The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_004368	Streptococcus agalactiae NEM316, complete genome	2211485	36655	48720	2211485		Synechococcus_phage(28.57%)	8	NA	NA
WP_001042250.1|36655_40381_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	1.9e-38
WP_000220676.1|40614_42069_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
WP_001291328.1|42096_43119_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.7	1.1e-63
WP_000685109.1|43286_43835_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.4e-25
WP_000780022.1|43857_44610_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000166549.1|44629_46177_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.2	3.9e-78
WP_001045908.1|46369_47269_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783419.1|47415_48720_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	3.7e-05
>prophage 2
NC_004368	Streptococcus agalactiae NEM316, complete genome	2211485	610215	617769	2211485	transposase,integrase	Streptococcus_phage(50.0%)	11	603560:603575	621049:621064
603560:603575	attL	GAAAATAAATAAAATT	NA	NA	NA	NA
WP_000595708.1|610215_611412_+	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	54.5	4.6e-103
WP_001068667.1|611991_612339_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_071659971.1|612483_613098_-|integrase	site-specific integrase	integrase	F8HGP4	Streptococcus_phage	60.7	9.2e-55
WP_001872365.1|613100_613367_-	hypothetical protein	NA	Q77YW7	Streptococcus_phage	65.2	9.2e-20
WP_000640620.1|613366_613771_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001122304.1|613932_614133_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_001865698.1|614154_614415_+|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.0	3.4e-11
WP_001867107.1|614540_614750_+|transposase	transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
WP_000508795.1|614922_615084_-	NINE protein	NA	NA	NA	NA	NA
WP_000594360.1|615825_617103_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000353149.1|617112_617769_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
621049:621064	attR	GAAAATAAATAAAATT	NA	NA	NA	NA
>prophage 3
NC_004368	Streptococcus agalactiae NEM316, complete genome	2211485	1680451	1691184	2211485		Streptococcus_phage(84.62%)	14	NA	NA
WP_000767486.1|1680451_1681279_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.0	1.1e-124
WP_000287943.1|1681319_1681676_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
WP_000966769.1|1681677_1682154_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	1.6e-38
WP_000232154.1|1682209_1683391_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	9.1e-168
WP_001198082.1|1683452_1684001_-	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	57.9	1.4e-54
WP_000158397.1|1684069_1685161_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	78.0	3.9e-165
WP_000603271.1|1685293_1685929_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000425866.1|1686198_1687068_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	4.1e-109
WP_000358198.1|1687067_1687394_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000364568.1|1687424_1688288_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	50.0	2.5e-74
WP_000715592.1|1688307_1688943_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
WP_001144242.1|1689031_1689691_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	56.5	8.0e-65
WP_000178150.1|1689709_1690420_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
WP_001185985.1|1690419_1691184_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
>prophage 4
NC_004368	Streptococcus agalactiae NEM316, complete genome	2211485	2180929	2188133	2211485		uncultured_Caudovirales_phage(16.67%)	8	NA	NA
WP_001042655.1|2180929_2181634_-	transglycosylase SLT domain-containing protein	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	4.2e-27
WP_000029066.1|2181739_2182279_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	42.2	5.8e-21
WP_000359358.1|2182494_2183289_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000510606.1|2183281_2184124_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000181757.1|2184099_2184939_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
WP_000976003.1|2184938_2185481_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000217754.1|2185603_2186887_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	2.2e-05
WP_000706188.1|2186888_2188133_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.3	3.7e-87
