The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017470	Lactobacillus amylovorus GRL1118, complete sequence	1894401	1236994	1246662	1894401		Streptococcus_phage(50.0%)	7	NA	NA
WP_014565929.1|1236994_1237906_+	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	57.2	6.3e-92
WP_014565932.1|1239321_1239768_-	GNAT family N-acetyltransferase	NA	A0A1X9I687	Streptococcus_phage	34.6	1.3e-13
WP_013438124.1|1239861_1240389_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	39.7	4.2e-24
WP_014565933.1|1240493_1242767_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	36.3	1.1e-76
WP_014565934.1|1242877_1243567_-	class A sortase	NA	NA	NA	NA	NA
WP_013438127.1|1243569_1245408_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.6	3.1e-21
WP_013642124.1|1245507_1246662_-	molecular chaperone DnaJ	NA	Q8QNB4	Ectocarpus_siliculosus_virus	26.7	3.2e-24
>prophage 2
NC_017470	Lactobacillus amylovorus GRL1118, complete sequence	1894401	1286112	1298493	1894401	transposase	Bacillus_phage(25.0%)	14	NA	NA
WP_014565950.1|1286112_1288056_-	M13 family metallopeptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	28.6	5.9e-63
WP_014565951.1|1288149_1289946_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.3	2.5e-44
WP_014565952.1|1289938_1291705_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	28.3	5.7e-49
WP_013438154.1|1291788_1292007_-	YneF family protein	NA	NA	NA	NA	NA
WP_013438155.1|1292072_1292336_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_013438156.1|1292486_1293113_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	53.7	8.9e-13
WP_014565953.1|1293147_1293936_-	SGNH/GDSL hydrolase family protein	NA	W0TW81	Staphylococcus_phage	25.6	1.2e-06
WP_014565954.1|1293935_1294583_-	uracil-DNA glycosylase	NA	A0A218MKQ4	uncultured_virus	31.5	5.0e-11
WP_003629071.1|1294925_1295273_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014565955.1|1295468_1295666_+	low temperature requirement protein A	NA	NA	NA	NA	NA
WP_082231541.1|1295714_1295954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082231542.1|1295931_1296546_+	low temperature requirement protein A	NA	NA	NA	NA	NA
WP_013641431.1|1296597_1297062_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	48.9	4.8e-32
WP_014565958.1|1297161_1298493_+|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	38.7	2.1e-64
>prophage 3
NC_017470	Lactobacillus amylovorus GRL1118, complete sequence	1894401	1425377	1483434	1894401	transposase,protease,tRNA	Enterococcus_phage(18.18%)	50	NA	NA
WP_014566029.1|1425377_1426709_-|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	38.5	8.9e-63
WP_013641431.1|1426808_1427273_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	48.9	4.8e-32
WP_193363680.1|1427238_1427637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566031.1|1427893_1428649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566032.1|1428716_1429424_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_013438340.1|1429440_1429848_-	OsmC family protein	NA	NA	NA	NA	NA
WP_014566033.1|1429871_1431050_-	MFS transporter	NA	NA	NA	NA	NA
WP_014566034.1|1431754_1432294_-	GTP pyrophosphokinase	NA	NA	NA	NA	NA
WP_013438344.1|1432502_1432943_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013438345.1|1433103_1434576_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_013438346.1|1434575_1435142_+	DUF4811 domain-containing protein	NA	NA	NA	NA	NA
WP_014566035.1|1435185_1436223_-	serine hydrolase	NA	NA	NA	NA	NA
WP_013642249.1|1436447_1437653_+	MFS transporter	NA	NA	NA	NA	NA
WP_014566036.1|1437713_1438988_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	23.6	1.6e-13
WP_013642252.1|1439886_1441329_-	sucrose phosphorylase	NA	NA	NA	NA	NA
WP_014566039.1|1441339_1443541_-	alpha-galactosidase	NA	NA	NA	NA	NA
WP_013642254.1|1443553_1444666_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	32.9	2.0e-23
WP_013438351.1|1444692_1445526_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_007126478.1|1445540_1446416_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_014566040.1|1446428_1447682_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_013642256.1|1447931_1448765_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_013438354.1|1448807_1449794_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014566041.1|1449796_1451260_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_013642259.1|1451280_1452444_-	galactokinase	NA	NA	NA	NA	NA
WP_013642261.1|1452987_1453374_-	PTS cellbiose transporter subunit IIC	NA	NA	NA	NA	NA
WP_013642262.1|1453498_1454215_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013642263.1|1454366_1455011_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_014566043.1|1455536_1457543_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_014566044.1|1457553_1459473_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_014566045.1|1459665_1460673_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_014566046.1|1460897_1462778_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	34.3	1.7e-96
WP_014566047.1|1462761_1463712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013438365.1|1463814_1464807_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.6	1.9e-46
WP_013642269.1|1464976_1465300_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_014565539.1|1465467_1466799_-|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	38.2	3.4e-62
WP_014566048.1|1466898_1467363_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	48.1	2.4e-31
WP_014566049.1|1467605_1468166_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_166484902.1|1469489_1469717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014566052.1|1470001_1473355_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_014566053.1|1473357_1474398_-	Eco57I restriction-modification methylase domain-containing protein	NA	A0A1V0SF57	Hokovirus	23.7	4.4e-17
WP_014566054.1|1474394_1475054_-	hypothetical protein	NA	A0A1D8KUI1	Synechococcus_phage	29.5	9.4e-05
WP_014566055.1|1475034_1475628_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	40.6	6.2e-32
WP_014566057.1|1476158_1477151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566058.1|1477254_1478133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013642275.1|1478336_1479674_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_013642276.1|1479815_1481063_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_013642277.1|1481055_1481976_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_014566059.1|1482053_1482455_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_013438376.1|1482513_1482744_-	YqgQ family protein	NA	NA	NA	NA	NA
WP_013438377.1|1482753_1483434_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 4
NC_017470	Lactobacillus amylovorus GRL1118, complete sequence	1894401	1527181	1535949	1894401		Prochlorococcus_phage(33.33%)	9	NA	NA
WP_014566079.1|1527181_1527778_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	34.1	7.4e-25
WP_014566080.1|1527787_1528825_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.2	5.5e-60
WP_013438443.1|1528826_1530278_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.4	4.1e-61
WP_013438444.1|1530253_1532482_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	2.7e-144
WP_014566081.1|1532478_1533150_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_013438446.1|1533146_1533401_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_013642318.1|1533401_1534118_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	38.7	1.3e-39
WP_014566082.1|1534322_1535498_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_014566083.1|1535463_1535949_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.1	2.4e-21
>prophage 5
NC_017470	Lactobacillus amylovorus GRL1118, complete sequence	1894401	1699710	1707102	1894401		Clostridioides_phage(33.33%)	8	NA	NA
WP_014566171.1|1699710_1700766_-	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	31.2	1.9e-15
WP_014566172.1|1700868_1701060_-	DUF1828 domain-containing protein	NA	Q6SEA4	Lactobacillus_prophage	51.6	1.1e-09
WP_014566173.1|1701244_1702519_+	GTPase HflX	NA	NA	NA	NA	NA
WP_014566174.1|1702525_1703527_+	CAP domain-containing protein	NA	NA	NA	NA	NA
WP_014566175.1|1703729_1704605_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	44.7	8.0e-20
WP_013642459.1|1704777_1705545_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	40.7	2.1e-16
WP_013438629.1|1705815_1706370_-	C40 family peptidase	NA	M9MUG9	Rhodococcus_phage	38.8	1.2e-16
WP_014566176.1|1706553_1707102_-	AAA family ATPase	NA	A0A0K2FM14	Brevibacillus_phage	28.9	1.9e-11
>prophage 1
NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	78145	0	10035	78145		Liberibacter_phage(100.0%)	6	NA	NA
WP_014566279.1|1509_2697_-	SLAP domain-containing protein	NA	NA	NA	NA	NA
WP_014566280.1|2852_3659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566281.1|3800_3947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566282.1|5459_5990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014566283.1|6116_7946_+	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_014566284.1|7947_10035_+	type I restriction-modification system subunit M	NA	A0A220A2U4	Liberibacter_phage	26.4	6.1e-26
>prophage 2
NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	78145	15085	19607	78145	transposase	Staphylococcus_prophage(33.33%)	4	NA	NA
WP_013437050.1|15085_16120_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	31.8	1.5e-33
WP_014566288.1|16286_16589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566289.1|16671_17550_-	ParA family protein	NA	A0A1V0DZZ0	Clostridioides_phage	27.9	6.2e-12
WP_014566290.1|17777_19607_+	AAA family ATPase	NA	A0A2I7R7D8	Vibrio_phage	36.2	1.3e-56
>prophage 3
NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	78145	43268	46877	78145		Leptospira_phage(50.0%)	2	NA	NA
WP_014566314.1|43268_46115_-	methylase	NA	Q6NE04	Leptospira_phage	33.5	1.9e-131
WP_014566315.1|46289_46877_+	recombinase family protein	NA	A0A0A8WIK3	Clostridium_phage	39.1	8.0e-32
>prophage 4
NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	78145	52711	66271	78145	integrase	Streptococcus_phage(75.0%)	7	48323:48338	75906:75921
48323:48338	attL	ATACTTCTTTTCTTAA	NA	NA	NA	NA
WP_014566323.1|52711_54217_+	ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	23.9	4.3e-21
WP_014566327.1|57155_59084_+	tetracycline resistance ribosomal protection protein Tet(W)	NA	E4ZFJ7	Streptococcus_phage	99.8	0.0e+00
WP_014566328.1|59139_60090_+	SLAP domain-containing protein	NA	NA	NA	NA	NA
WP_014566329.1|60335_61316_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	25.1	4.8e-13
WP_118027589.1|62888_63188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014566333.1|63552_63984_+	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_014566334.1|64117_66271_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	30.4	2.7e-61
75906:75921	attR	TTAAGAAAAGAAGTAT	NA	NA	NA	NA
>prophage 5
NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	78145	69753	70095	78145		Streptococcus_phage(100.0%)	1	NA	NA
WP_014566338.1|69753_70095_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	43.7	1.2e-11
