assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	1	295268-295414	1	CRT	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	CGTCGAGGTCGTCGTCGA	18	0	0	NA	NA	NA	3	3	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|348aa|up_6|NC_014962.1_285287_286331_-,NA|746aa|up_0|NC_014962.1_292550_294788_+,NA	NA|624aa|up_9|NC_014962.1_281319_283191_-	pfam16949, ABC_tran_2, Putative ATP-binding cassette	NA|337aa|up_8|NC_014962.1_283477_284488_+	PRK09188, PRK09188, serine/threonine protein kinase; Provisional	NA|270aa|up_7|NC_014962.1_284481_285291_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|348aa|up_6|NC_014962.1_285287_286331_-	NA	NA|401aa|up_5|NC_014962.1_286706_287909_+	COG0820, COG0820, Predicted Fe-S-cluster redox enzyme [General function prediction only]	NA|229aa|up_4|NC_014962.1_288146_288833_+	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|301aa|up_3|NC_014962.1_288854_289757_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|332aa|up_2|NC_014962.1_289892_290888_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|392aa|up_1|NC_014962.1_291042_292218_-	PRK08912, PRK08912, aminotransferase	NA|746aa|up_0|NC_014962.1_292550_294788_+	NA	NA|350aa|down_0|NC_014962.1_296127_297177_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|597aa|down_1|NC_014962.1_297347_299138_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|752aa|down_2|NC_014962.1_299472_301728_+	pfam06439, DUF1080, Domain of Unknown Function (DUF1080)	NA|160aa|down_3|NC_014962.1_301850_302330_+	pfam13298, LigD_N, DNA polymerase Ligase (LigD)	NA|494aa|down_4|NC_014962.1_302721_304203_+	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|323aa|down_5|NC_014962.1_304619_305588_+	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|386aa|down_6|NC_014962.1_305848_307006_-	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|149aa|down_7|NC_014962.1_307333_307780_-	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed	NA|418aa|down_8|NC_014962.1_307776_309030_-	pfam14559, TPR_19, Tetratricopeptide repeat	NA|765aa|down_9|NC_014962.1_309400_311695_-	pfam02810, SEC-C, SEC-C motif
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	2	1670458-1670555	1	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	GACGCTCGCATCTCCAGAACGCGCGGGCTCGG	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA,NA	NA|342aa|up_9|NC_014962.1_1650873_1651899_+	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|405aa|up_8|NC_014962.1_1652032_1653247_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|546aa|up_7|NC_014962.1_1653463_1655101_-	cd17534, REC_DC-like, phosphoacceptor receiver (REC) domain of modulated diguanylate cyclase and similar domains	NA|1389aa|up_6|NC_014962.1_1655097_1659264_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|328aa|up_5|NC_014962.1_1659730_1660714_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|258aa|up_4|NC_014962.1_1660823_1661597_+	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|1097aa|up_3|NC_014962.1_1662049_1665340_+	pfam07583, PSCyt2, Protein of unknown function (DUF1549)	NA|506aa|up_2|NC_014962.1_1665388_1666906_+	pfam07394, DUF1501, Protein of unknown function (DUF1501)	NA|239aa|up_1|NC_014962.1_1667234_1667951_-	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|653aa|up_0|NC_014962.1_1668078_1670037_-	sd00006, TPR, Tetratricopeptide repeat	NA|436aa|down_0|NC_014962.1_1672866_1674174_-	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins	NA|1305aa|down_1|NC_014962.1_1674326_1678241_+	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|280aa|down_2|NC_014962.1_1678513_1679353_+	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold	NA|383aa|down_3|NC_014962.1_1679300_1680449_+	TIGR03699, menaquin_MqnC, dehypoxanthine futalosine cyclase	NA|228aa|down_4|NC_014962.1_1680653_1681337_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|123aa|down_5|NC_014962.1_1681494_1681863_+	pfam14883, GHL13, Hypothetical glycosyl hydrolase family 13	NA|254aa|down_6|NC_014962.1_1681980_1682742_+	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family	NA|265aa|down_7|NC_014962.1_1682808_1683603_+	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase	NA|160aa|down_8|NC_014962.1_1683709_1684189_-	pfam02635, DrsE, DsrE/DsrF-like family	NA|715aa|down_9|NC_014962.1_1684570_1686715_+	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	3	1702067-1702156	2	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	CTTCAATCGCCCGGTGGATCGCCGCC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|237aa|up_7|NC_014962.1_1690705_1691416_+,NA|293aa|up_5|NC_014962.1_1692609_1693488_+,NA	NA|183aa|up_9|NC_014962.1_1688534_1689083_+	pfam02622, DUF179, Uncharacterized ACR, COG1678	NA|385aa|up_8|NC_014962.1_1689192_1690347_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|237aa|up_7|NC_014962.1_1690705_1691416_+	NA	NA|306aa|up_6|NC_014962.1_1691489_1692407_+	PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed	NA|293aa|up_5|NC_014962.1_1692609_1693488_+	NA	NA|624aa|up_4|NC_014962.1_1693637_1695509_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|497aa|up_3|NC_014962.1_1696448_1697939_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|224aa|up_2|NC_014962.1_1698028_1698700_-	pfam00498, FHA, FHA domain	NA|595aa|up_1|NC_014962.1_1699331_1701116_+	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed	NA|240aa|up_0|NC_014962.1_1701218_1701938_-	PRK08317, PRK08317, hypothetical protein; Provisional	NA|157aa|down_0|NC_014962.1_1703102_1703573_-	PRK05302, PRK05302, 30S ribosomal protein S7; Validated	NA|136aa|down_1|NC_014962.1_1703817_1704225_-	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|361aa|down_2|NC_014962.1_1704404_1705487_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|295aa|down_3|NC_014962.1_1705781_1706666_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|822aa|down_4|NC_014962.1_1707277_1709743_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|406aa|down_5|NC_014962.1_1709984_1711202_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|647aa|down_6|NC_014962.1_1711198_1713139_-	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|478aa|down_7|NC_014962.1_1713299_1714733_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|584aa|down_8|NC_014962.1_1714832_1716584_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|149aa|down_9|NC_014962.1_1716810_1717257_-	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	4	2391410-2391486	3	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	TCCGCCGGCTTGTCCTGGTCGGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|60aa|up_8|NC_014962.1_2374696_2374876_+,NA|143aa|up_7|NC_014962.1_2374878_2375307_+,NA|389aa|down_7|NC_014962.1_2409743_2410910_-	NA|445aa|up_9|NC_014962.1_2373297_2374632_+	cd00958, DhnA, Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs)	NA|60aa|up_8|NC_014962.1_2374696_2374876_+	NA	NA|143aa|up_7|NC_014962.1_2374878_2375307_+	NA	NA|802aa|up_6|NC_014962.1_2375852_2378258_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|823aa|up_5|NC_014962.1_2378497_2380966_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|443aa|up_4|NC_014962.1_2381521_2382850_+	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|477aa|up_3|NC_014962.1_2383077_2384508_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|152aa|up_2|NC_014962.1_2384706_2385162_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|498aa|up_1|NC_014962.1_2385553_2387047_-	pfam07607, DUF1570, Protein of unknown function (DUF1570)	NA|125aa|up_0|NC_014962.1_2387205_2387580_-	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2	NA|707aa|down_0|NC_014962.1_2392124_2394245_-	PRK00007, PRK00007, elongation factor G; Reviewed	NA|287aa|down_1|NC_014962.1_2394488_2395349_-	pfam04098, Rad52_Rad22, Rad52/22 family double-strand break repair protein	NA|415aa|down_2|NC_014962.1_2395629_2396874_-	pfam10128, OpcA_G6PD_assem, Glucose-6-phosphate dehydrogenase subunit	NA|664aa|down_3|NC_014962.1_2396907_2398899_-	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement	NA|118aa|down_4|NC_014962.1_2399463_2399817_+	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|890aa|down_5|NC_014962.1_2400200_2402870_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|1901aa|down_6|NC_014962.1_2403900_2409603_+	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|389aa|down_7|NC_014962.1_2409743_2410910_-	NA	NA|293aa|down_8|NC_014962.1_2411515_2412394_+	PRK11340, PRK11340, phosphodiesterase YaeI; Provisional	NA|1218aa|down_9|NC_014962.1_2412556_2416210_-	cd06241, M14-like, Peptidase M14-like domain; uncharacterized subgroup
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	5	2550123-2550219	4	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	CGAACTCCCTACACCTACTACCAACTCCCCGTACT	35	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|188aa|up_8|NC_014962.1_2535296_2535860_-,NA|72aa|up_3|NC_014962.1_2545907_2546123_+,NA|253aa|down_1|NC_014962.1_2553106_2553865_-,NA|252aa|down_4|NC_014962.1_2557238_2557994_+,NA|197aa|down_7|NC_014962.1_2562730_2563321_+	NA|421aa|up_9|NC_014962.1_2533927_2535190_-	TIGR03472, HpnI, hopanoid biosynthesis associated glycosyl transferase protein HpnI	NA|188aa|up_8|NC_014962.1_2535296_2535860_-	NA	NA|878aa|up_7|NC_014962.1_2536047_2538681_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|309aa|up_6|NC_014962.1_2539465_2540392_+	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein	NA|738aa|up_5|NC_014962.1_2540623_2542837_+	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]	NA|921aa|up_4|NC_014962.1_2542971_2545734_-	TIGR03806, chp_HNE_0200, conserved hypothetical protein, HNE_0200 family	NA|72aa|up_3|NC_014962.1_2545907_2546123_+	NA	NA|281aa|up_2|NC_014962.1_2546336_2547179_+	pfam02405, MlaE, Permease MlaE	NA|314aa|up_1|NC_014962.1_2547183_2548125_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|373aa|up_0|NC_014962.1_2548278_2549397_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|285aa|down_0|NC_014962.1_2552258_2553113_+	cd07393, MPP_DR1119, Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain	NA|253aa|down_1|NC_014962.1_2553106_2553865_-	NA	NA|693aa|down_2|NC_014962.1_2553790_2555869_+	COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]	NA|404aa|down_3|NC_014962.1_2556030_2557242_+	COG4637, COG4637, Predicted ATPase [General function prediction only]	NA|252aa|down_4|NC_014962.1_2557238_2557994_+	NA	NA|699aa|down_5|NC_014962.1_2558053_2560150_-	PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein	NA|677aa|down_6|NC_014962.1_2560335_2562366_-	PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein	NA|197aa|down_7|NC_014962.1_2562730_2563321_+	NA	NA|362aa|down_8|NC_014962.1_2563432_2564518_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|449aa|down_9|NC_014962.1_2564514_2565861_+	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	6	2867064-2867174	5	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	AGGTCGGAGTTGTCCACGTCGCCGTCG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|113aa|up_8|NC_014962.1_2854599_2854938_+,NA|75aa|down_5|NC_014962.1_2882054_2882279_-,NA|455aa|down_9|NC_014962.1_2885697_2887062_+	NA|125aa|up_9|NC_014962.1_2853963_2854338_-	pfam02617, ClpS, ATP-dependent Clp protease adaptor protein ClpS	NA|113aa|up_8|NC_014962.1_2854599_2854938_+	NA	NA|477aa|up_7|NC_014962.1_2854934_2856365_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|367aa|up_6|NC_014962.1_2856551_2857652_-	PRK09354, recA, recombinase A; Provisional	NA|335aa|up_5|NC_014962.1_2858169_2859174_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|843aa|up_4|NC_014962.1_2859297_2861826_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|299aa|up_3|NC_014962.1_2861822_2862719_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|592aa|up_2|NC_014962.1_2862786_2864562_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|457aa|up_1|NC_014962.1_2865068_2866439_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|142aa|up_0|NC_014962.1_2866478_2866904_+	cd06664, IscU_like, Iron-sulfur cluster scaffold-like proteins	NA|342aa|down_0|NC_014962.1_2871958_2872984_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|1184aa|down_1|NC_014962.1_2873364_2876916_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|399aa|down_2|NC_014962.1_2877592_2878789_+	pfam07610, DUF1573, Protein of unknown function (DUF1573)	NA|388aa|down_3|NC_014962.1_2878931_2880095_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|343aa|down_4|NC_014962.1_2880878_2881907_+	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|75aa|down_5|NC_014962.1_2882054_2882279_-	NA	NA|193aa|down_6|NC_014962.1_2882277_2882856_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|247aa|down_7|NC_014962.1_2882932_2883673_+	pfam04493, Endonuclease_5, Endonuclease V	NA|498aa|down_8|NC_014962.1_2883827_2885321_-	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase	NA|455aa|down_9|NC_014962.1_2885697_2887062_+	NA
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	7	3137584-3137769	1	PILER-CR	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	CGCGCTTGAGCCATCGTGGGTTGAATCGGTTCAGAGGTTGAA	42	0	0	NA	NA	NA	2	2	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA,NA	NA|295aa|up_9|NC_014962.1_3124349_3125234_-	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|283aa|up_8|NC_014962.1_3125578_3126427_+	pfam00149, Metallophos, Calcineurin-like phosphoesterase	NA|428aa|up_7|NC_014962.1_3126380_3127664_+	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P	NA|193aa|up_6|NC_014962.1_3127754_3128333_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|452aa|up_5|NC_014962.1_3128409_3129765_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|267aa|up_4|NC_014962.1_3129839_3130640_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|508aa|up_3|NC_014962.1_3130746_3132270_+	COG4745, COG4745, Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|86aa|up_2|NC_014962.1_3132279_3132537_-	cd02066, GRX_family, Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain	NA|969aa|up_1|NC_014962.1_3133272_3136179_-	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only]	NA|253aa|up_0|NC_014962.1_3136714_3137473_-	pfam04476, 4HFCP_synth, 4-HFC-P synthase	NA|253aa|down_0|NC_014962.1_3137968_3138727_-	pfam06439, DUF1080, Domain of Unknown Function (DUF1080)	NA|458aa|down_1|NC_014962.1_3139958_3141332_+	COG1397, DraG, ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]	NA|546aa|down_2|NC_014962.1_3168887_3170525_-	pfam12831, FAD_oxidored, FAD dependent oxidoreductase	NA|431aa|down_3|NC_014962.1_3170647_3171940_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|580aa|down_4|NC_014962.1_3172893_3174633_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|835aa|down_5|NC_014962.1_3175045_3177550_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|305aa|down_6|NC_014962.1_3177905_3178820_-	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]	NA|739aa|down_7|NC_014962.1_3179146_3181363_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|326aa|down_8|NC_014962.1_3182160_3183138_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|242aa|down_9|NC_014962.1_3183498_3184224_+	pfam03793, PASTA, PASTA domain
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	8	3141389-3167461	2,2,6,3,4	CRT,PILER-CR,CRISPRCasFinder,PILER-CR,PILER-CR	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	GCTTCAATGGGGCCGCGTCGTTGAGGACGCGGAAAC,GCTTCAATGGGGCCGCGTCGTTGAGGACGCGGAAAC,GCTTCAATGGGGCCGCGTCGTTGAGGACGCGGAAAC,GCTTCAATGGGGCCGCGTCGTTGAGGACGCGGAAAC,GCTTCAATGGGGCCGCGTCGTTGAGGACGCGGAAAC	36,36,36,36,36	0	0	NA	NA	NA:NA:NA:NA:NA	360,357,359,357,357	360	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA,NA	NA|428aa|up_9|NC_014962.1_3126380_3127664_+	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P	NA|193aa|up_8|NC_014962.1_3127754_3128333_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|452aa|up_7|NC_014962.1_3128409_3129765_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|267aa|up_6|NC_014962.1_3129839_3130640_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|508aa|up_5|NC_014962.1_3130746_3132270_+	COG4745, COG4745, Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|86aa|up_4|NC_014962.1_3132279_3132537_-	cd02066, GRX_family, Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain	NA|969aa|up_3|NC_014962.1_3133272_3136179_-	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only]	NA|253aa|up_2|NC_014962.1_3136714_3137473_-	pfam04476, 4HFCP_synth, 4-HFC-P synthase	NA|253aa|up_1|NC_014962.1_3137968_3138727_-	pfam06439, DUF1080, Domain of Unknown Function (DUF1080)	NA|458aa|up_0|NC_014962.1_3139958_3141332_+	COG1397, DraG, ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]	NA|546aa|down_0|NC_014962.1_3168887_3170525_-	pfam12831, FAD_oxidored, FAD dependent oxidoreductase	NA|431aa|down_1|NC_014962.1_3170647_3171940_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|580aa|down_2|NC_014962.1_3172893_3174633_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|835aa|down_3|NC_014962.1_3175045_3177550_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|305aa|down_4|NC_014962.1_3177905_3178820_-	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]	NA|739aa|down_5|NC_014962.1_3179146_3181363_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|326aa|down_6|NC_014962.1_3182160_3183138_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|242aa|down_7|NC_014962.1_3183498_3184224_+	pfam03793, PASTA, PASTA domain	NA|1761aa|down_8|NC_014962.1_3184357_3189640_+	sd00037, PASTA, PASTA domain	NA|426aa|down_9|NC_014962.1_3189945_3191223_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	9	3422317-3422437	7	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	ACCCCACACCTCACTCCCCACACCCCACTCCCCACTCCCCACTCC	45	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|908aa|up_6|NC_014962.1_3410476_3413200_-,NA|243aa|up_2|NC_014962.1_3418390_3419119_+,NA|661aa|up_0|NC_014962.1_3420038_3422021_+,NA|475aa|down_1|NC_014962.1_3424101_3425526_+,NA|542aa|down_6|NC_014962.1_3432730_3434356_+,NA|125aa|down_7|NC_014962.1_3434729_3435104_+	NA|462aa|up_9|NC_014962.1_3405855_3407241_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|478aa|up_8|NC_014962.1_3407243_3408677_+	PRK03854, opgC, glucans biosynthesis protein MdoC	NA|397aa|up_7|NC_014962.1_3409169_3410360_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|908aa|up_6|NC_014962.1_3410476_3413200_-	NA	NA|421aa|up_5|NC_014962.1_3413461_3414724_-	pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase, N-terminal	NA|619aa|up_4|NC_014962.1_3415134_3416991_-	pfam07510, DUF1524, Protein of unknown function (DUF1524)	NA|219aa|up_3|NC_014962.1_3417654_3418311_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|243aa|up_2|NC_014962.1_3418390_3419119_+	NA	NA|308aa|up_1|NC_014962.1_3419115_3420039_+	pfam13490, zf-HC2, Putative zinc-finger	NA|661aa|up_0|NC_014962.1_3420038_3422021_+	NA	NA|474aa|down_0|NC_014962.1_3422653_3424075_+	PRK05769, PRK05769, acetyl ornithine aminotransferase family protein	NA|475aa|down_1|NC_014962.1_3424101_3425526_+	NA	NA|500aa|down_2|NC_014962.1_3426014_3427514_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|913aa|down_3|NC_014962.1_3427546_3430285_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|306aa|down_4|NC_014962.1_3430488_3431406_+	pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA)	NA|240aa|down_5|NC_014962.1_3431602_3432322_-	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC	NA|542aa|down_6|NC_014962.1_3432730_3434356_+	NA	NA|125aa|down_7|NC_014962.1_3434729_3435104_+	NA	NA|652aa|down_8|NC_014962.1_3435100_3437056_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|160aa|down_9|NC_014962.1_3437052_3437532_+	pfam14478, DUF4430, Domain of unknown function (DUF4430)
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	10	4633593-4633715	8	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	CCACTGAGACCCGTCAAGGCGTCCAACAAGTCGTCGAGT	39	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|154aa|up_3|NC_014962.1_4624165_4624627_-,NA|600aa|down_0|NC_014962.1_4634790_4636590_+	NA|168aa|up_9|NC_014962.1_4612977_4613481_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|134aa|up_8|NC_014962.1_4613672_4614074_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|598aa|up_7|NC_014962.1_4614418_4616212_-	COG0029, NadB, Aspartate oxidase [Coenzyme metabolism]	NA|1646aa|up_6|NC_014962.1_4616480_4621418_-	PTZ00121, PTZ00121, MAEBL; Provisional	NA|349aa|up_5|NC_014962.1_4621895_4622942_+	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|317aa|up_4|NC_014962.1_4622969_4623920_-	pfam13847, Methyltransf_31, Methyltransferase domain	NA|154aa|up_3|NC_014962.1_4624165_4624627_-	NA	NA|376aa|up_2|NC_014962.1_4626468_4627596_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|452aa|up_1|NC_014962.1_4627873_4629229_-	pfam07586, HXXSHH, Protein of unknown function (DUF1552)	NA|822aa|up_0|NC_014962.1_4629369_4631835_-	pfam07631, PSD4, Protein of unknown function (DUF1592)	NA|600aa|down_0|NC_014962.1_4634790_4636590_+	NA	NA|1316aa|down_1|NC_014962.1_4637161_4641109_+	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|425aa|down_2|NC_014962.1_4641415_4642690_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|262aa|down_3|NC_014962.1_4642893_4643679_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|160aa|down_4|NC_014962.1_4643819_4644299_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|365aa|down_5|NC_014962.1_4644295_4645390_+	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|253aa|down_6|NC_014962.1_4645905_4646664_+	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|259aa|down_7|NC_014962.1_4646902_4647679_+	PRK06732, PRK06732, phosphopantothenate--cysteine ligase; Validated	NA|214aa|down_8|NC_014962.1_4647768_4648410_-	COG4566, TtrR, Response regulator [Signal transduction mechanisms]	NA|1262aa|down_9|NC_014962.1_4648540_4652326_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	11	4741736-4741814	9	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	GGCAACGATACCATCCTCGGCGGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA,NA|479aa|down_1|NC_014962.1_4748193_4749630_-,NA|708aa|down_2|NC_014962.1_4749919_4752043_+,NA|284aa|down_3|NC_014962.1_4752440_4753292_+,NA|165aa|down_8|NC_014962.1_4758487_4758982_+	NA|521aa|up_9|NC_014962.1_4723138_4724701_+	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS	NA|676aa|up_8|NC_014962.1_4725279_4727307_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|444aa|up_7|NC_014962.1_4727335_4728667_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|241aa|up_6|NC_014962.1_4728689_4729412_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|489aa|up_5|NC_014962.1_4729546_4731013_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|480aa|up_4|NC_014962.1_4731162_4732602_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|379aa|up_3|NC_014962.1_4732787_4733924_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|275aa|up_2|NC_014962.1_4734279_4735104_-	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|292aa|up_1|NC_014962.1_4735570_4736446_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|1327aa|up_0|NC_014962.1_4736429_4740410_-	pfam13424, TPR_12, Tetratricopeptide repeat	NA|202aa|down_0|NC_014962.1_4747433_4748039_-	pfam12766, Pyridox_oxase_2, Pyridoxamine 5'-phosphate oxidase	NA|479aa|down_1|NC_014962.1_4748193_4749630_-	NA	NA|708aa|down_2|NC_014962.1_4749919_4752043_+	NA	NA|284aa|down_3|NC_014962.1_4752440_4753292_+	NA	NA|315aa|down_4|NC_014962.1_4753503_4754448_-	pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases acyltransferase (catalytic domain)	NA|326aa|down_5|NC_014962.1_4754737_4755715_+	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase	NA|512aa|down_6|NC_014962.1_4755813_4757349_+	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional	NA|316aa|down_7|NC_014962.1_4757353_4758301_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|165aa|down_8|NC_014962.1_4758487_4758982_+	NA	NA|1531aa|down_9|NC_014962.1_4759154_4763747_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	12	4741898-4742297	10	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	GGCAACGATACCATCCTCGGCGGC	24	1	1	4742243-4742272	NC_014962.1_4742270-4742299	NA	6	6	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA,NA|479aa|down_1|NC_014962.1_4748193_4749630_-,NA|708aa|down_2|NC_014962.1_4749919_4752043_+,NA|284aa|down_3|NC_014962.1_4752440_4753292_+,NA|165aa|down_8|NC_014962.1_4758487_4758982_+	NA|521aa|up_9|NC_014962.1_4723138_4724701_+	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS	NA|676aa|up_8|NC_014962.1_4725279_4727307_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|444aa|up_7|NC_014962.1_4727335_4728667_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|241aa|up_6|NC_014962.1_4728689_4729412_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|489aa|up_5|NC_014962.1_4729546_4731013_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|480aa|up_4|NC_014962.1_4731162_4732602_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|379aa|up_3|NC_014962.1_4732787_4733924_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|275aa|up_2|NC_014962.1_4734279_4735104_-	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|292aa|up_1|NC_014962.1_4735570_4736446_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|1327aa|up_0|NC_014962.1_4736429_4740410_-	pfam13424, TPR_12, Tetratricopeptide repeat	NA|202aa|down_0|NC_014962.1_4747433_4748039_-	pfam12766, Pyridox_oxase_2, Pyridoxamine 5'-phosphate oxidase	NA|479aa|down_1|NC_014962.1_4748193_4749630_-	NA	NA|708aa|down_2|NC_014962.1_4749919_4752043_+	NA	NA|284aa|down_3|NC_014962.1_4752440_4753292_+	NA	NA|315aa|down_4|NC_014962.1_4753503_4754448_-	pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases acyltransferase (catalytic domain)	NA|326aa|down_5|NC_014962.1_4754737_4755715_+	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase	NA|512aa|down_6|NC_014962.1_4755813_4757349_+	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional	NA|316aa|down_7|NC_014962.1_4757353_4758301_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|165aa|down_8|NC_014962.1_4758487_4758982_+	NA	NA|1531aa|down_9|NC_014962.1_4759154_4763747_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000186345.1_ASM18634v1	NC_014962	Isosphaera pallida ATCC 43644, complete sequence	13	4742537-4742695	11	CRISPRCasFinder	no		csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	Orphan	GGCAACGATACCATCCTCGGCGGC	24	0	0	NA	NA	NA	2	2	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA,NA|479aa|down_1|NC_014962.1_4748193_4749630_-,NA|708aa|down_2|NC_014962.1_4749919_4752043_+,NA|284aa|down_3|NC_014962.1_4752440_4753292_+,NA|165aa|down_8|NC_014962.1_4758487_4758982_+	NA|521aa|up_9|NC_014962.1_4723138_4724701_+	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS	NA|676aa|up_8|NC_014962.1_4725279_4727307_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|444aa|up_7|NC_014962.1_4727335_4728667_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|241aa|up_6|NC_014962.1_4728689_4729412_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|489aa|up_5|NC_014962.1_4729546_4731013_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|480aa|up_4|NC_014962.1_4731162_4732602_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|379aa|up_3|NC_014962.1_4732787_4733924_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|275aa|up_2|NC_014962.1_4734279_4735104_-	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|292aa|up_1|NC_014962.1_4735570_4736446_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|1327aa|up_0|NC_014962.1_4736429_4740410_-	pfam13424, TPR_12, Tetratricopeptide repeat	NA|202aa|down_0|NC_014962.1_4747433_4748039_-	pfam12766, Pyridox_oxase_2, Pyridoxamine 5'-phosphate oxidase	NA|479aa|down_1|NC_014962.1_4748193_4749630_-	NA	NA|708aa|down_2|NC_014962.1_4749919_4752043_+	NA	NA|284aa|down_3|NC_014962.1_4752440_4753292_+	NA	NA|315aa|down_4|NC_014962.1_4753503_4754448_-	pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases acyltransferase (catalytic domain)	NA|326aa|down_5|NC_014962.1_4754737_4755715_+	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase	NA|512aa|down_6|NC_014962.1_4755813_4757349_+	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional	NA|316aa|down_7|NC_014962.1_4757353_4758301_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|165aa|down_8|NC_014962.1_4758487_4758982_+	NA	NA|1531aa|down_9|NC_014962.1_4759154_4763747_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000186345.1_ASM18634v1	NC_014957	Isosphaera pallida ATCC 43644 plasmid pISOP01, complete sequence	1	47067-49232	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no			Orphan	GTTCCGCACCCCTCCGGGGGTGCGGCACCATTGAAAC,GTTCCGCACCCCTCCGGGGGTGCGGCACCATTGAAAC,GTTCCGCACCCCTCCGGGGGTGCGGCACCATTGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	29,29,29	29	Orphan	csa3,cas1,cas2,csb2gr5,cas3,Cas9_archaeal,DinG,cas8u1,cas7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cmr1gr7,csm6,csx15,csx1	NA|520aa|up_2|NC_014957.1_40782_42342_+,NA	NA|293aa|up_9|NC_014957.1_27247_28126_+	pfam11984, DUF3485, Protein of unknown function (DUF3485)	NA|930aa|up_8|NC_014957.1_28147_30937_+	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|355aa|up_7|NC_014957.1_30933_31998_+	pfam09721, Exosortase_EpsH, Transmembrane exosortase (Exosortase_EpsH)	NA|1635aa|up_6|NC_014957.1_32240_37145_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|215aa|up_5|NC_014957.1_37259_37904_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|322aa|up_4|NC_014957.1_38600_39566_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|224aa|up_3|NC_014957.1_39647_40319_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|520aa|up_2|NC_014957.1_40782_42342_+	NA	NA|457aa|up_1|NC_014957.1_42786_44157_-	pfam10134, RPA, Replication initiator protein A	NA|480aa|up_0|NC_014957.1_45211_46651_+	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|214aa|down_0|NC_014957.1_49537_50179_-	pfam02599, CsrA, Global regulator protein family	NA|522aa|down_1|NC_014957.1_50683_52249_-	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|219aa|down_2|NC_014957.1_52441_53098_-	PHA03269, PHA03269, envelope glycoprotein C; Provisional	NA|343aa|down_3|NC_014957.1_53222_54251_-	pfam13614, AAA_31, AAA domain	NA|392aa|down_4|NC_014957.1_54989_56165_+	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
