_129226_+	NA	NA|419aa|down_2|NC_014532.2_129298_130555_-	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|254aa|down_3|NC_014532.2_130702_131464_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|413aa|down_4|NC_014532.2_131646_132885_+	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|440aa|down_5|NC_014532.2_132993_134313_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|336aa|down_6|NC_014532.2_134309_135317_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|235aa|down_7|NC_014532.2_135357_136062_-	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|257aa|down_8|NC_014532.2_136148_136919_-	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|482aa|down_9|NC_014532.2_136989_138435_-	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain
GCF_000196875.2_ASM19687v2	NC_014532	Halomonas elongata DSM 2581, complete genome	2	1759176-1759295	2	CRISPRCasFinder	no		cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	Orphan	AGGACCAGTGCCCGGGTACCCCGGCCGGTG	30	0	0	NA	NA	NA	1	1	Orphan	cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	NA|179aa|up_4|NC_014532.2_1753900_1754437_+,NA|108aa|down_9|NC_014532.2_1768055_1768379_+	NA|546aa|up_9|NC_014532.2_1749844_1751482_+	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I	NA|196aa|up_8|NC_014532.2_1751503_1752091_+	PRK05089, PRK05089, cytochrome C oxidase assembly protein; Provisional	NA|288aa|up_7|NC_014532.2_1752087_1752951_+	cd01665, Cyt_c_Oxidase_III, Cytochrome c oxidase subunit III	NA|65aa|up_6|NC_014532.2_1752973_1753168_-	pfam11137, DUF2909, Protein of unknown function (DUF2909)	NA|242aa|up_5|NC_014532.2_1753178_1753904_+	cd06662, SURF1, SURF1 superfamily	NA|179aa|up_4|NC_014532.2_1753900_1754437_+	NA	NA|352aa|up_3|NC_014532.2_1754458_1755514_+	pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein	NA|302aa|up_2|NC_014532.2_1755506_1756412_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|482aa|up_1|NC_014532.2_1756451_1757897_-	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter	NA|156aa|up_0|NC_014532.2_1758098_1758566_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|633aa|down_0|NC_014532.2_1759879_1761778_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|164aa|down_1|NC_014532.2_1761860_1762352_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|65aa|down_2|NC_014532.2_1762437_1762632_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|118aa|down_3|NC_014532.2_1762668_1763022_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|340aa|down_4|NC_014532.2_1763203_1764223_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|793aa|down_5|NC_014532.2_1764390_1766769_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|101aa|down_6|NC_014532.2_1766831_1767134_+	PRK00285, ihfA, integration host factor subunit alpha; Reviewed	NA|69aa|down_7|NC_014532.2_1767213_1767420_-	pfam10981, DUF2788, Protein of unknown function (DUF2788)	NA|155aa|down_8|NC_014532.2_1767537_1768002_+	PRK08105, PRK08105, flavodoxin; Provisional	NA|108aa|down_9|NC_014532.2_1768055_1768379_+	NA
GCF_000196875.2_ASM19687v2	NC_014532	Halomonas elongata DSM 2581, complete genome	3	3332655-3332754	3	CRISPRCasFinder	no		cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	Orphan	CAAGAACTCAGCACCTTGGAAAC	23	0	0	NA	NA	NA	1	1	Orphan	cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	NA,NA|129aa|down_0|NC_014532.2_3332891_3333278_-	NA|289aa|up_9|NC_014532.2_3324282_3325149_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|326aa|up_8|NC_014532.2_3325277_3326255_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|223aa|up_7|NC_014532.2_3326251_3326920_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|456aa|up_6|NC_014532.2_3326916_3328284_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|218aa|up_5|NC_014532.2_3328375_3329029_+	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional	NA|77aa|up_4|NC_014532.2_3329115_3329346_+	pfam06005, ZapB, Cell division protein ZapB	NA|155aa|up_3|NC_014532.2_3329354_3329819_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|278aa|up_2|NC_014532.2_3329811_3330645_-	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|104aa|up_1|NC_014532.2_3330641_3330953_-	PRK11628, PRK11628, transcriptional regulator BolA; Provisional	NA|471aa|up_0|NC_014532.2_3330981_3332394_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|129aa|down_0|NC_014532.2_3332891_3333278_-	NA	NA|518aa|down_1|NC_014532.2_3333434_3334988_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|366aa|down_2|NC_014532.2_3335087_3336186_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|528aa|down_3|NC_014532.2_3336450_3338034_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|528aa|down_4|NC_014532.2_3338256_3339840_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|309aa|down_5|NC_014532.2_3339894_3340821_+	PRK09471, oppB, oligopeptide ABC transporter permease OppB	NA|309aa|down_6|NC_014532.2_3340841_3341768_+	PRK15406, PRK15406, oligopeptide ABC transporter permease OppC; Provisional	NA|533aa|down_7|NC_014532.2_3341777_3343376_+	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]	NA|375aa|down_8|NC_014532.2_3343635_3344760_+	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane]	NA|446aa|down_9|NC_014532.2_3344904_3346242_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)
GCF_000196875.2_ASM19687v2	NC_014532	Halomonas elongata DSM 2581, complete genome	4	3712097-3712185	4	CRISPRCasFinder	no		cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	Orphan	GCCGTGACAGGTCGGGCAGGTCT	23	0	0	NA	NA	NA	1	1	Orphan	cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csa3,DEDDh,DinG,WYL,cas3	NA,NA	NA|382aa|up_9|NC_014532.2_3702047_3703193_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|269aa|up_8|NC_014532.2_3703488_3704295_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|328aa|up_7|NC_014532.2_3704441_3705425_+	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|301aa|up_6|NC_014532.2_3705401_3706304_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|94aa|up_5|NC_014532.2_3706334_3706616_-	pfam09981, DUF2218, Uncharacterized protein conserved in bacteria (DUF2218)	NA|376aa|up_4|NC_014532.2_3706911_3708039_+	cd01139, TroA_f, Periplasmic binding protein TroA_f	NA|362aa|up_3|NC_014532.2_3708040_3709126_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|250aa|up_2|NC_014532.2_3709119_3709869_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|300aa|up_1|NC_014532.2_3709846_3710746_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|211aa|up_0|NC_014532.2_3710742_3711375_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|645aa|down_0|NC_014532.2_3712763_3714698_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|210aa|down_1|NC_014532.2_3714825_3715455_-	PRK14150, PRK14150, heat shock protein GrpE; Provisional	NA|558aa|down_2|NC_014532.2_3715677_3717351_+	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|149aa|down_3|NC_014532.2_3717429_3717876_-	PRK09462, fur, ferric uptake regulator; Provisional	NA|153aa|down_4|NC_014532.2_3717909_3718368_+	pfam04355, SmpA_OmlA, SmpA / OmlA family	NA|105aa|down_5|NC_014532.2_3718375_3718690_-	pfam03658, Ub-RnfH, RnfH family Ubiquitin	NA|145aa|down_6|NC_014532.2_3718679_3719114_-	cd07813, COQ10p_like, Coenzyme Q-binding protein COQ10p and similar proteins	NA|164aa|down_7|NC_014532.2_3719243_3719735_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|77aa|down_8|NC_014532.2_3720322_3720553_+	pfam07867, DUF1654, Protein of unknown function (DUF1654)	NA|61aa|down_9|NC_014532.2_3721072_3721255_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,
