assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	1	693589-693695	1	CRISPRCasFinder	no	cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Type III-D,Type III-A,Type III-C,Type III-B	GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC	35	0	0	NA	NA	NA	1	1	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA|64aa|up_7|NC_015276.1_687257_687449_-,NA|124aa|up_1|NC_015276.1_692155_692527_+,PD-DExK|257aa|down_2|NC_015276.1_701478_702249_-,NA|190aa|down_3|NC_015276.1_702289_702859_-	NA|406aa|up_9|NC_015276.1_685332_686550_-	pfam16539, FlgT_M, Flagellar assembly protein T, middle domain	NA|203aa|up_8|NC_015276.1_686563_687172_-	pfam02169, LPP20, LPP20 lipoprotein	NA|64aa|up_7|NC_015276.1_687257_687449_-	NA	NA|352aa|up_6|NC_015276.1_687620_688676_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|328aa|up_5|NC_015276.1_688919_689903_+	COG4240, COG4240, Predicted kinase [General function prediction only]	NA|222aa|up_4|NC_015276.1_690062_690728_+	pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase	NA|266aa|up_3|NC_015276.1_690727_691525_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|154aa|up_2|NC_015276.1_691686_692148_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|124aa|up_1|NC_015276.1_692155_692527_+	NA	NA|276aa|up_0|NC_015276.1_692601_693429_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	cas2|93aa|down_0|NC_015276.1_698321_698600_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|958aa|down_1|NC_015276.1_698596_701470_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	PD-DExK|257aa|down_2|NC_015276.1_701478_702249_-	NA	NA|190aa|down_3|NC_015276.1_702289_702859_-	NA	cmr6gr7|372aa|down_4|NC_015276.1_702959_704075_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|141aa|down_5|NC_015276.1_704071_704494_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|301aa|down_6|NC_015276.1_704493_705396_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|406aa|down_7|NC_015276.1_705395_706613_-	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cas10|636aa|down_8|NC_015276.1_706612_708520_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|424aa|down_9|NC_015276.1_708522_709794_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	2	693937-698090	2,1,2,1,3,4	CRISPRCasFinder,PILER-CR,PILER-CR,CRT,PILER-CR,PILER-CR	no	cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Type III-D,Type III-A,Type III-C,Type III-B	GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC,GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACA,GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC,GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACNNNNNNNNN,GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC,CGGCCAGCGGGTCTGAAAC	35,36,35,44,35,19	0	0	NA	NA	NA:NA:NA:NA:NA:NA	58,54,54,52,54,54	58	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA|64aa|up_7|NC_015276.1_687257_687449_-,NA|124aa|up_1|NC_015276.1_692155_692527_+,PD-DExK|257aa|down_2|NC_015276.1_701478_702249_-,NA|190aa|down_3|NC_015276.1_702289_702859_-	NA|406aa|up_9|NC_015276.1_685332_686550_-	pfam16539, FlgT_M, Flagellar assembly protein T, middle domain	NA|203aa|up_8|NC_015276.1_686563_687172_-	pfam02169, LPP20, LPP20 lipoprotein	NA|64aa|up_7|NC_015276.1_687257_687449_-	NA	NA|352aa|up_6|NC_015276.1_687620_688676_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|328aa|up_5|NC_015276.1_688919_689903_+	COG4240, COG4240, Predicted kinase [General function prediction only]	NA|222aa|up_4|NC_015276.1_690062_690728_+	pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase	NA|266aa|up_3|NC_015276.1_690727_691525_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|154aa|up_2|NC_015276.1_691686_692148_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|124aa|up_1|NC_015276.1_692155_692527_+	NA	NA|276aa|up_0|NC_015276.1_692601_693429_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	cas2|93aa|down_0|NC_015276.1_698321_698600_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|958aa|down_1|NC_015276.1_698596_701470_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	PD-DExK|257aa|down_2|NC_015276.1_701478_702249_-	NA	NA|190aa|down_3|NC_015276.1_702289_702859_-	NA	cmr6gr7|372aa|down_4|NC_015276.1_702959_704075_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|141aa|down_5|NC_015276.1_704071_704494_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|301aa|down_6|NC_015276.1_704493_705396_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|406aa|down_7|NC_015276.1_705395_706613_-	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cas10|636aa|down_8|NC_015276.1_706612_708520_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|424aa|down_9|NC_015276.1_708522_709794_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	3	710346-710944	3,2,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Type III-D,Type III-A,Type III-C,Type III-B	GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC,GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACNNNNNNNNN,GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC	35,44,35	0	0	NA	NA	NA:NA:NA	8,8,7	8	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	PD-DExK|257aa|up_7|NC_015276.1_701478_702249_-,NA|190aa|up_6|NC_015276.1_702289_702859_-,NA	cas2|93aa|up_9|NC_015276.1_698321_698600_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|958aa|up_8|NC_015276.1_698596_701470_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	PD-DExK|257aa|up_7|NC_015276.1_701478_702249_-	NA	NA|190aa|up_6|NC_015276.1_702289_702859_-	NA	cmr6gr7|372aa|up_5|NC_015276.1_702959_704075_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|141aa|up_4|NC_015276.1_704071_704494_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|301aa|up_3|NC_015276.1_704493_705396_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|406aa|up_2|NC_015276.1_705395_706613_-	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cas10|636aa|up_1|NC_015276.1_706612_708520_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|424aa|up_0|NC_015276.1_708522_709794_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|146aa|down_0|NC_015276.1_711391_711829_-	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|168aa|down_1|NC_015276.1_712187_712691_+	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|295aa|down_2|NC_015276.1_712687_713572_+	PRK10302, PRK10302, hypothetical protein; Provisional	NA|104aa|down_3|NC_015276.1_713662_713974_+	COG3323, COG3323, Uncharacterized protein conserved in bacteria [Function unknown]	NA|182aa|down_4|NC_015276.1_714069_714615_-	cd04511, Nudix_Hydrolase_4, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|419aa|down_5|NC_015276.1_714640_715897_-	COG4536, CorB, Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]	NA|256aa|down_6|NC_015276.1_716014_716782_-	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|467aa|down_7|NC_015276.1_716966_718367_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|83aa|down_8|NC_015276.1_718553_718802_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|182aa|down_9|NC_015276.1_718818_719364_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	4	1731633-1732016	6	PILER-CR	no		WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	TGCCGGTATAGCTCAGTTGGTAGAGCATCTGACTTGTAATCAGAGGGTCCCGA	53	0	0	NA	NA	NA	3	3	Orphan	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA|301aa|up_5|NC_015276.1_1724520_1725423_+,NA	NA|272aa|up_9|NC_015276.1_1721104_1721920_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|136aa|up_8|NC_015276.1_1721964_1722372_-	PRK13290, ectC, L-ectoine synthase; Reviewed	NA|432aa|up_7|NC_015276.1_1722384_1723680_-	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate transaminase	NA|168aa|up_6|NC_015276.1_1723699_1724203_-	TIGR02406, L-24-diaminobutyric_acid_acetyltransferase, diaminobutyrate acetyltransferase	NA|301aa|up_5|NC_015276.1_1724520_1725423_+	NA	NA|354aa|up_4|NC_015276.1_1725759_1726821_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|373aa|up_3|NC_015276.1_1726853_1727972_+	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|109aa|up_2|NC_015276.1_1728081_1728408_+	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|618aa|up_1|NC_015276.1_1728484_1730338_+	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|305aa|up_0|NC_015276.1_1730347_1731262_+	PRK13022, secF, protein translocase subunit SecF	NA|115aa|down_0|NC_015276.1_1733793_1734138_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|394aa|down_1|NC_015276.1_1734304_1735486_-	pfam03594, BenE, Benzoate membrane transport protein	NA|133aa|down_2|NC_015276.1_1735540_1735939_-	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|262aa|down_3|NC_015276.1_1736119_1736905_-	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional	NA|339aa|down_4|NC_015276.1_1736916_1737933_-	cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain	NA|165aa|down_5|NC_015276.1_1738035_1738530_-	TIGR03232, benzo_1_2_benB, benzoate 1,2-dioxygenase, small subunit	NA|449aa|down_6|NC_015276.1_1738540_1739887_-	TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenase, large subunit	NA|321aa|down_7|NC_015276.1_1740218_1741181_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|392aa|down_8|NC_015276.1_1741490_1742666_+	cd20014, PBP1_RPA0668_benzoate-like, type 1 periplasmic binding-protein component of an ABC system (RPA0668), involved in in the active transport of lignin-derived benzoate derivative compounds, and its close homologs	NA|288aa|down_9|NC_015276.1_1742808_1743672_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	5	2572933-2573059	4	CRISPRCasFinder	no		WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	GGGGAGGAGCAAGTTGCGAGTCAGGTTTAACTGGGGGATTTAGTAGA	47	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA|247aa|up_6|NC_015276.1_2565723_2566464_+,NA|262aa|up_3|NC_015276.1_2568490_2569276_+,NA|261aa|up_2|NC_015276.1_2569488_2570271_+,NA	NA|259aa|up_9|NC_015276.1_2558596_2559373_-	TIGR00229, Sensor_protein_FixL, PAS domain S-box	NA|350aa|up_8|NC_015276.1_2560263_2561313_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|1458aa|up_7|NC_015276.1_2561337_2565711_+	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein	NA|247aa|up_6|NC_015276.1_2565723_2566464_+	NA	NA|100aa|up_5|NC_015276.1_2566644_2566944_+	pfam07045, DUF1330, Domain of unknown function (DUF1330)	NA|386aa|up_4|NC_015276.1_2567143_2568301_+	cd04056, Peptidases_S53, Peptidase domain in the S53 family	NA|262aa|up_3|NC_015276.1_2568490_2569276_+	NA	NA|261aa|up_2|NC_015276.1_2569488_2570271_+	NA	NA|415aa|up_1|NC_015276.1_2570524_2571769_+	pfam02624, YcaO, YcaO cyclodehydratase, ATP-ad Mg2+-binding	NA|371aa|up_0|NC_015276.1_2571768_2572881_+	NF033432, ThioGly_TfuA_rel, TfuA-related McrA-glycine thioamidation protein	NA|288aa|down_0|NC_015276.1_2573212_2574076_-	COG0313, COG0313, Predicted methyltransferases [General function prediction only]	NA|618aa|down_1|NC_015276.1_2574110_2575964_+	cd06339, PBP1_YraM_LppC_lipoprotein-like, periplasmic binding component of lipoprotein LppC, an immunodominant antigen	NA|131aa|down_2|NC_015276.1_2575920_2576313_+	PRK12497, PRK12497, YraN family protein	NA|198aa|down_3|NC_015276.1_2576317_2576911_+	PRK13936, PRK13936, phosphoheptose isomerase; Provisional	NA|261aa|down_4|NC_015276.1_2577005_2577788_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|632aa|down_5|NC_015276.1_2577780_2579676_-	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|160aa|down_6|NC_015276.1_2579799_2580279_-	PRK05170, PRK05170, YcgN family cysteine cluster protein	NA|97aa|down_7|NC_015276.1_2580278_2580569_-	pfam05166, YcgL, YcgL domain	NA|384aa|down_8|NC_015276.1_2580583_2581735_-	TIGR01388, Ribonuclease_D, ribonuclease D	NA|198aa|down_9|NC_015276.1_2581736_2582330_-	PRK00076, recR, recombination protein RecR; Reviewed
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	6	3643810-3646958	7,5,3	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Type I-F	TTTCTAAGCTGCGTGTACGGCAGCGAAC,TTTCTAAGCTGCGTGTACGGCAGCGAAC,TTTCTAAGCTGCGTGTACGGCAGCGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	52,52,52	52	TypeI-F	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA,NA|56aa|down_4|NC_015276.1_3651049_3651217_-	NA|311aa|up_9|NC_015276.1_3634432_3635365_-	TIGR03414, ABC_choline_bnd, choline ABC transporter, periplasmic binding protein	NA|194aa|up_8|NC_015276.1_3635431_3636013_-	PRK00767, PRK00767, transcriptional regulator BetI; Validated	NA|399aa|up_7|NC_015276.1_3636454_3637651_+	TIGR04350, aminotransferase_class_I_and_II, putative C-S lyase	NA|150aa|up_6|NC_015276.1_3637707_3638157_+	pfam08818, DUF1801, Domain of unknown function (DU1801)	NA|268aa|up_5|NC_015276.1_3638192_3638996_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|229aa|up_4|NC_015276.1_3639000_3639687_+	pfam04337, DUF480, Protein of unknown function, DUF480	NA|348aa|up_3|NC_015276.1_3639724_3640768_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|313aa|up_2|NC_015276.1_3640799_3641738_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|301aa|up_1|NC_015276.1_3641807_3642710_-	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|233aa|up_0|NC_015276.1_3642865_3643564_+	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	cas6f|202aa|down_0|NC_015276.1_3647087_3647693_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|346aa|down_1|NC_015276.1_3647708_3648746_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|332aa|down_2|NC_015276.1_3648787_3649783_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|427aa|down_3|NC_015276.1_3649779_3651060_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	NA|56aa|down_4|NC_015276.1_3651049_3651217_-	NA	cas3f|1125aa|down_5|NC_015276.1_3651445_3654820_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|326aa|down_6|NC_015276.1_3654816_3655794_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	WYL|288aa|down_7|NC_015276.1_3655922_3656786_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|394aa|down_8|NC_015276.1_3657011_3658193_-	pfam13679, Methyltransf_32, Methyltransferase domain	NA|399aa|down_9|NC_015276.1_3658384_3659581_+	PRK09257, PRK09257, aromatic amino acid transaminase
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	7	3896421-3898668	6,4,8	CRISPRCasFinder,CRT,PILER-CR	no		WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	TTTCTAAGCTGCGTGTGCGGCAGCGAAC,TTTCTAAGCTGCGTGTGCGGCAGCGAAC,TTTCTAAGCTGCGTGTGCGGCAGCGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	37,37,36	37	Orphan	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA,NA|223aa|down_4|NC_015276.1_3903905_3904574_-	NA|239aa|up_9|NC_015276.1_3884129_3884846_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|294aa|up_8|NC_015276.1_3884839_3885721_-	PRK11300, livG, leucine/isoleucine/valine transporter ATP-binding subunit; Provisional	NA|427aa|up_7|NC_015276.1_3885717_3886998_-	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional	NA|304aa|up_6|NC_015276.1_3886997_3887909_-	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH	NA|372aa|up_5|NC_015276.1_3887995_3889111_-	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|345aa|up_4|NC_015276.1_3889817_3890852_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|424aa|up_3|NC_015276.1_3890852_3892124_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|379aa|up_2|NC_015276.1_3892166_3893303_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|512aa|up_1|NC_015276.1_3893374_3894910_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|309aa|up_0|NC_015276.1_3895168_3896095_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|424aa|down_0|NC_015276.1_3898995_3900267_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|515aa|down_1|NC_015276.1_3900382_3901927_-	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B	NA|281aa|down_2|NC_015276.1_3902091_3902934_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|268aa|down_3|NC_015276.1_3903054_3903858_+	cd16350, VOC_like, uncharacterized subfamily of the vicinal oxygen chelate (VOC) family	NA|223aa|down_4|NC_015276.1_3903905_3904574_-	NA	NA|139aa|down_5|NC_015276.1_3905031_3905448_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|85aa|down_6|NC_015276.1_3905463_3905718_+	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|159aa|down_7|NC_015276.1_3905766_3906243_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|553aa|down_8|NC_015276.1_3906548_3908207_+	COG3014, COG3014, Uncharacterized protein conserved in bacteria [Function unknown]	NA|200aa|down_9|NC_015276.1_3908279_3908879_+	pfam13036, LpoB, Peptidoglycan-synthase activator LpoB
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	8	3931695-3931826	7	CRISPRCasFinder	no		WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	GATGTGCTTGTAATGTCGTTGAATGACCTCCTTTTAATCTCCCCC	45	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA|258aa|up_1|NC_015276.1_3928996_3929770_-,NA|428aa|up_0|NC_015276.1_3929874_3931158_-,NA|121aa|down_1|NC_015276.1_3933963_3934326_+,NA|75aa|down_7|NC_015276.1_3940636_3940861_-	NA|214aa|up_9|NC_015276.1_3922862_3923504_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|256aa|up_8|NC_015276.1_3923749_3924517_+	PRK10494, PRK10494, envelope biogenesis factor ElyC	NA|221aa|up_7|NC_015276.1_3924626_3925289_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|467aa|up_6|NC_015276.1_3925301_3926702_-	TIGR01820, Anthranilate_synthase_component_1, anthranilate synthase component I, archaeal clade	NA|80aa|up_5|NC_015276.1_3926688_3926928_-	pfam01371, Trp_repressor, Trp repressor protein	NA|99aa|up_4|NC_015276.1_3927131_3927428_+	pfam03992, ABM, Antibiotic biosynthesis monooxygenase	NA|163aa|up_3|NC_015276.1_3927492_3927981_-	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA|285aa|up_2|NC_015276.1_3928061_3928916_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|258aa|up_1|NC_015276.1_3928996_3929770_-	NA	NA|428aa|up_0|NC_015276.1_3929874_3931158_-	NA	NA|589aa|down_0|NC_015276.1_3931906_3933673_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|121aa|down_1|NC_015276.1_3933963_3934326_+	NA	NA|104aa|down_2|NC_015276.1_3934493_3934805_+	cd02226, cupin_YdbB-like, Bacillus subtilis YdbB and related proteins, cupin domain	NA|543aa|down_3|NC_015276.1_3935162_3936791_+	cd01948, EAL, EAL domain	NA|309aa|down_4|NC_015276.1_3936782_3937709_-	cd11599, HDAC_classII_2, Histone deacetylases and histone-like deacetylases, classII	NA|813aa|down_5|NC_015276.1_3937886_3940325_+	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain	NA|102aa|down_6|NC_015276.1_3940330_3940636_-	pfam07978, NIPSNAP, NIPSNAP	NA|75aa|down_7|NC_015276.1_3940636_3940861_-	NA	NA|461aa|down_8|NC_015276.1_3940967_3942350_-	PRK09229, PRK09229, N-formimino-L-glutamate deiminase; Validated	NA|248aa|down_9|NC_015276.1_3942515_3943259_+	TIGR02018, Histidine_utilization_repressor, histidine utilization repressor, proteobacterial
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	9	4070916-4071014	8	CRISPRCasFinder	no		WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	CCATAAACCTAGCACCAGACAAAT	24	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA|71aa|up_8|NC_015276.1_4065239_4065452_+,NA|172aa|up_7|NC_015276.1_4065653_4066169_+,NA|288aa|up_6|NC_015276.1_4066369_4067233_+,NA|208aa|up_5|NC_015276.1_4067271_4067895_+,NA|135aa|up_4|NC_015276.1_4067904_4068309_+,NA|76aa|up_2|NC_015276.1_4068494_4068722_-,NA|169aa|up_1|NC_015276.1_4069001_4069508_+,NA|317aa|up_0|NC_015276.1_4069632_4070583_-,NA|361aa|down_0|NC_015276.1_4071779_4072862_+,NA|181aa|down_1|NC_015276.1_4072903_4073446_+	NA|135aa|up_9|NC_015276.1_4064102_4064507_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|71aa|up_8|NC_015276.1_4065239_4065452_+	NA	NA|172aa|up_7|NC_015276.1_4065653_4066169_+	NA	NA|288aa|up_6|NC_015276.1_4066369_4067233_+	NA	NA|208aa|up_5|NC_015276.1_4067271_4067895_+	NA	NA|135aa|up_4|NC_015276.1_4067904_4068309_+	NA	NA|50aa|up_3|NC_015276.1_4068367_4068517_-	PRK11032, PRK11032, zinc ribbon-containing protein	NA|76aa|up_2|NC_015276.1_4068494_4068722_-	NA	NA|169aa|up_1|NC_015276.1_4069001_4069508_+	NA	NA|317aa|up_0|NC_015276.1_4069632_4070583_-	NA	NA|361aa|down_0|NC_015276.1_4071779_4072862_+	NA	NA|181aa|down_1|NC_015276.1_4072903_4073446_+	NA	NA|134aa|down_2|NC_015276.1_4073695_4074097_+	PHA02601, int, integrase; Provisional	NA|158aa|down_3|NC_015276.1_4074671_4075145_+	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|367aa|down_4|NC_015276.1_4075153_4076254_+	pfam07885, Ion_trans_2, Ion channel	NA|180aa|down_5|NC_015276.1_4076346_4076886_-	pfam06041, DUF924, Bacterial protein of unknown function (DUF924)	NA|84aa|down_6|NC_015276.1_4077006_4077258_-	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|163aa|down_7|NC_015276.1_4077317_4077806_-	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|181aa|down_8|NC_015276.1_4077962_4078505_-	pfam02325, YGGT, YGGT family	NA|274aa|down_9|NC_015276.1_4078514_4079336_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed
GCF_000192865.1_ASM19286v1	NC_015276	Marinomonas mediterranea MMB-1, complete sequence	10	4118177-4118290	9	CRISPRCasFinder	no		WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	AGGAGCAGATGGCAGATCATTTAATGTACT	30	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,cas2,cas1,PD-DExK,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csa3,cas3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	NA,NA|206aa|down_7|NC_015276.1_4126088_4126706_+,NA|260aa|down_9|NC_015276.1_4127626_4128406_+	NA|345aa|up_9|NC_015276.1_4106697_4107732_+	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|408aa|up_8|NC_015276.1_4107799_4109023_-	PRK07179, PRK07179, quorum-sensing autoinducer synthase	NA|188aa|up_7|NC_015276.1_4109589_4110153_-	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein	NA|423aa|up_6|NC_015276.1_4110389_4111658_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|265aa|up_5|NC_015276.1_4111895_4112690_-	smart00318, SNc, Staphylococcal nuclease homologues	NA|72aa|up_4|NC_015276.1_4112698_4112914_-	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|744aa|up_3|NC_015276.1_4113169_4115401_+	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|211aa|up_2|NC_015276.1_4115459_4116092_+	pfam05036, SPOR, Sporulation related domain	NA|184aa|up_1|NC_015276.1_4116231_4116783_+	PRK05456, PRK05456, ATP-dependent protease subunit HslV	NA|442aa|up_0|NC_015276.1_4116814_4118140_+	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU	NA|126aa|down_0|NC_015276.1_4118369_4118747_+	COG3536, COG3536, Uncharacterized protein conserved in bacteria [Function unknown]	NA|209aa|down_1|NC_015276.1_4118764_4119391_+	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown]	NA|403aa|down_2|NC_015276.1_4119387_4120596_-	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase	NA|326aa|down_3|NC_015276.1_4120659_4121637_-	cd08963, L-asparaginase_I, Type I (cytosolic) bacterial L-asparaginase	NA|299aa|down_4|NC_015276.1_4121756_4122653_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|578aa|down_5|NC_015276.1_4122813_4124547_-	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|161aa|down_6|NC_015276.1_4125485_4125968_+	cd14523, DSP_DUSP19, dual specificity phosphatase domain of dual specificity protein phosphatase 19	NA|206aa|down_7|NC_015276.1_4126088_4126706_+	NA	NA|260aa|down_8|NC_015276.1_4126763_4127543_+	pfam13676, TIR_2, TIR domain	NA|260aa|down_9|NC_015276.1_4127626_4128406_+	NA
