The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017450	Francisella cf. novicida Fx1, complete genome	1913619	95863	105322	1913619	tRNA	Staphylococcus_phage(42.86%)	9	NA	NA
WP_014549197.1|95863_97648_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	42.6	4.2e-23
WP_080558888.1|97595_98741_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_080558889.1|98760_99753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080558890.1|99836_100361_-	peptide deformylase	NA	A0A067XQZ3	Caulobacter_phage	37.5	1.2e-15
WP_014549201.1|100357_100801_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	46.4	2.2e-26
WP_014549202.1|100810_102022_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	44.3	6.2e-87
WP_003022624.1|102014_102620_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	35.1	2.7e-27
WP_014549203.1|102612_103680_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	1.8e-50
WP_014549204.1|104071_105322_+	sodium:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	34.3	1.6e-29
>prophage 2
NC_017450	Francisella cf. novicida Fx1, complete genome	1913619	385947	395446	1913619		Enterococcus_phage(16.67%)	9	NA	NA
WP_014549389.1|385947_386796_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.8	1.1e-29
WP_003033096.1|386958_387249_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_014549390.1|387365_388409_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	36.6	5.4e-55
WP_014549391.1|388408_390721_+	phosphoribosylamine--glycine ligase	NA	A0A0M4JBD3	Mollivirus	30.4	1.2e-25
WP_014549392.1|390724_391300_+	phosphoribosylglycinamide formyltransferase	NA	Q58MV3	Prochlorococcus_phage	34.7	1.7e-18
WP_014549393.1|391416_391908_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	40.1	5.9e-20
WP_014549394.1|391911_393009_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_003026519.1|393005_393359_-	YraN family protein	NA	NA	NA	NA	NA
WP_014549395.1|393439_395446_-	M3 family metallopeptidase	NA	A0A1V0SID3	Klosneuvirus	25.9	2.4e-51
>prophage 3
NC_017450	Francisella cf. novicida Fx1, complete genome	1913619	1031627	1039947	1913619		Alteromonas_phage(16.67%)	8	NA	NA
WP_014549835.1|1031627_1033400_+	ribonucleoside-diphosphate reductase subunit alpha	NA	R4W390	Alteromonas_phage	57.4	5.2e-183
WP_003018894.1|1033403_1033664_+	glutaredoxin	NA	A0A2L0UZP1	Agrobacterium_phage	42.7	6.9e-12
WP_003033975.1|1033670_1034903_+	ribonucleotide-diphosphate reductase subunit beta	NA	Q678G9	Lymphocystis_disease_virus	53.6	6.9e-102
WP_014549836.1|1034899_1036792_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	33.4	9.1e-69
WP_014549837.1|1036904_1037507_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_014549838.1|1037503_1038556_+	DNA polymerase IV	NA	F1C5A5	Cronobacter_phage	22.3	1.3e-08
WP_014549839.1|1038895_1039480_-	DUF4145 domain-containing protein	NA	NA	NA	NA	NA
WP_014549840.1|1039737_1039947_-	hypothetical protein	NA	Q9JMN3	Wolbachia_phage	45.8	6.6e-05
>prophage 4
NC_017450	Francisella cf. novicida Fx1, complete genome	1913619	1051054	1114628	1913619	protease,tRNA,transposase	Tupanvirus(18.18%)	60	NA	NA
WP_003015772.1|1051054_1051606_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_014549847.1|1051613_1052981_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	29.5	2.1e-46
WP_003034008.1|1055872_1057288_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA	NA
WP_014549852.1|1057291_1058140_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_014549853.1|1058149_1058995_+	DsbC family protein	NA	NA	NA	NA	NA
WP_003036663.1|1059003_1059888_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	35.0	7.0e-40
WP_014549854.1|1059880_1060456_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_014549855.1|1060474_1061566_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_003036665.1|1061580_1061859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014549856.1|1061895_1063155_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
WP_003018840.1|1063250_1063541_-	50S ribosomal protein L25	NA	NA	NA	NA	NA
WP_003015739.1|1063640_1064609_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.3	9.1e-41
WP_003039457.1|1064819_1065827_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003036670.1|1065819_1067103_+	MFS transporter	NA	NA	NA	NA	NA
WP_003036671.1|1067109_1068396_-	MFS transporter	NA	NA	NA	NA	NA
WP_014549859.1|1068688_1069522_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_014549860.1|1069505_1070675_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_014549861.1|1070772_1071405_-	nicotinamide mononucleotide transporter	NA	A0A2I7SAC7	Vibrio_phage	23.3	1.1e-07
WP_014549862.1|1071404_1071908_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_003036682.1|1072013_1072517_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_003018833.1|1072644_1073226_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_014549865.1|1073316_1074015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014549866.1|1074029_1075166_+	histidine decarboxylase	NA	NA	NA	NA	NA
WP_003034054.1|1075152_1075965_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003034056.1|1076129_1076591_+	hypothetical protein	NA	M4QRU0	Micromonas_pusilla_virus	39.9	2.6e-22
WP_003015717.1|1076626_1076923_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003036691.1|1076944_1077532_-	membrane protein	NA	NA	NA	NA	NA
WP_003039499.1|1077580_1078996_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_076730795.1|1079021_1079675_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_014549867.1|1079684_1080878_-	MFS transporter	NA	NA	NA	NA	NA
WP_003026245.1|1080959_1081475_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003034072.1|1081571_1082318_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_014549868.1|1082333_1082993_-	isoprenoid biosynthesis glyoxalase ElbB	NA	NA	NA	NA	NA
WP_003018819.1|1083022_1084006_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_003034079.1|1084212_1084713_+	ferritin	NA	NA	NA	NA	NA
WP_043024554.1|1086358_1087003_+	glutaredoxin 2	NA	NA	NA	NA	NA
WP_003036701.1|1087004_1087634_+	RnfABCDGE type electron transport complex subunit B	NA	NA	NA	NA	NA
WP_014549873.1|1087626_1088265_+	endonuclease III	NA	NA	NA	NA	NA
WP_003020393.1|1088261_1088693_+	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003039524.1|1088692_1089952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003018803.1|1090067_1090754_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	42.3	4.6e-31
WP_014549874.1|1090798_1094224_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_014549875.1|1094346_1095390_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003015556.1|1095417_1095735_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_014549876.1|1095739_1097437_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.4	1.0e-58
WP_014549877.1|1097628_1098279_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_014549878.1|1098302_1099985_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003034109.1|1100009_1101806_-	threonine synthase	NA	NA	NA	NA	NA
WP_003015672.1|1101948_1102542_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_014549880.1|1102538_1103024_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_003018795.1|1103024_1103951_-|protease	protease modulator HflC	protease	A0A2K9KZA2	Tupanvirus	21.9	7.5e-08
WP_003018791.1|1103952_1105020_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_014549881.1|1105204_1106383_+	FAD-binding domain	NA	NA	NA	NA	NA
WP_003036725.1|1106393_1107701_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003015654.1|1107753_1108083_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_003036727.1|1108193_1109120_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_014549882.1|1109120_1110554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003034128.1|1110666_1110939_-	HU family DNA-binding protein	NA	Q6QIE5	Burkholderia_phage	58.9	6.5e-21
WP_014549883.1|1111025_1113350_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	47.2	6.1e-192
WP_003036795.1|1113374_1114628_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.4	1.1e-126
