assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000188715.1_ASM18871v1	NC_017567	Streptococcus dysgalactiae subsp. equisimilis ATCC 12394, complete sequence	1	1235689-1237374	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,DinG,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type II-A,Type II-B,Type II-C	GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	25,25,21	25	TypeII-A,TypeII-B,TypeII-C	cas3,DEDDh,DinG,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA|214aa|down_7|NC_017567.1_1247274_1247916_-	NA|270aa|up_9|NC_017567.1_1226745_1227555_-	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|164aa|up_8|NC_017567.1_1227571_1228063_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_7|NC_017567.1_1228082_1228508_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_6|NC_017567.1_1228714_1229734_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|390aa|up_5|NC_017567.1_1229844_1231014_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|99aa|up_4|NC_017567.1_1231203_1231500_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|77aa|up_3|NC_017567.1_1231499_1231730_-	pfam01721, Bacteriocin_II, Class II bacteriocin	NA|146aa|up_2|NC_017567.1_1232600_1233038_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|611aa|up_1|NC_017567.1_1233212_1235045_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|153aa|up_0|NC_017567.1_1235114_1235573_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	csn2|221aa|down_0|NC_017567.1_1237476_1238139_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NC_017567.1_1238128_1238470_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|NC_017567.1_1238466_1239336_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1372aa|down_3|NC_017567.1_1239335_1243451_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|210aa|down_4|NC_017567.1_1243927_1244557_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|251aa|down_5|NC_017567.1_1245319_1246072_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_6|NC_017567.1_1246082_1247213_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_7|NC_017567.1_1247274_1247916_-	NA	NA|319aa|down_8|NC_017567.1_1249447_1250404_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_9|NC_017567.1_1250400_1251252_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]
GCF_000188715.1_ASM18871v1	NC_017567	Streptococcus dysgalactiae subsp. equisimilis ATCC 12394, complete sequence	2	1581055-1583012	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DEDDh,DinG,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type I-U,Type I-C, Type I-U?	ATTTCAATCCACTCACCCGCGAAGGGTGAGAC,ATTTCAATCCACTCACCCGCGAAGGGTGAGAC,ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	29,29,28	29	TypeI-U,TypeI-C,TypeI-U?	cas3,DEDDh,DinG,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA	NA|158aa|up_9|NC_017567.1_1571139_1571613_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|239aa|up_8|NC_017567.1_1571790_1572507_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|360aa|up_7|NC_017567.1_1572520_1573600_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_6|NC_017567.1_1573672_1575406_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|247aa|up_5|NC_017567.1_1575402_1576143_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|369aa|up_4|NC_017567.1_1576230_1577337_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_3|NC_017567.1_1577379_1578003_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_2|NC_017567.1_1578015_1578726_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|311aa|up_1|NC_017567.1_1578945_1579878_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|320aa|up_0|NC_017567.1_1579969_1580929_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	cas2|98aa|down_0|NC_017567.1_1583160_1583454_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|NC_017567.1_1583464_1584490_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|225aa|down_2|NC_017567.1_1584486_1585161_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|283aa|down_3|NC_017567.1_1585162_1586011_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|632aa|down_4|NC_017567.1_1586015_1587911_-	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|243aa|down_5|NC_017567.1_1587910_1588639_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|809aa|down_6|NC_017567.1_1588901_1591328_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|883aa|down_7|NC_017567.1_1591594_1594243_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|188aa|down_8|NC_017567.1_1594244_1594808_-	pfam13238, AAA_18, AAA domain	NA|197aa|down_9|NC_017567.1_1594804_1595395_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
GCF_000188715.1_ASM18871v1	NC_017567	Streptococcus dysgalactiae subsp. equisimilis ATCC 12394, complete sequence	3	2120271-2120367	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Orphan	AAAAACCCAATTTTTTTTCGTCTTAT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA|58aa|up_9|NC_017567.1_2115440_2115614_-,NA|538aa|up_8|NC_017567.1_2115900_2117514_-,NA|174aa|up_7|NC_017567.1_2117503_2118025_-,NA|123aa|up_6|NC_017567.1_2118034_2118403_-,NA|66aa|up_5|NC_017567.1_2118311_2118509_-,NA|47aa|up_4|NC_017567.1_2118489_2118630_-,NA|111aa|up_3|NC_017567.1_2118626_2118959_-,NA|81aa|up_2|NC_017567.1_2119182_2119425_-,NA|175aa|down_0|NC_017567.1_2121178_2121703_+	NA|58aa|up_9|NC_017567.1_2115440_2115614_-	NA	NA|538aa|up_8|NC_017567.1_2115900_2117514_-	NA	NA|174aa|up_7|NC_017567.1_2117503_2118025_-	NA	NA|123aa|up_6|NC_017567.1_2118034_2118403_-	NA	NA|66aa|up_5|NC_017567.1_2118311_2118509_-	NA	NA|47aa|up_4|NC_017567.1_2118489_2118630_-	NA	NA|111aa|up_3|NC_017567.1_2118626_2118959_-	NA	NA|81aa|up_2|NC_017567.1_2119182_2119425_-	NA	NA|188aa|up_1|NC_017567.1_2119487_2120051_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|63aa|up_0|NC_017567.1_2120066_2120255_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|175aa|down_0|NC_017567.1_2121178_2121703_+	NA	NA|388aa|down_1|NC_017567.1_2121947_2123111_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|204aa|down_2|NC_017567.1_2123267_2123879_-	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|156aa|down_3|NC_017567.1_2124067_2124535_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|91aa|down_4|NC_017567.1_2124686_2124959_-	COG4466, Veg, Uncharacterized protein conserved in bacteria [Function unknown]	NA|454aa|down_5|NC_017567.1_2124974_2126336_-	PRK05748, PRK05748, replicative DNA helicase; Provisional	NA|151aa|down_6|NC_017567.1_2126371_2126824_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|659aa|down_7|NC_017567.1_2126820_2128797_-	COG3887, COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]	NA|633aa|down_8|NC_017567.1_2128887_2130786_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|150aa|down_9|NC_017567.1_2130837_2131287_-	cd04688, Nudix_Hydrolase_29, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
