The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	224105	232859	2088772		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|224105_224945_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
WP_000835715.1|224929_225757_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.8e-22
WP_000712136.1|225753_226299_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227958.1|226309_227131_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170193.1|227172_228456_-	insulinase family protein	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	29.5	7.1e-17
WP_000424257.1|228452_229703_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.1	6.0e-93
WP_000455903.1|229861_230230_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266662.1|230232_231330_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|231380_232859_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
>prophage 2
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	258772	267373	2088772	integrase	Streptococcus_phage(57.14%)	10	259003:259017	273845:273859
WP_000424684.1|258772_259378_-	Rha family transcriptional regulator	NA	A0A192Y918	Salmonella_phage	34.1	6.8e-18
259003:259017	attL	ATGATTTGATAGCTT	NA	NA	NA	NA
WP_013193355.1|259399_259777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001241280.1|259851_260043_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001814778.1|260246_260963_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFG5	Streptococcus_phage	63.0	2.6e-77
WP_000666926.1|260981_261650_+	zinc ribbon domain-containing protein	NA	A0A141DZS3	Streptococcus_phage	74.1	8.4e-78
WP_000222518.1|261788_262457_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	24.6	9.2e-08
WP_000255647.1|262919_263378_-	hypothetical protein	NA	A0A1X9I5V5	Streptococcus_phage	46.0	5.6e-25
WP_000417039.1|264800_265106_+	protein rep	NA	NA	NA	NA	NA
WP_000422980.1|265210_265771_+	multidrug DMT transporter	NA	A0A1W6JPJ7	Morganella_phage	56.1	4.6e-21
WP_000704676.1|266206_267373_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	51.5	2.0e-103
273845:273859	attR	AAGCTATCAAATCAT	NA	NA	NA	NA
>prophage 3
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	304488	315799	2088772		Synechococcus_phage(33.33%)	7	NA	NA
WP_000668291.1|304488_306642_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	1.0e-44
WP_000801611.1|306654_308004_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_000043310.1|308173_308881_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.3e-41
WP_000361217.1|308937_312663_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.8	1.6e-37
WP_000220632.1|312755_314198_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.7e-55
WP_000182580.1|314234_315257_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.2	7.3e-65
WP_000717501.1|315253_315799_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	9.7e-24
>prophage 4
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	357160	398595	2088772	bacteriocin,transposase,tRNA	Streptococcus_phage(40.0%)	42	NA	NA
WP_001814919.1|357160_358507_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_001257240.1|359578_359776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000808434.1|360012_361077_-	membrane protein	NA	NA	NA	NA	NA
WP_001229057.1|361139_362051_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_000198675.1|362043_362637_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000273854.1|362623_362950_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000744897.1|363088_364255_-	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_000096202.1|364312_365470_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_001035700.1|365511_367362_+	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	30.5	7.6e-28
WP_025168890.1|367257_367662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200898.1|367711_368344_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000500038.1|368365_369238_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
WP_000838912.1|369246_369918_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA	NA
WP_000836450.1|370159_370747_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	56.7	1.6e-27
WP_001189285.1|370798_371119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073077611.1|371525_371819_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000723961.1|371873_373982_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571330.1|373978_374620_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	4.3e-23
WP_001038474.1|374826_375633_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_099516442.1|375598_376069_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001189278.1|376358_376679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424418.1|377437_377806_+|bacteriocin	SP_0115 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_001268157.1|378204_379068_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000915345.1|379533_379872_+	peptidase C39	NA	NA	NA	NA	NA
WP_000973716.1|380499_380712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424467.1|381127_381490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000356083.1|381470_381716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814711.1|381872_382931_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000792250.1|383246_384224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424474.1|384600_384975_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619753.1|385182_386085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424439.1|386140_386494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072924.1|386490_387219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770314.1|388353_388593_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	54.1	7.2e-16
WP_001035384.1|389142_391317_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282969.1|391717_392839_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193634.1|392979_393435_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|393444_395358_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331983.1|395710_397390_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639589.1|397391_397625_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000282479.1|397904_398120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974047.1|398442_398595_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
>prophage 5
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	443233	451059	2088772		Streptococcus_phage(75.0%)	13	NA	NA
WP_001107589.1|443233_443947_-	helix-turn-helix domain-containing protein	NA	Q708R9	Streptococcus_phage	51.9	2.0e-16
WP_000090006.1|444099_444330_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	3.7e-09
WP_000424665.1|444345_444972_+	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	40.8	2.1e-30
WP_000141100.1|445343_445796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000174331.1|445792_445993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001003774.1|445994_446210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000058832.1|446206_446548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000492137.1|446540_446822_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	67.8	7.9e-30
WP_000158192.1|446956_447823_+	primase alpha helix C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	75.0	8.2e-126
WP_000434359.1|447875_449345_+	DNA primase family protein	NA	Q9AZI5	Lactococcus_phage	35.0	2.3e-64
WP_000865230.1|449697_449865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000173130.1|449948_450479_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	48.7	2.8e-36
WP_000811078.1|450549_451059_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	53.9	5.8e-47
>prophage 6
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	574254	628873	2088772	transposase,integrase,holin,protease	Streptococcus_phage(23.08%)	47	577102:577115	630255:630268
WP_001063386.1|574254_576360_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.5	1.0e-116
WP_000032550.1|576655_577138_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
577102:577115	attL	CAAGTTCAAAACTT	NA	NA	NA	NA
WP_000743611.1|577232_578717_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156827.1|578869_580477_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_033607364.1|580641_580809_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
WP_000091091.1|581545_582991_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	60.3	2.8e-134
WP_000565355.1|582992_583724_+	capsular polysaccharide biosynthesis protein Cps4B	NA	NA	NA	NA	NA
WP_000664155.1|583732_584425_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	58.5	3.2e-64
WP_001142556.1|584434_585124_+	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	63.7	1.1e-72
WP_001291065.1|585138_586500_+	sugar transferase	NA	NA	NA	NA	NA
WP_001005725.1|586505_587249_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_001076780.1|587245_588070_+	LicD family protein	NA	A0A1V0SD50	Indivirus	38.2	4.0e-05
WP_000458862.1|588071_588950_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000221687.1|588950_590285_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_001085099.1|590312_591737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000723325.1|591801_592890_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	30.2	1.6e-25
WP_000676130.1|593052_593922_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	63.2	2.0e-100
WP_001282454.1|593922_594516_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	32.3	3.3e-09
WP_000141493.1|594527_595577_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	44.5	1.4e-71
WP_000600909.1|595642_596494_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.8	8.6e-27
WP_000842782.1|597979_599962_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001032472.1|600262_605566_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001041857.1|605731_607891_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_000248773.1|607887_608484_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	1.5e-17
WP_000179553.1|608550_609078_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_000200644.1|609147_609489_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711398.1|609974_611132_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039290.1|611144_612539_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158792.1|612614_614039_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	2.7e-41
WP_000518011.1|614050_614740_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000698035.1|614837_615800_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000771129.1|615818_616817_+|holin	choline-binding protein CbpJ	holin	NA	NA	NA	NA
WP_000765684.1|616934_618167_-	MFS transporter	NA	NA	NA	NA	NA
WP_001809487.1|618325_618796_-	lanthionine synthetase	NA	NA	NA	NA	NA
WP_000619581.1|619716_620046_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000163315.1|620167_621046_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373457.1|621027_621981_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562413.1|621967_622975_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210618.1|622958_623969_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224637.1|624045_624744_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743674.1|624740_625736_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698434.1|625749_626382_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001808881.1|626382_626625_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_075218974.1|626549_626861_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_000754501.1|627301_627541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073078456.1|627585_628215_+|protease	serine protease	protease	NA	NA	NA	NA
WP_000378123.1|628513_628873_+|integrase	tyrosine-type recombinase/integrase	integrase	C9E2L6	Enterococcus_phage	41.0	1.4e-18
630255:630268	attR	CAAGTTCAAAACTT	NA	NA	NA	NA
>prophage 7
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	700432	763326	2088772	bacteriocin,transposase,tRNA,protease	Klosneuvirus(18.18%)	55	NA	NA
WP_001810089.1|700432_700603_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000628994.1|701256_702480_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_001059636.1|702646_703969_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000236908.1|703970_705857_+	DUF4838 domain-containing protein	NA	NA	NA	NA	NA
WP_000836781.1|706024_706369_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000429402.1|706378_707791_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_000359753.1|707859_709539_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001809506.1|709664_711104_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691685.1|711107_712457_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|712644_713493_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403169.1|713507_714056_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693286.1|714062_714320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656522.1|714421_716104_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	3.4e-19
WP_001148103.1|716088_716919_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181373.1|717111_717615_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185835.1|718067_718631_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_000678704.1|718644_719271_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867296.1|719297_719687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333653.1|719691_720141_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000418402.1|720268_720856_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105242.1|721245_722853_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	8.9e-142
WP_000026631.1|723411_725043_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795202.1|725331_730272_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|730361_731558_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119900.1|731693_732221_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659547.1|732297_732654_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_001122904.1|732690_734037_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|734132_734252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001220743.1|734818_736099_+	restriction endonuclease subunit S	NA	A0A1V0SKS6	Klosneuvirus	29.8	5.3e-12
WP_000651177.1|736155_736953_+	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.3e-21
WP_061087362.1|736963_737569_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000187226.1|737516_739085_-	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	25.6	1.0e-12
WP_000029054.1|739084_740548_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229085.1|740560_742894_-	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	28.9	2.0e-25
WP_001088687.1|743501_744011_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255769.1|744174_745209_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|745235_745760_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|746239_748063_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000115730.1|748075_748429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066299.1|748633_749770_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.0	1.2e-23
WP_001808905.1|750091_750286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777760.1|750447_750735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278301.1|750744_751155_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889923.1|751222_751954_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653752.1|751950_753000_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132575.1|753167_753497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682122.1|753772_754111_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219126.1|754115_754853_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000275284.1|754865_756206_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_001821303.1|756445_757792_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_000358814.1|757958_758114_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069099.1|758170_759532_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_001093269.1|761075_761324_+|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000483697.1|761339_761549_+|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000497530.1|762750_763326_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 8
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	993637	1000643	2088772		Streptococcus_phage(42.86%)	10	NA	NA
WP_000405832.1|993637_994132_+	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_001170347.1|994131_994662_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
WP_000889093.1|994655_995012_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001103449.1|995169_995970_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000590990.1|995969_996713_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	2.8e-29
WP_000926600.1|996790_997015_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000272311.1|997080_997992_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	2.9e-89
WP_000855734.1|998029_998758_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_001272941.1|998802_999414_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000930003.1|999926_1000643_+	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	30.9	2.1e-26
>prophage 9
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	1114336	1177410	2088772	transposase,holin,protease	Indivirus(15.79%)	57	NA	NA
WP_000895725.1|1114336_1115236_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_001814694.1|1115279_1116806_-	ABC-F family ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.9	1.3e-09
WP_000773235.1|1117564_1118107_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000244451.1|1118106_1118736_+	endonuclease III	NA	NA	NA	NA	NA
WP_000850024.1|1118946_1119468_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_001293845.1|1119486_1120410_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	8.7e-25
WP_000166701.1|1120459_1121539_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.9	6.3e-59
WP_001126406.1|1121851_1125028_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_001199645.1|1125302_1126112_-|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	30.3	4.5e-09
WP_000811992.1|1126113_1126917_-|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	5.3e-10
WP_000835917.1|1126926_1128414_-	type IV teichoic acid flippase TacF	NA	NA	NA	NA	NA
WP_000638502.1|1128749_1129457_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000609885.1|1129461_1130484_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_000411215.1|1130500_1131370_+|holin	choline kinase LicA	holin	NA	NA	NA	NA
WP_000837618.1|1131359_1132238_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000643970.1|1132249_1132939_+	NTP transferase domain-containing protein	NA	A0A127AW70	Bacillus_phage	45.0	3.4e-05
WP_000705301.1|1133034_1133883_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	39.1	1.2e-33
WP_001812883.1|1134764_1135808_+	TIGR00341 family protein	NA	NA	NA	NA	NA
WP_000179644.1|1135974_1138062_+	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	37.6	1.0e-105
WP_001237223.1|1138167_1138527_+	YbaN family protein	NA	NA	NA	NA	NA
WP_000638786.1|1138619_1139252_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000461600.1|1139295_1139952_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_001010953.1|1139970_1140603_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_000225489.1|1140630_1141065_+	DNA topoisomerase I	NA	NA	NA	NA	NA
WP_001074730.1|1141076_1142114_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_000762426.1|1142110_1142380_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_000929149.1|1142383_1142743_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_001042415.1|1143693_1145625_+	McrB family protein	NA	K4I1H4	Acidithiobacillus_phage	33.7	1.8e-16
WP_001816429.1|1145611_1146928_+	McrC family protein	NA	NA	NA	NA	NA
WP_000931158.1|1147102_1148089_+	GMP reductase	NA	G3MBI2	Bacillus_virus	72.2	1.4e-137
WP_000661503.1|1148406_1149105_+	ribonuclease III	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	33.3	1.1e-24
WP_000280942.1|1149095_1152635_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_000153016.1|1152631_1153426_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000763457.1|1153425_1154244_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000522312.1|1154247_1155537_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_000096139.1|1155580_1157068_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	33.0	4.9e-70
WP_001096313.1|1157216_1157957_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.1	2.0e-32
WP_000726258.1|1157956_1160122_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA	NA
WP_000792112.1|1160291_1161245_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000610410.1|1161321_1163310_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
WP_000639833.1|1163319_1163883_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000237188.1|1163848_1164337_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000091545.1|1164409_1164877_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
WP_000159178.1|1164873_1165389_-	transcription repressor NadR	NA	NA	NA	NA	NA
WP_001097402.1|1165400_1165928_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000747408.1|1166223_1166787_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001284130.1|1166770_1167322_-	phosphopantothenoylcysteine decarboxylase	NA	A0A068EHP1	Penguinpox_virus	37.6	5.2e-25
WP_000699489.1|1167333_1168023_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_000845287.1|1168252_1169923_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_000886147.1|1170251_1171427_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_000722076.1|1171481_1172186_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	2.8e-39
WP_000886210.1|1172178_1173528_+	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.6	1.8e-34
WP_001289493.1|1173529_1174339_+	MBL fold metallo-hydrolase	NA	A0A0C5AFC1	Paenibacillus_phage	39.0	1.8e-34
WP_000208080.1|1174429_1174672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001812387.1|1174673_1174928_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000731129.1|1174974_1175748_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	48.6	8.9e-23
WP_001814919.1|1176063_1177410_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
>prophage 10
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	1422020	1475335	2088772	holin,protease,tRNA,bacteriocin,transposase,integrase	Streptococcus_phage(44.44%)	45	1473824:1473883	1476229:1476771
WP_000083731.1|1422020_1423355_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001166874.1|1423541_1424420_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	1.7e-115
WP_000358228.1|1424422_1424740_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_000806706.1|1424779_1425670_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
WP_000033363.1|1425666_1426305_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	2.2e-75
WP_000689706.1|1426524_1427322_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	8.0e-59
WP_000254684.1|1427325_1428588_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.3	4.2e-139
WP_001844793.1|1428597_1429728_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000728257.1|1429807_1431691_-|holin	phosphorylcholine esterase CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	23.7	9.5e-10
WP_000403195.1|1431693_1432581_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	1.3e-09
WP_000745389.1|1432570_1433032_-	signal peptidase II	NA	NA	NA	NA	NA
WP_001025704.1|1433028_1433937_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
WP_001809535.1|1433929_1434127_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000745372.1|1434178_1434850_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000602451.1|1434903_1435125_-|bacteriocin	SP_0924 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000593571.1|1435396_1436206_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001246755.1|1436386_1437262_-	N-carbamoylputrescine amidase	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.1e-77
WP_000969458.1|1437271_1438357_-	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	48.1	2.8e-91
WP_000764377.1|1438353_1439481_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_000088782.1|1439480_1440740_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_000366713.1|1440736_1441597_-	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_001270407.1|1441627_1441765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000661006.1|1442532_1444008_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_001153814.1|1444714_1445590_+|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	31.3	8.0e-28
WP_029645384.1|1445585_1446164_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA	NA
WP_000489404.1|1446206_1448195_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000173358.1|1448196_1448955_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	7.7e-27
WP_000680766.1|1449382_1449574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085044.1|1449927_1450200_-	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_000778595.1|1450258_1450708_-	SprT family protein	NA	NA	NA	NA	NA
WP_000359141.1|1450694_1452824_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_000123613.1|1453235_1454141_+	permease	NA	NA	NA	NA	NA
WP_000617843.1|1454137_1454953_+	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_000759775.1|1455082_1455799_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000749599.1|1456747_1457620_-	DUF4300 family protein	NA	NA	NA	NA	NA
WP_001821303.1|1459131_1460478_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_001042807.1|1460980_1462486_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_000820836.1|1462544_1463552_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_000561516.1|1463634_1466736_-	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.8	6.8e-114
WP_001212037.1|1467082_1469356_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_001042996.1|1469372_1469843_+	arginine repressor	NA	NA	NA	NA	NA
WP_000692989.1|1469959_1470115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000526343.1|1470385_1473736_-	DEAD/DEAH box helicase family protein	NA	A0A2H4P9W3	Gordonia_phage	24.8	1.4e-11
WP_000466655.1|1473765_1474347_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
1473824:1473883	attL	AATTGTGATTTGTCGATCTGAACTACAAAGTCTGCGAACTCATTTTGGAGGGCTAGTGGG	NA	NA	NA	NA
WP_000444456.1|1474369_1475335_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.8e-33
WP_000444456.1|1474369_1475335_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.8e-33
1476229:1476771	attR	AATTGTGATTTGTCGATCTGAACTACAAAGTCTGCGAACTCATTTTGGAGGGCTAGTGGGGGGAGGGGGAGAAGTATTTTTTTTAATTTTGTAATTGGTAACTGAGGCTGAGCACTTCCTGATATCACTCGACTATAATTATTATTCCTTAAAACATGGATAATAAATTTCTGATTTAGATTTGGTGTCTTGGGACGTAATATTACCATACCTGAATTTATACGTAAATGTTTATATTTTATTAATTCATCGTAGTACGCTACATTTCCAACAGTACCTCTTGTTGTCAAGACTATATCATAACGCTCAAGTTTGCCTTTTCGAAGTAATTTATCCTTTGTTTTAGTGATAAATTGCTTTGTATCGAATGAAAATCCGTTTTTAGTAACATTCTTTGTATTTAAAAATAAACAGTACTCCTCACTAAACAACTCATCTGATTTAGGATAATTTTTGCCCCTATCACCATCTATAATATCAAATAAGTTATCAATGCTTTCAAATATTTTATTTTCCCCAAACATCTCGTTAAATCGGGATTTG	NA	NA	NA	NA
>prophage 11
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	1537658	1601740	2088772	transposase,tRNA,protease	Streptococcus_phage(20.0%)	59	NA	NA
WP_000882517.1|1537658_1539917_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	40.4	4.6e-128
WP_000767193.1|1541689_1541989_+	DUF1827 family protein	NA	NA	NA	NA	NA
WP_000064821.1|1545761_1547489_-	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_000134044.1|1547570_1549517_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	45.3	6.1e-145
WP_001809365.1|1549531_1550095_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000241397.1|1550179_1550734_-	DJ-1/PfpI family protein	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	27.2	6.4e-07
WP_000830659.1|1550744_1551968_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_000848713.1|1552004_1554455_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	47.5	8.4e-200
WP_000411851.1|1554654_1555584_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_001145226.1|1555723_1556011_+	DUF3270 domain-containing protein	NA	NA	NA	NA	NA
WP_000491790.1|1556044_1557379_-	two-component system sensor histidine kinase CiaH	NA	Q8QNA2	Ectocarpus_siliculosus_virus	34.0	1.2e-06
WP_000590640.1|1557368_1558043_-	two-component system response regulator CiaR	NA	W8CYM9	Bacillus_phage	33.6	3.1e-27
WP_001149107.1|1558151_1560698_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	27.2	7.4e-74
WP_000188827.1|1560820_1561261_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_001245817.1|1561235_1562105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000403351.1|1562082_1562583_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000167112.1|1562593_1563292_-	3-oxoacyl-ACP reductase	NA	A0A0K0KVL6	Prochlorococcus_phage	30.9	2.8e-07
WP_001808490.1|1563284_1563551_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_001269466.1|1563616_1564543_-	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA	NA
WP_000738401.1|1564617_1565433_-	membrane protein	NA	NA	NA	NA	NA
WP_000665420.1|1565436_1565757_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001291375.1|1566312_1568310_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	30.8	4.7e-84
WP_001180425.1|1568433_1569693_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000811482.1|1569694_1570396_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	43.9	4.0e-38
WP_000728653.1|1570379_1571579_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_001209571.1|1571864_1573211_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_000709032.1|1573407_1573944_+	biotin transporter BioY	NA	NA	NA	NA	NA
WP_000807422.1|1574149_1574365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001216108.1|1574462_1574783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001196049.1|1574812_1575151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000686921.1|1575162_1575882_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_001105899.1|1575871_1576390_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000819181.1|1576420_1577209_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001816270.1|1577755_1579102_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	3.4e-78
WP_001040724.1|1579562_1580759_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_000348122.1|1581669_1582539_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248982.1|1582761_1583283_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_001821371.1|1583254_1584346_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_000935666.1|1584456_1584711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200308.1|1585050_1585584_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001811210.1|1585570_1585786_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001811209.1|1585752_1585896_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000121714.1|1586129_1587848_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.2	3.4e-272
WP_000434649.1|1587958_1588306_+	thioredoxin	NA	NA	NA	NA	NA
WP_000759189.1|1588584_1589421_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000891765.1|1589433_1590063_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	6.8e-29
WP_000120830.1|1590072_1590714_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_001065958.1|1590859_1592089_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_000435455.1|1592078_1593245_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000665621.1|1593388_1594402_+	lactonase family protein	NA	NA	NA	NA	NA
WP_000068050.1|1594446_1594866_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_000094364.1|1594876_1596283_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_000301210.1|1596368_1597247_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_000996639.1|1597262_1598768_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_000359036.1|1598782_1599319_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_000558554.1|1599318_1599813_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_000392851.1|1599826_1600543_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_001054562.1|1600577_1600778_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_001153892.1|1600852_1601740_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	31.3	6.2e-28
>prophage 12
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	1656627	1663386	2088772	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081004.1|1656627_1657596_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	99.2	1.8e-65
WP_000011306.1|1657629_1658541_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
WP_001231086.1|1658537_1659515_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163033.1|1659511_1660402_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
WP_001140412.1|1660453_1660834_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|1660844_1661432_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_001814787.1|1661440_1662673_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.7	4.2e-131
WP_000442260.1|1662709_1662880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162475.1|1662879_1663386_-	dihydrofolate reductase	NA	A0A1B2IAU3	Erwinia_phage	31.1	7.4e-18
>prophage 13
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	1916453	1923868	2088772		uncultured_Mediterranean_phage(33.33%)	10	NA	NA
WP_001814725.1|1916453_1917173_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.2	4.7e-34
WP_001838026.1|1917169_1917364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000778475.1|1917660_1918620_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	2.4e-57
WP_001193665.1|1918609_1919566_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764303.1|1919562_1920315_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	5.6e-14
WP_000858251.1|1920410_1921376_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000821615.1|1921600_1921843_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	7.8e-18
WP_001222228.1|1921842_1922565_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000105310.1|1922551_1923121_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
WP_000351913.1|1923139_1923868_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	4.1e-09
>prophage 14
NC_014251	Streptococcus pneumoniae TCH8431/19A, complete sequence	2088772	2005333	2034754	2088772	bacteriocin,transposase,integrase	Streptococcus_phage(89.29%)	33	1997034:1997049	2037298:2037313
1997034:1997049	attL	AATAATCACTGCACCA	NA	NA	NA	NA
WP_000420682.1|2005333_2005648_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|2005663_2006050_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813494.1|2006078_2007464_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	99.8	1.9e-265
WP_000879507.1|2007466_2007619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814870.1|2007641_2008904_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	99.0	3.1e-230
WP_029645760.1|2008848_2009061_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	78.7	1.5e-12
WP_001814874.1|2009109_2009193_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001038795.1|2009317_2010055_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	3.1e-134
WP_000019067.1|2010311_2011559_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	23.9	3.9e-12
WP_001009056.1|2011738_2011960_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|2012076_2012574_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|2012548_2013055_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|2013038_2015486_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_001814875.1|2015488_2017666_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	98.6	0.0e+00
WP_000769868.1|2017662_2018664_+	bifunctional lysozyme/C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|2018660_2019593_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|2019837_2019954_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691729.1|2019969_2021889_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	97.3	0.0e+00
WP_001813542.1|2022252_2022498_+	hypothetical protein	NA	A0A1B0RXA7	Streptococcus_phage	98.8	2.6e-37
WP_000806926.1|2022494_2022830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000567222.1|2022842_2023211_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	97.5	1.1e-58
WP_001072467.1|2023197_2023497_+	hypothetical protein	NA	A0A1B0RX98	Streptococcus_phage	96.0	1.8e-48
WP_000420313.1|2023614_2025078_-	ABC-F type ribosomal protection protein Msr(D)	NA	A0A1B0RXA0	Streptococcus_phage	97.3	3.7e-251
WP_000417519.1|2025197_2026415_-	macrolide efflux MFS transporter Mef(A)	NA	A0A2K5B2B5	Erysipelothrix_phage	90.6	5.1e-198
WP_000873143.1|2026800_2026971_-	hypothetical protein	NA	A0A1X9I6E4	Streptococcus_phage	98.2	3.7e-22
WP_001860868.1|2027492_2027684_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	69.4	5.4e-14
WP_001227347.1|2027743_2028097_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|2028601_2029024_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|2029020_2029251_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|2029711_2029915_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|2029996_2031214_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000732395.1|2032104_2034120_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571425.1|2034121_2034754_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.9	2.8e-22
2037298:2037313	attR	AATAATCACTGCACCA	NA	NA	NA	NA
