assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000196055.1_ASM19605v1	NC_004368	Streptococcus agalactiae NEM316, complete genome	1	951908-952801	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,WYL,csa3	Type II-A,Type II-B,Type II-C	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGNTGTTTCGAATGGTTCCAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	13,13,13	13	TypeII-A,TypeII-B,TypeII-C	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,WYL,csa3	NA,NA|87aa|down_0|NC_004368.1_952853_953114_+	NA|124aa|up_9|NC_004368.1_941267_941639_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NC_004368.1_941663_942044_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NC_004368.1_942135_943266_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NC_004368.1_943269_944007_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NC_004368.1_944007_944778_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NC_004368.1_944767_945424_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1378aa|up_3|NC_004368.1_945812_949946_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|290aa|up_2|NC_004368.1_949947_950817_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NC_004368.1_950813_951155_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NC_004368.1_951141_951807_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|87aa|down_0|NC_004368.1_952853_953114_+	NA	NA|139aa|down_1|NC_004368.1_953423_953840_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_2|NC_004368.1_953975_955808_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|878aa|down_3|NC_004368.1_956053_958687_+	NF033189, internalin_A, class 1 internalin InlA	NA|220aa|down_4|NC_004368.1_958786_959446_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_5|NC_004368.1_959454_959919_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|145aa|down_6|NC_004368.1_959918_960353_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_7|NC_004368.1_960504_963297_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_8|NC_004368.1_963296_964400_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|194aa|down_9|NC_004368.1_964520_965102_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others
GCF_000196055.1_ASM19605v1	NC_004368	Streptococcus agalactiae NEM316, complete genome	2	1191273-1191348	2	CRISPRCasFinder	no		cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,WYL,csa3	Orphan	AGCAACTGATACTTGTTTAACATCA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,WYL,csa3	NA|153aa|up_7|NC_004368.1_1184215_1184674_-,NA|76aa|up_6|NC_004368.1_1184734_1184962_-,NA|166aa|up_5|NC_004368.1_1185205_1185703_-,NA|251aa|up_4|NC_004368.1_1185716_1186469_-,NA|162aa|up_3|NC_004368.1_1186517_1187003_-,NA|76aa|up_2|NC_004368.1_1187108_1187336_-,NA|100aa|down_0|NC_004368.1_1193448_1193748_-,NA|62aa|down_2|NC_004368.1_1194324_1194510_-,NA|55aa|down_4|NC_004368.1_1195538_1195703_-,NA|148aa|down_5|NC_004368.1_1195809_1196253_-,NA|124aa|down_7|NC_004368.1_1196959_1197331_-	NA|784aa|up_9|NC_004368.1_1181462_1183814_-	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC	NA|120aa|up_8|NC_004368.1_1183794_1184154_-	pfam12666, PrgI, PrgI family protein	NA|153aa|up_7|NC_004368.1_1184215_1184674_-	NA	NA|76aa|up_6|NC_004368.1_1184734_1184962_-	NA	NA|166aa|up_5|NC_004368.1_1185205_1185703_-	NA	NA|251aa|up_4|NC_004368.1_1185716_1186469_-	NA	NA|162aa|up_3|NC_004368.1_1186517_1187003_-	NA	NA|76aa|up_2|NC_004368.1_1187108_1187336_-	NA	NA|933aa|up_1|NC_004368.1_1187610_1190409_-	pfam18220, BspA_v, Adhesin BspA variable domain	NA|237aa|up_0|NC_004368.1_1190475_1191186_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|100aa|down_0|NC_004368.1_1193448_1193748_-	NA	NA|66aa|down_1|NC_004368.1_1194130_1194328_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|62aa|down_2|NC_004368.1_1194324_1194510_-	NA	NA|342aa|down_3|NC_004368.1_1194511_1195537_-	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus	NA|55aa|down_4|NC_004368.1_1195538_1195703_-	NA	NA|148aa|down_5|NC_004368.1_1195809_1196253_-	NA	NA|86aa|down_6|NC_004368.1_1196518_1196776_-	pfam12961, DUF3850, Domain of Unknown Function with PDB structure (DUF3850)	NA|124aa|down_7|NC_004368.1_1196959_1197331_-	NA	NA|328aa|down_8|NC_004368.1_1197444_1198428_-	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional	NA|447aa|down_9|NC_004368.1_1198630_1199971_-	cd17503, MFS_LmrB_MDR_like, Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
