The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_015145	Pseudarthrobacter phenanthrenivorans Sphe3, complete sequence	4250414	2335095	2372693	4250414	integrase,transposase	Shigella_phage(54.55%)	36	2347485:2347500	2371580:2371595
WP_041652099.1|2335095_2335341_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013601257.1|2336784_2337423_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	28.6	5.5e-10
WP_013601258.1|2337419_2337749_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_013601259.1|2338046_2338835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013601261.1|2339830_2340832_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	28.3	5.2e-07
WP_174266596.1|2340828_2341191_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_081459842.1|2341292_2341580_-	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_013599941.1|2341822_2342113_+|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013599940.1|2342118_2343003_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	37.8	3.9e-38
WP_013601263.1|2343107_2343917_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_013599941.1|2344307_2344598_+|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013599940.1|2344603_2345488_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	37.8	3.9e-38
WP_017201940.1|2345541_2345748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167536981.1|2346385_2346541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013601264.1|2346639_2346867_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
2347485:2347500	attL	GTCGACGCCGACGATG	NA	NA	NA	NA
WP_013601267.1|2348104_2348599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041652101.1|2348598_2348871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081459845.1|2349012_2349270_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013601269.1|2349250_2350666_-	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA	NA
WP_013601270.1|2350788_2351820_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_013601271.1|2351816_2352980_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_041652847.1|2353149_2354100_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_013599941.1|2356854_2357145_+|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013601276.1|2357150_2358035_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	37.8	3.9e-38
WP_013601278.1|2359183_2360068_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	38.0	1.9e-37
WP_013599941.1|2360073_2360364_-|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013601280.1|2361794_2363204_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_013601261.1|2363272_2364274_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	28.3	5.2e-07
WP_174266596.1|2364270_2364633_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013601281.1|2364945_2365404_-	VOC family protein	NA	NA	NA	NA	NA
WP_148258168.1|2365490_2365952_-	phospholipase	NA	NA	NA	NA	NA
WP_013601283.1|2365969_2366386_-	DoxX family protein	NA	NA	NA	NA	NA
WP_013601284.1|2366508_2366868_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013601285.1|2367926_2369042_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_013601288.1|2370955_2371246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013601289.1|2371547_2372693_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
2371580:2371595	attR	CATCGTCGGCGTCGAC	NA	NA	NA	NA
>prophage 2
NC_015145	Pseudarthrobacter phenanthrenivorans Sphe3, complete sequence	4250414	2973984	2994335	4250414	tRNA,transposase	Tupanvirus(25.0%)	28	NA	NA
WP_013601810.1|2973984_2974875_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_013601811.1|2974907_2975486_-	50S ribosomal protein L17	NA	NA	NA	NA	NA
WP_013601812.1|2975554_2976565_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA	NA
WP_009358720.1|2976696_2977098_-	30S ribosomal protein S11	NA	NA	NA	NA	NA
WP_003803743.1|2977152_2977527_-	30S ribosomal protein S13	NA	NA	NA	NA	NA
WP_009358722.1|2977701_2977815_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_009358723.1|2977884_2978106_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_041652978.1|2978275_2979211_-	P1 family peptidase	NA	NA	NA	NA	NA
WP_013601814.1|2979316_2980144_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_013601815.1|2980215_2980785_-	adenylate kinase	NA	A0A2K9L833	Tupanvirus	32.0	5.8e-11
WP_013601816.1|2980790_2982101_-	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
WP_013601817.1|2982316_2982802_-	50S ribosomal protein L15	NA	NA	NA	NA	NA
WP_013601818.1|2982802_2983009_-	50S ribosomal protein L30	NA	NA	NA	NA	NA
WP_013601819.1|2983011_2983740_-	30S ribosomal protein S5	NA	NA	NA	NA	NA
WP_013601820.1|2983736_2984120_-	50S ribosomal protein L18	NA	NA	NA	NA	NA
WP_013601821.1|2984122_2984659_-	50S ribosomal protein L6	NA	NA	NA	NA	NA
WP_041652213.1|2984677_2985076_-	30S ribosomal protein S8	NA	NA	NA	NA	NA
WP_013601823.1|2985165_2985747_-	50S ribosomal protein L5	NA	NA	NA	NA	NA
WP_013601824.1|2985746_2986109_-	50S ribosomal protein L24	NA	NA	NA	NA	NA
WP_009358299.1|2986112_2986481_-	50S ribosomal protein L14	NA	NA	NA	NA	NA
WP_013601825.1|2986970_2987717_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_013599339.1|2987704_2988907_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_013600137.1|2989014_2989803_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	42.4	8.2e-48
WP_148258079.1|2989802_2991020_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_049785998.1|2991240_2991753_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.0	7.7e-23
WP_167536972.1|2992037_2992364_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013599790.1|2992360_2992963_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	43.7	7.2e-36
WP_013599791.1|2993225_2994335_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NC_015146	Pseudarthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, complete sequence	190450	16025	71586	190450	integrase,transposase	Acinetobacter_phage(30.0%)	46	11516:11533	31309:31326
11516:11533	attL	TCGCGGACGGCGCGGTCA	NA	NA	NA	NA
WP_013599791.1|16025_17135_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_081459903.1|17397_18012_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0P0I4A4	Acinetobacter_phage	30.6	1.7e-16
WP_013602961.1|18008_18173_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_013602964.1|20329_21043_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013602965.1|21493_21826_-|transposase	transposase	transposase	A0A1B3AZE5	Gordonia_phage	67.6	8.2e-34
WP_013602966.1|21871_22756_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	35.9	1.2e-39
WP_013599941.1|22761_23052_-|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013602969.1|23957_24470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013602970.1|24586_24982_-	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA	NA
WP_013602971.1|25176_26625_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_013602972.1|26627_27161_+	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_013602973.1|27174_27447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013602974.1|27450_28266_+	3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.7	1.7e-11
WP_013602975.1|28399_29404_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_013602976.1|30245_31697_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
31309:31326	attR	TCGCGGACGGCGCGGTCA	NA	NA	NA	NA
WP_013602978.1|33703_34333_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013602979.1|34398_35394_-	MFS transporter	NA	NA	NA	NA	NA
WP_041653571.1|35439_36276_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	36.4	5.3e-37
WP_013599339.1|37205_38408_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_167537007.1|39315_39639_+|transposase	transposase	transposase	U5P429	Shigella_phage	42.0	6.8e-09
WP_013602981.1|40263_41718_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_167537008.1|42067_42235_-	class II aldolase/adducin family protein	NA	NA	NA	NA	NA
WP_013602982.1|42329_43373_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_013602983.1|43369_44533_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_013603001.1|45838_46015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013603002.1|46048_46336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013602987.1|48432_48843_+	DoxX family protein	NA	NA	NA	NA	NA
WP_041653578.1|48848_49325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049786158.1|49369_49753_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_041653584.1|50799_51057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049786159.1|52319_53012_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_167537006.1|53083_53965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013602989.1|54102_54705_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	80.2	1.3e-45
WP_085930095.1|55090_55255_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041653589.1|55943_56561_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013602991.1|56633_57863_+	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
WP_041653591.1|58355_59579_-	MFS transporter	NA	NA	NA	NA	NA
WP_013599941.1|61469_61760_+|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013602996.1|63337_63529_-	ferredoxin	NA	NA	NA	NA	NA
WP_013602997.1|63554_64796_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013602998.1|64921_65800_-	VOC family protein	NA	NA	NA	NA	NA
WP_013602999.1|65786_66293_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_013603001.1|67592_67769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013603002.1|67802_68090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041652374.1|69485_71045_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013599941.1|71295_71586_+|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
>prophage 2
NC_015146	Pseudarthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, complete sequence	190450	90014	104494	190450	integrase,transposase	Acinetobacter_phage(40.0%)	13	92878:92892	112375:112389
WP_013603020.1|90014_91691_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_013603021.1|92215_93100_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	35.9	9.2e-40
92878:92892	attL	TGCCGGCGGCGGCCA	NA	NA	NA	NA
WP_013599941.1|93105_93396_-|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013599339.1|94346_95549_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_167537009.1|95735_96248_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.4	6.3e-25
WP_013599941.1|97375_97666_+|transposase	transposase	transposase	A9YX41	Burkholderia_phage	42.4	2.1e-09
WP_013603024.1|97671_98694_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	35.3	9.7e-33
WP_041653706.1|98991_99327_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013603026.1|99323_100430_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_167536970.1|100830_101283_-	META domain-containing protein	NA	NA	NA	NA	NA
WP_013599276.1|101395_102751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012311535.1|102923_103268_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012311534.1|103264_104494_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
112375:112389	attR	TGGCCGCCGCCGGCA	NA	NA	NA	NA
