assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000185965.1_ASM18596v1	NC_014924	Pseudoxanthomonas suwonensis 11-1, complete sequence	1	414010-414122	1	CRISPRCasFinder	no		WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	Orphan	CATTATGAGTGCTGTGCTCTAACCGGCTGAGCTACATAGCC	41	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	NA,NA|243aa|down_6|NC_014924.1_421311_422040_+	NA|822aa|up_9|NC_014924.1_401359_403825_+	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|122aa|up_8|NC_014924.1_403826_404192_+	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain	NA|927aa|up_7|NC_014924.1_404191_406972_+	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|248aa|up_6|NC_014924.1_407047_407791_+	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|58aa|up_5|NC_014924.1_407931_408105_+	pfam06796, NapE, Periplasmic nitrate reductase protein NapE	NA|166aa|up_4|NC_014924.1_408107_408605_+	cd10564, NapF_like, NapF, iron-sulfur subunit of periplasmic nitrate reductase	NA|102aa|up_3|NC_014924.1_408601_408907_+	pfam03927, NapD, NapD protein	NA|832aa|up_2|NC_014924.1_408903_411399_+	PRK13532, PRK13532, nitrate reductase catalytic subunit NapA	NA|157aa|up_1|NC_014924.1_411523_411994_+	pfam03892, NapB, Nitrate reductase cytochrome c-type subunit (NapB)	NA|200aa|up_0|NC_014924.1_411994_412594_+	TIGR02161, Cytochrome_c-type_protein_NapC, periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family	NA|200aa|down_0|NC_014924.1_414283_414883_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|66aa|down_1|NC_014924.1_414972_415170_+	cd19945, Fer2_BFD, bacterioferritin-associated ferredoxin (BFD) [2Fe-2S]-binding domain	NA|157aa|down_2|NC_014924.1_415276_415747_+	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain	NA|138aa|down_3|NC_014924.1_415719_416133_-	pfam01627, Hpt, Hpt domain	NA|635aa|down_4|NC_014924.1_418616_420521_-	cd01948, EAL, EAL domain	NA|195aa|down_5|NC_014924.1_420599_421184_-	pfam13548, DUF4126, Domain of unknown function (DUF4126)	NA|243aa|down_6|NC_014924.1_421311_422040_+	NA	NA|163aa|down_7|NC_014924.1_422042_422531_+	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|123aa|down_8|NC_014924.1_422562_422931_+	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional	NA|297aa|down_9|NC_014924.1_422975_423866_+	COG2816, NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding [DNA replication, recombination, and repair]
GCF_000185965.1_ASM18596v1	NC_014924	Pseudoxanthomonas suwonensis 11-1, complete sequence	2	2402024-2402130	2	CRISPRCasFinder	no		WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	Orphan	AAAACCGGGGTCAGAGTGCGATTT	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	NA|78aa|up_4|NC_014924.1_2394978_2395212_-,NA|103aa|down_2|NC_014924.1_2403314_2403623_-,NA|163aa|down_6|NC_014924.1_2407059_2407548_-	NA|174aa|up_9|NC_014924.1_2389381_2389903_-	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|169aa|up_8|NC_014924.1_2390135_2390642_+	cd07909, YciF, YciF bacterial stress response protein, ferritin-like iron-binding domain	NA|210aa|up_7|NC_014924.1_2390764_2391394_+	pfam13628, DUF4142, Domain of unknown function (DUF4142)	NA|75aa|up_6|NC_014924.1_2392052_2392277_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|477aa|up_5|NC_014924.1_2393465_2394896_-	PRK10504, PRK10504, putative transporter; Provisional	NA|78aa|up_4|NC_014924.1_2394978_2395212_-	NA	NA|448aa|up_3|NC_014924.1_2395769_2397113_-	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|554aa|up_2|NC_014924.1_2397875_2399537_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|504aa|up_1|NC_014924.1_2399523_2401035_-	PRK09302, PRK09302, circadian clock protein KaiC; Reviewed	NA|254aa|up_0|NC_014924.1_2401245_2402007_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|193aa|down_0|NC_014924.1_2402137_2402716_-	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|110aa|down_1|NC_014924.1_2402854_2403184_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|103aa|down_2|NC_014924.1_2403314_2403623_-	NA	NA|149aa|down_3|NC_014924.1_2404063_2404510_+	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins	NA|313aa|down_4|NC_014924.1_2404506_2405445_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|186aa|down_5|NC_014924.1_2406326_2406884_-	pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)	NA|163aa|down_6|NC_014924.1_2407059_2407548_-	NA	NA|141aa|down_7|NC_014924.1_2408498_2408921_+	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]	NA|447aa|down_8|NC_014924.1_2408917_2410258_+	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|401aa|down_9|NC_014924.1_2410269_2411472_+	pfam15515, MvaI_BcnI, MvaI/BcnI restriction endonuclease family
GCF_000185965.1_ASM18596v1	NC_014924	Pseudoxanthomonas suwonensis 11-1, complete sequence	3	2405447-2405602	3	CRISPRCasFinder	no		WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	Orphan	ACCGGCCCACCGCCGAAAACCGGGGTCAGAGTGCAATTTCGTAGCGATGCTT	52	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	NA|78aa|up_9|NC_014924.1_2394978_2395212_-,NA|103aa|up_2|NC_014924.1_2403314_2403623_-,NA|163aa|down_1|NC_014924.1_2407059_2407548_-,NA|514aa|down_5|NC_014924.1_2411873_2413415_-	NA|78aa|up_9|NC_014924.1_2394978_2395212_-	NA	NA|448aa|up_8|NC_014924.1_2395769_2397113_-	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|554aa|up_7|NC_014924.1_2397875_2399537_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|504aa|up_6|NC_014924.1_2399523_2401035_-	PRK09302, PRK09302, circadian clock protein KaiC; Reviewed	NA|254aa|up_5|NC_014924.1_2401245_2402007_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|193aa|up_4|NC_014924.1_2402137_2402716_-	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|110aa|up_3|NC_014924.1_2402854_2403184_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|103aa|up_2|NC_014924.1_2403314_2403623_-	NA	NA|149aa|up_1|NC_014924.1_2404063_2404510_+	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins	NA|313aa|up_0|NC_014924.1_2404506_2405445_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|186aa|down_0|NC_014924.1_2406326_2406884_-	pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)	NA|163aa|down_1|NC_014924.1_2407059_2407548_-	NA	NA|141aa|down_2|NC_014924.1_2408498_2408921_+	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]	NA|447aa|down_3|NC_014924.1_2408917_2410258_+	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|401aa|down_4|NC_014924.1_2410269_2411472_+	pfam15515, MvaI_BcnI, MvaI/BcnI restriction endonuclease family	NA|514aa|down_5|NC_014924.1_2411873_2413415_-	NA	NA|401aa|down_6|NC_014924.1_2413539_2414742_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|372aa|down_7|NC_014924.1_2414751_2415867_-	pfam09369, DUF1998, Domain of unknown function (DUF1998)	NA|1043aa|down_8|NC_014924.1_2416573_2419702_-	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins	NA|542aa|down_9|NC_014924.1_2419706_2421332_-	pfam08378, NERD, Nuclease-related domain
GCF_000185965.1_ASM18596v1	NC_014924	Pseudoxanthomonas suwonensis 11-1, complete sequence	4	2518299-2518431	4	CRISPRCasFinder	no		WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	Orphan	AAAACCGGGGTCAGAGTGGGATTTC	25	0	0	NA	NA	NA	2	2	Orphan	WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	NA,NA|163aa|down_9|NC_014924.1_2526863_2527352_-	NA|131aa|up_9|NC_014924.1_2507296_2507689_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|370aa|up_8|NC_014924.1_2507925_2509035_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|340aa|up_7|NC_014924.1_2509337_2510357_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|680aa|up_6|NC_014924.1_2510432_2512472_+	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|152aa|up_5|NC_014924.1_2512908_2513364_+	pfam07486, Hydrolase_2, Cell Wall Hydrolase	NA|204aa|up_4|NC_014924.1_2513404_2514016_+	PRK10542, PRK10542, glutathionine S-transferase; Provisional	NA|187aa|up_3|NC_014924.1_2514069_2514630_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|387aa|up_2|NC_014924.1_2514669_2515830_-	PRK12351, PRK12351, methylcitrate synthase; Provisional	NA|295aa|up_1|NC_014924.1_2515882_2516767_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|409aa|up_0|NC_014924.1_2517067_2518294_+	cd06102, citrate_synt_like_2, Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle)	NA|639aa|down_0|NC_014924.1_2518502_2520419_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|288aa|down_1|NC_014924.1_2520405_2521269_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|344aa|down_2|NC_014924.1_2521252_2522284_-	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains	NA|133aa|down_3|NC_014924.1_2522274_2522673_-	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains	NA|122aa|down_4|NC_014924.1_2522669_2523035_-	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation	NA|284aa|down_5|NC_014924.1_2523034_2523886_-	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation	NA|328aa|down_6|NC_014924.1_2524317_2525301_+	cd18618, GH43_Xsa43E-like, Glycosyl hydrolase family 43, including Butyrivibrio proteoclasticus arabinofuranosidase Xsa43E	NA|138aa|down_7|NC_014924.1_2525458_2525872_-	pfam14078, DUF4259, Domain of unknown function (DUF4259)	NA|245aa|down_8|NC_014924.1_2525930_2526665_-	pfam05076, SUFU, Suppressor of fused protein (SUFU)	NA|163aa|down_9|NC_014924.1_2526863_2527352_-	NA
GCF_000185965.1_ASM18596v1	NC_014924	Pseudoxanthomonas suwonensis 11-1, complete sequence	5	2839966-2840129	5	CRISPRCasFinder	no		WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	Orphan	AAAACCGGGGTCAGAGTGCAATTTC	25	0	0	NA	NA	NA	2	2	Orphan	WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	NA|129aa|up_7|NC_014924.1_2833591_2833978_-,NA|234aa|up_6|NC_014924.1_2834067_2834769_-,NA|250aa|up_2|NC_014924.1_2837602_2838352_+,NA|235aa|up_0|NC_014924.1_2838909_2839614_-,NA|167aa|down_3|NC_014924.1_2844703_2845204_-,NA|234aa|down_9|NC_014924.1_2850877_2851579_+	NA|329aa|up_9|NC_014924.1_2832076_2833063_-	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|118aa|up_8|NC_014924.1_2833166_2833520_-	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|129aa|up_7|NC_014924.1_2833591_2833978_-	NA	NA|234aa|up_6|NC_014924.1_2834067_2834769_-	NA	NA|144aa|up_5|NC_014924.1_2834829_2835261_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|438aa|up_4|NC_014924.1_2835366_2836680_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|133aa|up_3|NC_014924.1_2837126_2837525_+	pfam12120, Arr-ms, Rifampin ADP-ribosyl transferase	NA|250aa|up_2|NC_014924.1_2837602_2838352_+	NA	NA|145aa|up_1|NC_014924.1_2838359_2838794_-	pfam12893, Lumazine_bd_2, Putative lumazine-binding	NA|235aa|up_0|NC_014924.1_2838909_2839614_-	NA	NA|432aa|down_0|NC_014924.1_2840309_2841605_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|370aa|down_1|NC_014924.1_2841776_2842886_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|550aa|down_2|NC_014924.1_2842898_2844548_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|167aa|down_3|NC_014924.1_2844703_2845204_-	NA	NA|157aa|down_4|NC_014924.1_2845353_2845824_-	pfam11008, DUF2846, Protein of unknown function (DUF2846)	NA|307aa|down_5|NC_014924.1_2845969_2846890_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|174aa|down_6|NC_014924.1_2847066_2847588_-	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|415aa|down_7|NC_014924.1_2848211_2849456_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|150aa|down_8|NC_014924.1_2850233_2850683_-	pfam14366, DUF4410, Domain of unknown function (DUF4410)	NA|234aa|down_9|NC_014924.1_2850877_2851579_+	NA
GCF_000185965.1_ASM18596v1	NC_014924	Pseudoxanthomonas suwonensis 11-1, complete sequence	6	3224300-3224485	1	CRT	no		WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	Orphan	TCGAGACCGTCAACGGCG	18	0	0	NA	NA	NA	3	3	Orphan	WYL,DinG,csa3,DEDDh,Cas9_archaeal,cas3	NA|108aa|up_7|NC_014924.1_3216010_3216334_+,NA|299aa|down_8|NC_014924.1_3238221_3239118_-	NA|307aa|up_9|NC_014924.1_3213987_3214908_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|302aa|up_8|NC_014924.1_3214991_3215897_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|108aa|up_7|NC_014924.1_3216010_3216334_+	NA	NA|261aa|up_6|NC_014924.1_3216392_3217175_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|347aa|up_5|NC_014924.1_3217254_3218295_+	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region	NA|484aa|up_4|NC_014924.1_3218367_3219819_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|235aa|up_3|NC_014924.1_3220030_3220735_+	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|107aa|up_2|NC_014924.1_3220816_3221137_+	COG4517, COG4517, Uncharacterized protein conserved in bacteria [Function unknown]	NA|470aa|up_1|NC_014924.1_3221155_3222565_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|404aa|up_0|NC_014924.1_3222684_3223896_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|575aa|down_0|NC_014924.1_3224797_3226522_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|326aa|down_1|NC_014924.1_3232808_3233786_-	COG1648, CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]	NA|285aa|down_2|NC_014924.1_3233852_3234707_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|321aa|down_3|NC_014924.1_3234703_3235666_-	PRK00035, hemH, ferrochelatase; Reviewed	NA|293aa|down_4|NC_014924.1_3235809_3236688_+	cd11524, SYLF, The SYLF domain (also called DUF500), a novel lipid-binding module	NA|72aa|down_5|NC_014924.1_3236776_3236992_+	PRK02958, tatA, Sec-independent protein translocase subunit TatA	NA|153aa|down_6|NC_014924.1_3237013_3237472_+	PRK04654, PRK04654, sec-independent translocase; Provisional	NA|253aa|down_7|NC_014924.1_3237452_3238211_+	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC	NA|299aa|down_8|NC_014924.1_3238221_3239118_-	NA	NA|254aa|down_9|NC_014924.1_3239169_3239931_-	PRK09065, PRK09065, glutamine amidotransferase; Provisional
