The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_004551	Tropheryma whipplei TW08/27, complete genome	925938	28310	35108	925938		Escherichia_phage(33.33%)	8	NA	NA
WP_011096002.1|28310_28853_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.0	3.7e-23
WP_011102305.1|29077_29500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011096004.1|29803_30667_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	37.5	3.8e-30
WP_011096005.1|30663_31647_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	44.7	1.2e-75
WP_011096006.1|31891_32515_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	32.4	1.8e-13
WP_011096007.1|32570_33449_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	57.2	2.5e-90
WP_011096008.1|33456_34305_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_011096009.1|34301_35108_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	25.9	1.9e-12
>prophage 2
NC_004551	Tropheryma whipplei TW08/27, complete genome	925938	213481	222749	925938	protease	Hokovirus(14.29%)	9	NA	NA
WP_011096132.1|213481_213985_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	28.6	9.6e-10
WP_011096133.1|213987_215988_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5ESM9	Bathycoccus_sp._RCC1105_virus	45.9	4.9e-105
WP_011096134.1|216001_216547_+	GTP cyclohydrolase I	NA	A0A1W7AF02	Streptococcus_virus	37.3	5.5e-19
WP_011096135.1|216583_218881_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	31.8	1.9e-20
WP_011096136.1|218877_219327_+	DUF3180 domain-containing protein	NA	NA	NA	NA	NA
WP_080556894.1|219485_220313_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.7	3.8e-19
WP_080556895.1|220221_221079_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011096139.1|221085_221778_+	uracil-DNA glycosylase	NA	U5U481	Elephant_endotheliotropic_herpesvirus	38.9	7.0e-35
WP_011096140.1|221810_222749_+	riboflavin biosynthesis protein RibF	NA	A0A1V0SD03	Indivirus	35.4	1.3e-07
