bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694110	Marine virus AFVG_250M1083, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	17761-17790	CTGTGCATCGATAGTAATGTTTCCACTTGT	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694108	Marine virus AFVG_250M1116, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	14969-14998	CTGTGCATCGATAGTAATGTTTCCACTTGT	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694734	Marine virus AFVG_250M466, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	16455-16484	CTGTGCATCGATAGTAATGTTTCCACTTGT	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN693696	Marine virus AFVG_250M1082, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	21804-21833	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694066	Marine virus AFVG_250M1081, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	21777-21806	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN693882	Marine virus AFVG_250M174, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	21999-22028	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN693875	Marine virus AFVG_250M965, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	22022-22051	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694418	Marine virus AFVG_250M966, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	22210-22239	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN693674	Marine virus AFVG_250M120, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	23016-23045	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694481	Marine virus AFVG_250M175, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	21973-22002	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694272	Marine virus AFVG_250M1166, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	23150-23179	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.1|2769028|30|NC_003212|CRISPRCasFinder,CRT	MN694004	Marine virus AFVG_250M467, complete genome	TATTGCATAGATACTAATGTTTCCACTTGT	22132-22161	ACAAGTGGAAACATTACTATCGATGCACAG	2	0.9	5
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	FW590635	JP 2010534058-A/45: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME	AACATGAACAGAGATTCAGCATCGTTGCTA	563-592	TAGCAACGATGCTGAATCTCTATTCATGTT	1	1.0	1
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_003216	Listeria phage A118, complete genome	AACATGAACAGAGATTCAGCATCGTTGCTA	24073-24102	TAGCAACGATGCTGAATCTCTATTCATGTT	1	1.0	1
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	AJ242593	Bacteriophage A118 complete genome	AACATGAACAGAGATTCAGCATCGTTGCTA	24073-24102	TAGCAACGATGCTGAATCTCTATTCATGTT	1	1.0	1
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	HI504206	Sequence 48 from Patent EP2147092	AACATGAACAGAGATTCAGCATCGTTGCTA	563-592	TAGCAACGATGCTGAATCTCTATTCATGTT	1	1.0	1
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	FW590615	JP 2010534058-A/25: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME	AACATGAACAGAGATTCAGCATCGTTGCTA	1046-1075	AATATGAATAGAGATTCAGCATCGTTGCTA	2	1.0	2
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	HI504184	Sequence 26 from Patent EP2147092	AACATGAACAGAGATTCAGCATCGTTGCTA	1046-1075	AATATGAATAGAGATTCAGCATCGTTGCTA	2	1.0	2
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	AJ417489	bacteriophage U153 int gene for U153 integrase	AACATGAACAGAGATTCAGCATCGTTGCTA	1046-1075	AATATGAATAGAGATTCAGCATCGTTGCTA	2	1.0	2
NC_003212	3.2|2769094|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MH341451	Listeria phage PSU-VKH-LP019, complete genome	AACATGAACAGAGATTCAGCATCGTTGCTA	23179-23208	TAGCAACGATGCTGAATCTCTATTCATATT	2	1.0	2
NC_003212	3.3|2769160|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP028100	Synechocystis sp. IPPAS B-1465 plasmid pSYSX, complete sequence	TTGTATTATTTTGGTGATTGCCTTTCTGTA	12833-12862	GAGTATTATTTTAGTGATTTCCTTTCTAAA	2	0.8333333333333334	6
NC_003212	3.3|2769160|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP028100	Synechocystis sp. IPPAS B-1465 plasmid pSYSX, complete sequence	TTGTATTATTTTGGTGATTGCCTTTCTGTA	66820-66849	GAGTATTATTTTAGTGATTTCCTTTCTAAA	2	0.8333333333333334	6
NC_003212	3.3|2769160|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_005232	Synechocystis sp. PCC 6803 plasmid pSYSX, complete sequence	TTGTATTATTTTGGTGATTGCCTTTCTGTA	12833-12862	GAGTATTATTTTAGTGATTTCCTTTCTAAA	2	0.8333333333333334	6
NC_003212	3.3|2769160|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_005232	Synechocystis sp. PCC 6803 plasmid pSYSX, complete sequence	TTGTATTATTTTGGTGATTGCCTTTCTGTA	67551-67580	GAGTATTATTTTAGTGATTTCCTTTCTAAA	2	0.8333333333333334	6
NC_003212	3.3|2769160|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	JF974301	Vibrio phage VD1, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces	TTGTATTATTTTGGTGATTGCCTTTCTGTA	43878-43907	CTATGAGATTTTGGTAATTGCCTTTCTTTA	2	0.7666666666666667	7
NC_003212	3.4|2769226|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MH341453	Listeria phage PSU-VKH-LP041, complete genome	TTTTCCGAGCGCTGCATCTTTTATACTGTT	15243-15272	AACAGTATAAAAGATGCAGCGCTCGGAAAA	0	1.0	0
NC_003212	3.4|2769226|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_009813	Listeria phage B054, complete genome	TTTTCCGAGCGCTGCATCTTTTATACTGTT	15243-15272	AACAGTATAAAAGATGCAGCGCTCGGAAAA	0	1.0	0
NC_003212	3.4|2769226|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP023158	Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed3, complete sequence	TTTTCCGAGCGCTGCATCTTTTATACTGTT	6226-6255	GCGCAGATGAAAGCTGCAGCGCTCGGAAAA	2	0.8	5
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	DQ003637	Listeria phage A500, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	28174-28203	AATGGATTGAGGAACAACAAGAGAAGCAAG	1	1.0	1
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KP399677	Listeria phage vB_LmoS_188, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	27826-27855	AATGGATTGAGGAACAACAAGAGAAGCAAG	1	1.0	1
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KP399678	Listeria phage vB_LmoS_293, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	29195-29224	AATGGATAGAGGAACAACAAGAAAAGCAAG	1	1.0	1
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MH341452	Listeria phage PSU-VKH-LP040, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	28569-28598	AATGGATTGAGGAGCAACAAGAGAAGCAAG	2	1.0	2
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KJ094022	Listeria phage LP-030-3, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	37558-37587	AATGGATTGAGGAGCAACAAGAGAAGCAAG	2	1.0	2
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_003216	Listeria phage A118, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	30130-30159	AGTGGATTGAGGAGCAACAAGAGAAGCAAG	2	0.9333333333333333	3
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	AJ242593	Bacteriophage A118 complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	30130-30159	AGTGGATTGAGGAGCAACAAGAGAAGCAAG	2	0.9333333333333333	3
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KY653129	Staphylococcus phage IME1365_01, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	3857-3886	TTTGGATAGAGGAACAAAAAGAGAAACAAC	2	0.9	5
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KU598975	Staphylococcus phage CNPx, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	31596-31625	TTTGGATAGAGGAACAAAAAGAGAAACAAC	2	0.9	5
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_008723	Staphylococcus phage PH15, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	32813-32842	TTTGGATAGAGGAACAAAAAGAGAAACAAC	2	0.9	5
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP050184	Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	313930-313959	AGAGTATAGAGGAACCACAAGAGAAGTTAC	1	0.7	7
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MG969427	Anoxybacillus phage A403, complete genome	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	34808-34837	AACCAAAAGAGAAACAACAAGAAAAGCAAG	2	0.7666666666666667	6
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	AP013754	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C20-MedDCM-OCT-S24-C67, *** SEQUENCING IN PROGRESS ***	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	20651-20680	AGGCAAAAGAGGAAAAACAAGAGACGCAAG	2	0.7666666666666667	7
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	80854-80883	GTAACTTCTCTTGTGGTTCCTCTATACTCT	1	0.7	7
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	281565-281594	GTAACTTCTCTTGTGGTTCCTCTATACTCT	1	0.7	7
NC_003212	3.5|2769292|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	CTTGCTTCTCTTGTTGTTCCTCTATCCATT	455154-455183	GTAACTTCTCTTGTGGTTCCTCTATACTCT	1	0.7	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	40478-40507	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP037735	Citrobacter freundii strain CAV1857 plasmid pCAV1857-208, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	133654-133683	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	CP045556	Citrobacter sp. S39 plasmid pS39-1, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	186583-186612	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP045203	Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	75600-75629	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP022152	Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	216595-216624	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP030224	Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	168427-168456	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP041248	Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	228081-228110	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP011611	Citrobacter freundii strain CAV1321 plasmid pKPC_CAV1321-244, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	168736-168765	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	CP052139	Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	219857-219886	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_MG387191	Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	190725-190754	GGGTATTATGGGTTTGCGACTGGTGATGAA	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP011133	Citrobacter amalonaticus Y19 plasmid unnamed, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	47013-47042	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP042535	Citrobacter freundii strain E51 plasmid pE51_001, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	25186-25215	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP026058	Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	168485-168514	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP029436	Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	203185-203214	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP029431	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	323840-323869	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP018017	Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	48936-48965	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.6|2769358|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP029442	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence	ATTTATTATGAGTTTGGGACTGGTGAGAAA	295039-295068	TTCATCACCAGTCGCAAACCCATAATACCC	2	0.7666666666666667	7
NC_003212	3.7|2769424|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KP211958	Cyanophage P-TIM40, complete genome	TATAATGAGTTAGATGGCATTATATGCGAC	6044-6073	TCCCAATATAATGTCATCTAACTCACTACG	2	0.7666666666666667	8
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	TCGACGATTTAACAGATTTTACAGATGCTT	581264-581293	AAGCATGTGTAAAATCTGTTAAAAAACGTT	1	0.7666666666666667	5
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	TCGACGATTTAACAGATTTTACAGATGCTT	47470-47499	TTCGTGATTTAACAGAGTTTACAAATGCTG	2	0.8	7
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	CP002510	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence	TCGACGATTTAACAGATTTTACAGATGCTT	90796-90825	CAGCATTTGTAAACTCTGTTAAATCACGAA	2	0.8	7
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MN694515	Marine virus AFVG_250M511, complete genome	TCGACGATTTAACAGATTTTACAGATGCTT	25319-25348	AAGAATATTTAACGGATTTTAGAGATGCTA	2	0.7666666666666667	7
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	TCGACGATTTAACAGATTTTACAGATGCTT	537557-537586	AAGCATGTGTAAAATCTATTAAAAAACGTT	2	0.7666666666666667	6
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	TCGACGATTTAACAGATTTTACAGATGCTT	302971-303000	AAGCATGTGTAAAATCTATTAAAAAACGTT	2	0.7666666666666667	6
NC_003212	3.8|2769490|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	TCGACGATTTAACAGATTTTACAGATGCTT	303011-303040	AAGCATGTGTAAAATCTATTAAAAAACGTT	2	0.7666666666666667	6
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	ATAATGCAGTAAATAAAGAAATACTTTGCA	187207-187236	AAAAAAGTATGTCATTATTTACTGCATTAT	2	0.9	5
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MN480762	Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence	ATAATGCAGTAAATAAAGAAATACTTTGCA	136518-136547	ATAATGCAGTAAATAATGACATACTTTTTT	2	0.9	5
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	MN480763	Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence	ATAATGCAGTAAATAAAGAAATACTTTGCA	20179-20208	AAAAAAGTATGTCATTATTTACTGCATTAT	2	0.9	5
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_014534	Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence	ATAATGCAGTAAATAAAGAAATACTTTGCA	242366-242395	TGAATGCAGTAAATAAATAAATTCTCAAAA	2	0.7666666666666667	8
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	ATAATGCAGTAAATAAAGAAATACTTTGCA	840996-841025	TTTTGAGAATTTATTTATTTACTGCATTCA	2	0.7666666666666667	8
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	NZ_CP053316	Bacillus circulans strain GN03 plasmid unnamed, complete sequence	ATAATGCAGTAAATAAAGAAATACTTTGCA	808-837	TTTCTTTTATTTGTTTATTAACTGCATTAT	2	0.7666666666666667	8
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	LC492751	Staphylococcus phage KSAP7 genomic DNA, compelete genome	ATAATGCAGTAAATAAAGAAATACTTTGCA	75474-75503	GTAAAGCATTAAATAAAGAAATACCACAAC	2	0.7666666666666667	9
NC_003212	3.9|2769556|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	LC492752	Staphylococcus phage KSAP11 genomic DNA, compelete genome	ATAATGCAGTAAATAAAGAAATACTTTGCA	75294-75323	GTAAAGCATTAAATAAAGAAATACCACAAC	2	0.7666666666666667	9
NC_003212	3.10|2769622|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	KX196154	Shewanella phage SFCi1, complete genome	TATCCTAGGCAAAGTTACCAAAGCGCTACG	11770-11799	CTTAAAAGGCAAAGTTACCAAAGCGCTGCG	1	0.8	6
NC_003212	3.10|2769622|30|NC_003212|CRISPRCasFinder,CRT,PILER-CR	LR743530	Xanthomonas phage Suba genome assembly, chromosome: 1	TATCCTAGGCAAAGTTACCAAAGCGCTACG	14341-14370	ACCCTGATTCAAACTTACCAAAGCGCTACG	1	0.7	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NC_014496	Listeria grayi plasmid pLGUG1, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	46849-46876	GAAAAAATAAAAAACCAATCGTATTCGA	0	1.0	0
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP014251	Listeria monocytogenes strain CFSAN010068 plasmid pCFSAN010068_01, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	33671-33698	TCGAATACGATTGGTTTTTTATTTTTTC	0	1.0	0
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NC_003383	Listeria innocua Clip11262 plasmid pLI100, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	76945-76972	TCGAATACGATTGGTTTTTTATTTTTTC	0	1.0	0
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP014253	Listeria monocytogenes strain CFSAN023459 plasmid CFSAN023459_01, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	2166-2193	TCGAATACGATTGGTTTTTTATTTTTTC	0	1.0	0
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP014254	Listeria monocytogenes strain CFSAN023459 plasmid CFSAN023459_02, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	48614-48641	TCGAATACGATTGGTTTTTTATTTTTTC	0	1.0	0
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	MH277333	UNVERIFIED: Listeria monocytogenes strain nh1 plasmid, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	35594-35621	TCGAATACGATTGGTTTTTTATTTTTTC	0	1.0	0
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP022021	Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	69188-69215	GAAAAAATAAAAAACCAAGCGTATTCGA	1	1.0	1
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP041212	Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	60429-60456	TCGAATACGCTTGGTTTTTTATTTTTTC	1	1.0	1
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NC_022045	Listeria monocytogenes strain N1-011A plasmid, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	80023-80050	TCGAATACGCTTGGTTTTTTATTTTTTC	1	1.0	1
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_MH382833	Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	15276-15303	TCGAATACGCTTGGTTTTTTATTTTTTC	1	1.0	1
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP020834	Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	39426-39453	TCGAATACGCTTGGTTTTTTATTTTTTC	1	1.0	1
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013917	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S38-C100, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	19310-19337	AAAAAAATAAAAAACCAATCGTTATTAG	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013911	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S26-C111, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	19310-19337	AAAAAAATAAAAAACCAATCGTTATTAG	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013915	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S33-C106, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	19310-19337	AAAAAAATAAAAAACCAATCGTTATTAG	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013916	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S36-C111, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	19316-19343	AAAAAAATAAAAAACCAATCGTTATTAG	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013914	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S32-C111, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	20480-20507	AAAAAAATAAAAAACCAATCGTTATTAG	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013912	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S27-C97, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	20477-20504	AAAAAAATAAAAAACCAATCGTTATTAG	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013927	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S45-C110, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	1864-1891	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013563	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C1E-MedDCM-OCT-S31-C3, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces	TCGAATACGATTGGTTTTTTATTTTTTC	15535-15562	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013910	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S24-C93, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	1854-1881	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013922	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S41-C271, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	1854-1881	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013924	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S42-C110, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	2314-2341	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013920	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S40-C105, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	1864-1891	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	AP013925	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1E-MedDCM-OCT-S43-C124, *** SEQUENCING IN PROGRESS ***	TCGAATACGATTGGTTTTTTATTTTTTC	1864-1891	CTAATAACGATTGGTTTTTTATTTTTTT	0	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	482281-482308	GAAAGAATAAAAAAACAATCGTATATAA	2	0.8571428571428571	5
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	KY421186	Flavobacterium phage FL-1, complete genome	TCGAATACGATTGGTTTTTTATTTTTTC	46709-46736	AAAAATACCATTGGTTTTTTATTTTGAT	1	0.7857142857142857	7
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	MK773491	Salmonella phage 7t3, complete genome	TCGAATACGATTGGTTTTTTATTTTTTC	254592-254619	TGTAAAATAAAAAACCAATCATATAAAA	1	0.75	7
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	MN693047	Marine virus AFVG_25M111, complete genome	TCGAATACGATTGGTTTTTTATTTTTTC	30020-30047	AAAAAGATAAAAAACCAATCGTTTCTAA	1	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	MN693506	Marine virus AFVG_25M112, complete genome	TCGAATACGATTGGTTTTTTATTTTTTC	29781-29808	AAAAAGATAAAAAACCAATCGTTTCTAA	1	0.75	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NZ_CP032461	Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	24147-24174	ACGAAAACGATTGGTTTTTTAGTTAATG	2	0.8214285714285714	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	TCGAATACGATTGGTTTTTTATTTTTTC	39121-39148	TAATATATGATTGGTTTTTTATCTTTTG	2	0.8214285714285714	6
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	MT001829	Salmonella phage SE_PL, complete genome	TCGAATACGATTGGTTTTTTATTTTTTC	94146-94173	TTTTATATGATTGGTTTTTTATTTTACA	1	0.75	7
NC_003383	1.1|76945|28|NC_003383|CRISPRCasFinder	MN693446	Marine virus AFVG_25M550, complete genome	TCGAATACGATTGGTTTTTTATTTTTTC	9689-9716	TTAGACACGATTGGTTTTTTATGTTTTT	1	0.75	6
