assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	1	180723-180820	1	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	CGTCATTCCCGCGCAGGCGGGAATC	25	0	0	NA	NA	I-E	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|136aa|up_9|NC_014752.1_169768_170176_-,NA|76aa|up_2|NC_014752.1_177407_177635_-,NA|55aa|down_2|NC_014752.1_183466_183631_+,NA|63aa|down_3|NC_014752.1_183700_183889_-	NA|136aa|up_9|NC_014752.1_169768_170176_-	NA	NA|231aa|up_8|NC_014752.1_170354_171047_+	pfam05315, ICEA, ICEA Protein	NA|335aa|up_7|NC_014752.1_171043_172048_+	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|133aa|up_6|NC_014752.1_172119_172518_+	pfam09019, EcoRII-C, EcoRII C terminal	NA|314aa|up_5|NC_014752.1_172518_173460_+	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|462aa|up_4|NC_014752.1_173539_174925_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|797aa|up_3|NC_014752.1_175020_177411_-	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|76aa|up_2|NC_014752.1_177407_177635_-	NA	NA|291aa|up_1|NC_014752.1_177674_178547_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|679aa|up_0|NC_014752.1_178634_180671_+	COG0339, Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism]	NA|189aa|down_0|NC_014752.1_181095_181662_-	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|149aa|down_1|NC_014752.1_182170_182617_-	pfam00114, Pilin, Pilin (bacterial filament)	NA|55aa|down_2|NC_014752.1_183466_183631_+	NA	NA|63aa|down_3|NC_014752.1_183700_183889_-	NA	NA|505aa|down_4|NC_014752.1_183965_185480_-	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase	NA|448aa|down_5|NC_014752.1_185828_187172_+	COG1508, RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription]	NA|405aa|down_6|NC_014752.1_189061_190276_-	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|416aa|down_7|NC_014752.1_190477_191725_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|79aa|down_8|NC_014752.1_191891_192128_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|336aa|down_9|NC_014752.1_192358_193366_+	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	2	341225-341400	2	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	CGTCATTCCCGCGCAGGCGGGAATC	25	1	3	341324-341374|341324-341374|341324-341374	NC_014752.1_341052-341102|NC_014752.1_341594-341644|NC_014752.1_2003025-2002975	I-E	2	2	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|82aa|up_0|NC_014752.1_340373_340619_+,NA|64aa|down_8|NC_014752.1_352895_353087_+	NA|89aa|up_9|NC_014752.1_326483_326750_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|228aa|up_8|NC_014752.1_326907_327591_+	cd10433, YccA_like, YccA-like proteins	NA|171aa|up_7|NC_014752.1_327714_328227_+	TIGR01510, Phosphopantetheine_adenylyltransferase, pantetheine-phosphate adenylyltransferase, bacterial	NA|488aa|up_6|NC_014752.1_328361_329825_-	NF033477, EmaA_autotrans, collagen-binding adhesin autotransporter EmaA	NA|119aa|up_5|NC_014752.1_336695_337052_-	pfam07239, OpcA, Outer membrane protein OpcA	NA|352aa|up_4|NC_014752.1_337459_338515_+	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated	NA|163aa|up_3|NC_014752.1_338582_339071_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|159aa|up_2|NC_014752.1_339345_339822_-	COG2954, COG2954, Uncharacterized protein conserved in bacteria [Function unknown]	NA|142aa|up_1|NC_014752.1_339833_340259_-	COG1981, COG1981, Predicted membrane protein [Function unknown]	NA|82aa|up_0|NC_014752.1_340373_340619_+	NA	NA|620aa|down_0|NC_014752.1_342039_343899_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|489aa|down_1|NC_014752.1_344128_345595_+	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|323aa|down_2|NC_014752.1_345795_346764_-	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown]	NA|431aa|down_3|NC_014752.1_346840_348133_+	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|229aa|down_4|NC_014752.1_348671_349358_-	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter	NA|158aa|down_5|NC_014752.1_349433_349907_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|391aa|down_6|NC_014752.1_350186_351359_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|509aa|down_7|NC_014752.1_351382_352909_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|64aa|down_8|NC_014752.1_352895_353087_+	NA	NA|78aa|down_9|NC_014752.1_353158_353392_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	3	341495-341593	3	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	CGTCATTCCCGCGCAGGCGGGAATC	25	0	0	NA	NA	I-E	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|82aa|up_0|NC_014752.1_340373_340619_+,NA|64aa|down_8|NC_014752.1_352895_353087_+	NA|89aa|up_9|NC_014752.1_326483_326750_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|228aa|up_8|NC_014752.1_326907_327591_+	cd10433, YccA_like, YccA-like proteins	NA|171aa|up_7|NC_014752.1_327714_328227_+	TIGR01510, Phosphopantetheine_adenylyltransferase, pantetheine-phosphate adenylyltransferase, bacterial	NA|488aa|up_6|NC_014752.1_328361_329825_-	NF033477, EmaA_autotrans, collagen-binding adhesin autotransporter EmaA	NA|119aa|up_5|NC_014752.1_336695_337052_-	pfam07239, OpcA, Outer membrane protein OpcA	NA|352aa|up_4|NC_014752.1_337459_338515_+	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated	NA|163aa|up_3|NC_014752.1_338582_339071_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|159aa|up_2|NC_014752.1_339345_339822_-	COG2954, COG2954, Uncharacterized protein conserved in bacteria [Function unknown]	NA|142aa|up_1|NC_014752.1_339833_340259_-	COG1981, COG1981, Predicted membrane protein [Function unknown]	NA|82aa|up_0|NC_014752.1_340373_340619_+	NA	NA|620aa|down_0|NC_014752.1_342039_343899_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|489aa|down_1|NC_014752.1_344128_345595_+	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|323aa|down_2|NC_014752.1_345795_346764_-	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown]	NA|431aa|down_3|NC_014752.1_346840_348133_+	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|229aa|down_4|NC_014752.1_348671_349358_-	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter	NA|158aa|down_5|NC_014752.1_349433_349907_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|391aa|down_6|NC_014752.1_350186_351359_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|509aa|down_7|NC_014752.1_351382_352909_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|64aa|down_8|NC_014752.1_352895_353087_+	NA	NA|78aa|down_9|NC_014752.1_353158_353392_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	4	669881-669980	4	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	GTCATTCTCGCGCAGGCGGGAATCCAG	27	1	2	669908-669953|669908-669953	NC_014752.1_682953-682998|NC_014752.1_683524-683569	I-E	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|112aa|up_4|NC_014752.1_666519_666855_-,NA|48aa|up_0|NC_014752.1_669564_669708_-,NA|383aa|down_0|NC_014752.1_670409_671558_+,NA|50aa|down_6|NC_014752.1_681049_681199_+	NA|252aa|up_9|NC_014752.1_659708_660464_-	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|391aa|up_8|NC_014752.1_660641_661814_-	TIGR02376, Copper-containing_nitrite_reductase, nitrite reductase, copper-containing	NA|752aa|up_7|NC_014752.1_662185_664441_+	COG3256, NorB, Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]	NA|396aa|up_6|NC_014752.1_664541_665729_-	PRK11253, ldcA, L,D-carboxypeptidase A; Provisional	NA|135aa|up_5|NC_014752.1_665768_666173_-	pfam01230, HIT, HIT domain	NA|112aa|up_4|NC_014752.1_666519_666855_-	NA	NA|146aa|up_3|NC_014752.1_667082_667520_-	PRK00203, rnhA, ribonuclease H; Reviewed	NA|290aa|up_2|NC_014752.1_667632_668502_+	PRK12335, PRK12335, tellurite resistance protein TehB; Provisional	NA|269aa|up_1|NC_014752.1_668551_669358_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|48aa|up_0|NC_014752.1_669564_669708_-	NA	NA|383aa|down_0|NC_014752.1_670409_671558_+	NA	NA|471aa|down_1|NC_014752.1_673364_674777_-	PRK09496, trkA, Trk system potassium transporter TrkA	NA|508aa|down_2|NC_014752.1_674874_676398_-	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion]	NA|213aa|down_3|NC_014752.1_677184_677823_+	cd01916, ACS_1, Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA	NA|543aa|down_4|NC_014752.1_677822_679451_+	PRK06263, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|418aa|down_5|NC_014752.1_679447_680701_+	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]	NA|50aa|down_6|NC_014752.1_681049_681199_+	NA	NA|484aa|down_7|NC_014752.1_681208_682660_+	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|95aa|down_8|NC_014752.1_683208_683493_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|986aa|down_9|NC_014752.1_683948_686906_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	5	694732-694863	5	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	CTTCGTCATTCCCGTGAAAACGGGAATCTAGAATCTC	37	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|310aa|up_8|NC_014752.1_687246_688176_+,NA|90aa|up_7|NC_014752.1_688366_688636_+,NA|71aa|up_6|NC_014752.1_688719_688932_+,NA|95aa|up_5|NC_014752.1_688968_689253_+,NA|52aa|up_1|NC_014752.1_692580_692736_+,NA|71aa|down_0|NC_014752.1_695000_695213_+,NA|84aa|down_2|NC_014752.1_696025_696277_-,NA|257aa|down_3|NC_014752.1_696376_697147_+	NA|986aa|up_9|NC_014752.1_683948_686906_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|310aa|up_8|NC_014752.1_687246_688176_+	NA	NA|90aa|up_7|NC_014752.1_688366_688636_+	NA	NA|71aa|up_6|NC_014752.1_688719_688932_+	NA	NA|95aa|up_5|NC_014752.1_688968_689253_+	NA	NA|615aa|up_4|NC_014752.1_689260_691105_+	pfam05616, Neisseria_TspB, Neisseria meningitidis TspB protein	NA|93aa|up_3|NC_014752.1_691106_691385_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|398aa|up_2|NC_014752.1_691387_692581_+	pfam05707, Zot, Zonular occludens toxin (Zot)	NA|52aa|up_1|NC_014752.1_692580_692736_+	NA	NA|316aa|up_0|NC_014752.1_693330_694278_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|71aa|down_0|NC_014752.1_695000_695213_+	NA	NA|269aa|down_1|NC_014752.1_695167_695974_-	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold	NA|84aa|down_2|NC_014752.1_696025_696277_-	NA	NA|257aa|down_3|NC_014752.1_696376_697147_+	NA	NA|390aa|down_4|NC_014752.1_697291_698461_+	TIGR01325, O_suc_HS_sulf, O-succinylhomoserine sulfhydrylase	NA|69aa|down_5|NC_014752.1_698555_698762_+	pfam10981, DUF2788, Protein of unknown function (DUF2788)	NA|251aa|down_6|NC_014752.1_698836_699589_-	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase	NA|506aa|down_7|NC_014752.1_699692_701210_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|531aa|down_8|NC_014752.1_701202_702795_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|768aa|down_9|NC_014752.1_702814_705118_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	6	1301728-1301809	6	CRISPRCasFinder	no	WYL	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Unclear	GGATTCCCGCTTTTGCGGGAATGACG	26	0	0	NA	NA	I-E	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|219aa|up_6|NC_014752.1_1292164_1292821_+,NA|278aa|up_5|NC_014752.1_1293086_1293920_+,NA|230aa|up_4|NC_014752.1_1293944_1294634_+,NA|219aa|up_3|NC_014752.1_1297973_1298630_+,NA|145aa|down_4|NC_014752.1_1306084_1306519_-,NA|185aa|down_8|NC_014752.1_1310780_1311335_-,NA|167aa|down_9|NC_014752.1_1311419_1311920_-	NA|112aa|up_9|NC_014752.1_1287365_1287701_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	WYL|298aa|up_8|NC_014752.1_1287911_1288805_+	pfam13280, WYL, WYL domain	NA|1025aa|up_7|NC_014752.1_1288975_1292050_+	COG0433, COG0433,  HerA helicase [Replication, recombination, and repair]	NA|219aa|up_6|NC_014752.1_1292164_1292821_+	NA	NA|278aa|up_5|NC_014752.1_1293086_1293920_+	NA	NA|230aa|up_4|NC_014752.1_1293944_1294634_+	NA	NA|219aa|up_3|NC_014752.1_1297973_1298630_+	NA	NA|96aa|up_2|NC_014752.1_1299252_1299540_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|91aa|up_1|NC_014752.1_1299536_1299809_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|514aa|up_0|NC_014752.1_1300005_1301547_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|452aa|down_0|NC_014752.1_1302254_1303610_-	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|274aa|down_1|NC_014752.1_1303806_1304628_+	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)	NA|158aa|down_2|NC_014752.1_1304696_1305170_-	COG2846, COG2846, Regulator of cell morphogenesis and NO signaling [Cell division and chromosome partitioning]	NA|111aa|down_3|NC_014752.1_1305468_1305801_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|145aa|down_4|NC_014752.1_1306084_1306519_-	NA	NA|160aa|down_5|NC_014752.1_1306865_1307345_-	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|316aa|down_6|NC_014752.1_1307550_1308498_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|463aa|down_7|NC_014752.1_1308825_1310214_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|185aa|down_8|NC_014752.1_1310780_1311335_-	NA	NA|167aa|down_9|NC_014752.1_1311419_1311920_-	NA
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	7	1375560-1375661	7	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	CGGCAGGCTGAAGCCCACCCTGCCATTA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA,NA|216aa|down_7|NC_014752.1_1395225_1395873_+,NA|161aa|down_9|NC_014752.1_1403020_1403503_-	NA|485aa|up_9|NC_014752.1_1365035_1366490_+	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|140aa|up_8|NC_014752.1_1366638_1367058_-	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|80aa|up_7|NC_014752.1_1367054_1367294_-	COG4691, StbC, Plasmid stability protein [General function prediction only]	NA|162aa|up_6|NC_014752.1_1368106_1368592_-	pfam00731, AIRC, AIR carboxylase	NA|239aa|up_5|NC_014752.1_1368640_1369357_-	COG1729, COG1729, Uncharacterized protein conserved in bacteria [Function unknown]	NA|223aa|up_4|NC_014752.1_1369356_1370025_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|62aa|up_3|NC_014752.1_1370035_1370221_-	pfam11943, DUF3460, Protein of unknown function (DUF3460)	NA|659aa|up_2|NC_014752.1_1370364_1372341_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|711aa|up_1|NC_014752.1_1372435_1374568_+	PRK08691, PRK08691, DNA polymerase III subunits gamma and tau; Validated	NA|112aa|up_0|NC_014752.1_1374647_1374983_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|3260aa|down_0|NC_014752.1_1376241_1386021_+	COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]	NA|349aa|down_1|NC_014752.1_1387442_1388489_-	PRK09354, recA, recombinase A; Provisional	NA|266aa|down_2|NC_014752.1_1388712_1389510_+	PRK02412, aroD, type I 3-dehydroquinate dehydratase	NA|672aa|down_3|NC_014752.1_1389529_1391545_+	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep	NA|353aa|down_4|NC_014752.1_1391614_1392673_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|139aa|down_5|NC_014752.1_1393747_1394164_+	pfam13518, HTH_28, Helix-turn-helix domain	NA|204aa|down_6|NC_014752.1_1394339_1394951_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|216aa|down_7|NC_014752.1_1395225_1395873_+	NA	NA|1098aa|down_8|NC_014752.1_1396051_1399345_+	cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases	NA|161aa|down_9|NC_014752.1_1403020_1403503_-	NA
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	8	1672895-1673594	8,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Unclear	GTTTCAACACACAGCCGCCTAGAGGCGGCTGA,GTTTCAACACACAGCCGCCTAGAGGCGGCTGA,GTTTCAACACACAGCCGCCTAGAGGCGGCTGA	32,32,32	0	0	NA	NA	NA:NA:NA	10,10,9	10	Unclear	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|63aa|up_6|NC_014752.1_1663570_1663759_-,NA|47aa|up_2|NC_014752.1_1667512_1667653_-,NA|106aa|down_2|NC_014752.1_1675744_1676062_-,NA|50aa|down_3|NC_014752.1_1676051_1676201_-,NA|161aa|down_9|NC_014752.1_1679688_1680171_-	NA|425aa|up_9|NC_014752.1_1660640_1661915_+	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|361aa|up_8|NC_014752.1_1661927_1663010_+	TIGR02223, Cell_division_protein_FtsN, cell division protein FtsN	NA|166aa|up_7|NC_014752.1_1663002_1663500_+	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only]	NA|63aa|up_6|NC_014752.1_1663570_1663759_-	NA	NA|515aa|up_5|NC_014752.1_1663905_1665450_+	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|up_4|NC_014752.1_1665547_1666039_+	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|209aa|up_3|NC_014752.1_1666097_1666724_+	PRK01222, PRK01222, phosphoribosylanthranilate isomerase	NA|47aa|up_2|NC_014752.1_1667512_1667653_-	NA	NA|946aa|up_1|NC_014752.1_1667658_1670496_-	TIGR01776, Lactoferrin-binding_protein_A, TonB-dependent lactoferrin and transferrin receptors	NA|727aa|up_0|NC_014752.1_1670492_1672673_-	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	cas2|98aa|down_0|NC_014752.1_1673784_1674078_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|NC_014752.1_1674132_1675146_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	NA|106aa|down_2|NC_014752.1_1675744_1676062_-	NA	NA|50aa|down_3|NC_014752.1_1676051_1676201_-	NA	NA|308aa|down_4|NC_014752.1_1676317_1677241_-	PRK00089, era, GTPase Era; Reviewed	NA|240aa|down_5|NC_014752.1_1677287_1678007_-	PRK00102, rnc, ribonuclease III; Reviewed	NA|108aa|down_6|NC_014752.1_1678173_1678497_+	COG4859, COG4859, Uncharacterized protein conserved in bacteria [Function unknown]	NA|159aa|down_7|NC_014752.1_1678543_1679020_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|142aa|down_8|NC_014752.1_1679097_1679523_+	PRK00202, nusB, transcription antitermination factor NusB	NA|161aa|down_9|NC_014752.1_1679688_1680171_-	NA
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	9	1894689-1895318	9,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Type II-A, Type II-B,Type II-B, or Type II-C?,Type II-C	ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC	36,36,36	0	0	NA	NA	NA:NA:NA	9,9,7	9	TypeII-A,TypeII-B,TypeII-B,orTypeII-C?,TypeII-C	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|70aa|up_7|NC_014752.1_1885448_1885658_-,NA|50aa|up_5|NC_014752.1_1885972_1886122_+,NA|54aa|up_4|NC_014752.1_1886189_1886351_-,NA|101aa|down_5|NC_014752.1_1902011_1902314_-,NA|66aa|down_9|NC_014752.1_1907751_1907949_+	NA|431aa|up_9|NC_014752.1_1882872_1884165_+	COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]	NA|279aa|up_8|NC_014752.1_1884216_1885053_-	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|70aa|up_7|NC_014752.1_1885448_1885658_-	NA	NA|79aa|up_6|NC_014752.1_1885635_1885872_-	COG2501, COG2501, S4-like RNA binding protein [Replication, recombination, and repair]	NA|50aa|up_5|NC_014752.1_1885972_1886122_+	NA	NA|54aa|up_4|NC_014752.1_1886189_1886351_-	NA	NA|1145aa|up_3|NC_014752.1_1886363_1889798_+	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	cas9|1083aa|up_2|NC_014752.1_1890077_1893326_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_1|NC_014752.1_1893391_1894306_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|109aa|up_0|NC_014752.1_1894298_1894625_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|311aa|down_0|NC_014752.1_1896068_1897001_-	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|705aa|down_1|NC_014752.1_1897070_1899185_-	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|220aa|down_2|NC_014752.1_1899344_1900004_+	cd07533, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar to Parvibaculum lavamentivorans  HAD-superfamily hydrolase, subfamily IA, variant 1	NA|323aa|down_3|NC_014752.1_1900090_1901059_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|165aa|down_4|NC_014752.1_1901088_1901583_-	PRK00376, lspA, lipoprotein signal peptidase	NA|101aa|down_5|NC_014752.1_1902011_1902314_-	NA	NA|930aa|down_6|NC_014752.1_1902328_1905118_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|307aa|down_7|NC_014752.1_1905260_1906181_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|253aa|down_8|NC_014752.1_1906589_1907348_+	pfam02462, Opacity, Opacity family porin protein	NA|66aa|down_9|NC_014752.1_1907751_1907949_+	NA
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	10	1928418-1928517	10	CRISPRCasFinder	no	DEDDh	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Unclear	TTTTTGCGTTTTTCGGGAGGGGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|104aa|up_1|NC_014752.1_1924059_1924371_-,NA|72aa|down_0|NC_014752.1_1929342_1929558_-,NA|211aa|down_4|NC_014752.1_1933118_1933751_+,NA|86aa|down_9|NC_014752.1_1940401_1940659_+	NA|350aa|up_9|NC_014752.1_1915783_1916833_+	COG3781, COG3781, Predicted membrane protein [Function unknown]	NA|559aa|up_8|NC_014752.1_1916892_1918569_-	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	NA|144aa|up_7|NC_014752.1_1918743_1919175_+	COG2510, COG2510, Predicted membrane protein [Function unknown]	NA|232aa|up_6|NC_014752.1_1919208_1919904_-	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family	NA|167aa|up_5|NC_014752.1_1919920_1920421_-	TIGR02296, HpaC, 4-hydroxyphenylacetate 3-monooxygenase, reductase component	NA|147aa|up_4|NC_014752.1_1920535_1920976_-	TIGR02337, Homoprotocatechuate_degradative_operon_repressor	NA|170aa|up_3|NC_014752.1_1921293_1921803_-	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|360aa|up_2|NC_014752.1_1922168_1923248_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|104aa|up_1|NC_014752.1_1924059_1924371_-	NA	NA|1011aa|up_0|NC_014752.1_1925326_1928359_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|72aa|down_0|NC_014752.1_1929342_1929558_-	NA	NA|377aa|down_1|NC_014752.1_1929827_1930958_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|86aa|down_2|NC_014752.1_1931019_1931277_+	pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange	NA|132aa|down_3|NC_014752.1_1931418_1931814_+	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination,    and repair]	NA|211aa|down_4|NC_014752.1_1933118_1933751_+	NA	NA|1072aa|down_5|NC_014752.1_1933780_1936996_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|300aa|down_6|NC_014752.1_1937218_1938118_-	cd08478, PBP2_CrgA, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA, contains the type 2 periplasmic binding domain	NA|193aa|down_7|NC_014752.1_1938221_1938800_+	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]	NA|347aa|down_8|NC_014752.1_1939244_1940285_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|86aa|down_9|NC_014752.1_1940401_1940659_+	NA
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	11	2057751-2057905	11	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	GGGAATGACGAATTAGAAGTTACTCAAAACTCAAAGAAACCGAAACCG	48	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|52aa|up_2|NC_014752.1_2051458_2051614_+,NA	NA|481aa|up_9|NC_014752.1_2038665_2040108_+	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like	NA|310aa|up_8|NC_014752.1_2040189_2041119_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|629aa|up_7|NC_014752.1_2041287_2043174_+	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|506aa|up_6|NC_014752.1_2043233_2044751_-	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|341aa|up_5|NC_014752.1_2045813_2046836_+	pfam16960, HpuA, Haemoglobin-haptoglobin utilisation, porphyrin transporter	NA|811aa|up_4|NC_014752.1_2046866_2049299_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|449aa|up_3|NC_014752.1_2049979_2051326_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|52aa|up_2|NC_014752.1_2051458_2051614_+	NA	NA|144aa|up_1|NC_014752.1_2051610_2052042_+	COG5346, COG5346, Predicted membrane protein [Function unknown]	NA|1677aa|up_0|NC_014752.1_2052176_2057207_+	pfam02395, Peptidase_S6, Immunoglobulin A1 protease	NA|933aa|down_0|NC_014752.1_2057973_2060772_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|169aa|down_1|NC_014752.1_2060937_2061444_-	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|140aa|down_2|NC_014752.1_2061465_2061885_-	COG4316, COG4316, Uncharacterized protein conserved in bacteria [Function unknown]	NA|108aa|down_3|NC_014752.1_2061917_2062241_-	PRK00446, cyaY, frataxin-like protein; Provisional	NA|57aa|down_4|NC_014752.1_2062311_2062482_+	pfam13627, LPAM_2, Prokaryotic lipoprotein-attachment site	NA|407aa|down_5|NC_014752.1_2062492_2063713_+	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|145aa|down_6|NC_014752.1_2063919_2064354_+	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown]	NA|31aa|down_7|NC_014752.1_2064405_2064498_-	pfam16951, MaAIMP_sms, Putative methionine and alanine importer, small subunit	NA|529aa|down_8|NC_014752.1_2064494_2066081_-	cd10334, SLC6sbd_u1, uncharacterized bacterial and archaeal solute carrier 6 subfamily; solute-binding domain	NA|545aa|down_9|NC_014752.1_2066844_2068479_-	PRK00013, groEL, chaperonin GroEL; Reviewed
GCF_000196295.1_ASM19629v1	NC_014752	Neisseria lactamica 020-06, complete genome	12	2191651-2191755	12	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	Orphan	GAAGGCAAATGCGGCGAGGGCAAATGCGGT	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,DEDDh,cas2,WYL,cas1,cas9,DinG	NA|63aa|up_2|NC_014752.1_2189984_2190173_-,NA|147aa|down_4|NC_014752.1_2194605_2195046_+,NA|172aa|down_5|NC_014752.1_2195212_2195728_-	NA|487aa|up_9|NC_014752.1_2175033_2176494_-	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|410aa|up_8|NC_014752.1_2176605_2177835_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|609aa|up_7|NC_014752.1_2178264_2180091_+	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|1390aa|up_6|NC_014752.1_2180145_2184315_+	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|486aa|up_5|NC_014752.1_2185513_2186971_+	TIGR00924, putative_Di/Tri_peptide_transporter, amino acid/peptide transporter (Peptide:H+ symporter), bacterial	NA|368aa|up_4|NC_014752.1_2187871_2188975_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|298aa|up_3|NC_014752.1_2189077_2189971_-	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|63aa|up_2|NC_014752.1_2189984_2190173_-	NA	NA|163aa|up_1|NC_014752.1_2190185_2190674_-	pfam15428, Imm26, Immunity protein 26	NA|150aa|up_0|NC_014752.1_2190947_2191397_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|281aa|down_0|NC_014752.1_2191896_2192739_+	COG3220, COG3220, Uncharacterized protein conserved in bacteria [Function unknown]	NA|249aa|down_1|NC_014752.1_2192728_2193475_+	COG3219, COG3219, Uncharacterized protein conserved in bacteria [Function unknown]	NA|196aa|down_2|NC_014752.1_2193496_2194084_+	PRK12532, PRK12532, RNA polymerase sigma factor; Provisional	NA|60aa|down_3|NC_014752.1_2194090_2194270_+	pfam13490, zf-HC2, Putative zinc-finger	NA|147aa|down_4|NC_014752.1_2194605_2195046_+	NA	NA|172aa|down_5|NC_014752.1_2195212_2195728_-	NA	NA|190aa|down_6|NC_014752.1_2195742_2196312_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|424aa|down_7|NC_014752.1_2196376_2197648_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|98aa|down_8|NC_014752.1_2197806_2198100_+	pfam14131, DUF4298, Domain of unknown function (DUF4298)	NA|204aa|down_9|NC_014752.1_2198176_2198788_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]
