The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	266816	273276	2617381		Staphylococcus_phage(50.0%)	8	NA	NA
WP_015728617.1|266816_267248_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	36.1	2.0e-08
WP_015728618.1|267373_268456_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
WP_037543935.1|268580_268829_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1W6JPG8	Staphylococcus_phage	53.1	6.8e-17
WP_015728620.1|268825_269236_+	hypothetical protein	NA	A0A1W6JPJ2	Staphylococcus_phage	41.5	3.0e-25
WP_015728621.1|269521_270457_-	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	76.1	1.7e-124
WP_015728622.1|270747_271446_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_015728623.1|272000_272666_-	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	34.8	1.9e-21
WP_015728624.1|272652_273276_-	deoxynucleoside kinase	NA	S5M586	Bacillus_phage	31.2	1.4e-13
>prophage 2
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	453456	464273	2617381		Salmonella_phage(14.29%)	13	NA	NA
WP_015728730.1|453456_454437_+	glycosyltransferase	NA	A0A192Y8W7	Salmonella_phage	42.4	3.2e-65
WP_014614552.1|454609_454864_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_015728731.1|454933_455533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015728732.1|455680_456394_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	41.8	3.6e-50
WP_015728733.1|456386_456818_-	6-carboxytetrahydropterin synthase QueD	NA	A0A2H4GYB3	Pseudomonas_phage	30.7	8.0e-05
WP_015728734.1|456817_457486_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.1	2.6e-63
WP_015728735.1|457746_458340_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.4	3.5e-35
WP_015728736.1|458323_459472_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	44.8	5.6e-29
WP_015728737.1|459468_460083_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_014614545.1|460091_460301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015728738.1|460311_460995_+	carboxyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_014614543.1|460991_461996_+	biotin-dependent carboxyltransferase family protein	NA	NA	NA	NA	NA
WP_015728739.1|462335_464273_+	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	37.5	9.5e-106
>prophage 3
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	522898	529646	2617381		Streptococcus_phage(33.33%)	6	NA	NA
WP_014614494.1|522898_523831_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.5	3.2e-83
WP_014614493.1|524436_525345_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	33.6	7.3e-08
WP_015728762.1|525346_526342_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.0	5.3e-52
WP_014614491.1|526388_527333_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.6	3.5e-53
WP_015728763.1|528464_529052_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.7	3.1e-52
WP_014614488.1|529148_529646_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	31.7	5.2e-16
>prophage 4
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	542253	557839	2617381	protease,capsid,portal,tail,terminase,head,integrase	Staphylococcus_phage(33.33%)	16	539095:539111	549438:549454
539095:539111	attL	TCAAACCATATTGAATA	NA	NA	NA	NA
WP_015728766.1|542253_544611_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.3	7.8e-94
WP_014614474.1|544626_545091_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	86.4	4.5e-70
WP_015728767.1|545631_546738_-|integrase	site-specific integrase	integrase	A0A1B2AQ00	Phage_Wrath	42.8	8.4e-75
WP_015728768.1|546727_547561_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015728769.1|547740_547959_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015728770.1|547970_548174_+	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	76.1	1.8e-23
WP_015728771.1|548175_548385_+	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	58.8	2.0e-17
WP_015728772.1|548519_548822_+	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	60.0	6.3e-25
WP_015728773.1|548919_551289_+	primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	42.5	1.0e-149
549438:549454	attR	TCAAACCATATTGAATA	NA	NA	NA	NA
WP_015728774.1|551676_552018_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	70.3	5.8e-43
WP_141763232.1|552131_553331_+|portal	phage portal protein	portal	A0A1L2BY94	Clostridium_phage	37.4	1.8e-62
WP_015728776.1|553317_553884_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1B1PA08	Enterococcus_phage	35.4	2.1e-21
WP_015728777.1|553885_555121_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_015728778.1|555180_555462_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0S2GLH6	Bacillus_phage	31.6	4.7e-06
WP_015728780.1|555882_556203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015728781.1|556195_557839_+|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	50.6	3.6e-154
>prophage 5
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	580094	624197	2617381	plate,protease,capsid,portal,tail,holin,terminase,head,integrase	Staphylococcus_phage(93.1%)	65	583245:583263	623742:623760
WP_014614445.1|580094_581336_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	50.1	3.8e-124
WP_014614444.1|581325_581775_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_014614443.1|581872_583270_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
583245:583263	attL	TCGAGATGGAAGGTAGTAT	NA	NA	NA	NA
WP_015728790.1|583337_584387_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A223LI82	Staphylococcus_phage	100.0	1.7e-202
WP_015728791.1|584447_584885_-	hypothetical protein	NA	A0A1J0MFW1	Staphylococcus_phage	95.9	6.9e-73
WP_015728793.1|585076_585781_-	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC5	Staphylococcus_phage	73.9	2.2e-92
WP_015728794.1|585914_586184_+	helix-turn-helix transcriptional regulator	NA	H9A0Y0	Staphylococcus_phage	93.3	1.5e-38
WP_015728795.1|586199_586955_+	oxidoreductase	NA	A0A1J0MFF4	Staphylococcus_phage	98.0	2.0e-136
WP_037543667.1|587133_587397_-	CRISPR-associated protein Cas2	NA	A0A1J0MFM9	Staphylococcus_phage	100.0	1.8e-44
WP_015728796.1|587453_587648_+	hypothetical protein	NA	A0A1J0MFF3	Staphylococcus_phage	100.0	5.7e-19
WP_015728798.1|587917_588145_-	hypothetical protein	NA	A0A223LFH1	Staphylococcus_phage	98.7	7.3e-34
WP_015728800.1|588527_588752_+	hypothetical protein	NA	A0A1J0MG48	Staphylococcus_phage	100.0	6.1e-33
WP_015728801.1|588997_589258_+	DUF1108 family protein	NA	A0A1J0MFD3	Staphylococcus_phage	87.2	2.4e-36
WP_015728802.1|589269_589494_+	hypothetical protein	NA	A0A223LFR3	Staphylococcus_phage	98.6	1.5e-31
WP_015728803.1|589477_589963_+	siphovirus Gp157 family protein	NA	A0A223LGF3	Staphylococcus_phage	97.5	1.1e-79
WP_015728804.1|589963_590632_+	single-stranded DNA-binding protein	NA	A0A1J0MFT8	Staphylococcus_phage	100.0	1.0e-120
WP_015728805.1|590631_591069_+	single-stranded DNA-binding protein	NA	A0A1J0MFL8	Staphylococcus_phage	98.6	2.4e-73
WP_015728807.1|591252_591921_+	hypothetical protein	NA	A0A1J0MFX5	Staphylococcus_phage	95.9	8.6e-123
WP_015728808.1|591917_592631_+	helix-turn-helix domain-containing protein	NA	A0A1J0MGB2	Staphylococcus_phage	97.5	1.7e-116
WP_015728809.1|592640_593414_+	ATP-binding protein	NA	A0A1J0MFK2	Staphylococcus_phage	100.0	8.6e-143
WP_041614780.1|593407_593587_+	hypothetical protein	NA	A0A1J0MFQ5	Staphylococcus_phage	98.3	6.4e-25
WP_041614781.1|593587_594013_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A223LGP3	Staphylococcus_phage	100.0	6.5e-76
WP_015728810.1|594005_594224_+	hypothetical protein	NA	A0A1J0MFH2	Staphylococcus_phage	97.2	5.9e-33
WP_110164998.1|594230_594557_+	hypothetical protein	NA	A0A223LFZ4	Staphylococcus_phage	87.7	1.9e-46
WP_015728812.1|594717_595203_+	DUF3310 domain-containing protein	NA	A0A223LGV5	Staphylococcus_phage	98.8	2.7e-86
WP_015728813.1|595199_595877_+	N-6 DNA methylase	NA	B7T0H3	Staphylococcus_virus	71.5	5.9e-87
WP_015728814.1|595857_596058_+	hypothetical protein	NA	A0A223LFJ6	Staphylococcus_phage	83.1	6.9e-20
WP_015728815.1|596054_596405_+	hypothetical protein	NA	Q4ZD40	Staphylococcus_phage	98.3	5.0e-58
WP_041614783.1|596404_596620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015728817.1|596616_597015_+	hypothetical protein	NA	A0A1J0MFF1	Staphylococcus_phage	68.9	6.8e-43
WP_015728818.1|597014_597272_+	hypothetical protein	NA	A0A1J0MFL3	Staphylococcus_phage	92.9	3.6e-37
WP_015728820.1|597445_597757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015728821.1|597749_598259_+	dUTPase	NA	A0A2H4JAI9	uncultured_Caudovirales_phage	70.4	1.1e-61
WP_015728822.1|598295_598445_+	DUF1381 domain-containing protein	NA	A0A223LIB6	Staphylococcus_phage	95.9	1.0e-15
WP_041614785.1|598441_598708_+	hypothetical protein	NA	A0A223LFK9	Staphylococcus_phage	98.9	3.9e-34
WP_041614789.1|598708_599134_+	hypothetical protein	NA	A0A1J0MFD1	Staphylococcus_phage	99.3	9.7e-72
WP_015728824.1|599413_599761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015728825.1|599842_600337_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	79.9	6.6e-72
WP_015728826.1|600338_601613_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.4	2.1e-194
WP_015728827.1|601624_603070_+|portal	phage portal protein	portal	A0A1J0MFG2	Staphylococcus_phage	99.8	9.8e-273
WP_015728828.1|603062_604412_+|capsid	minor capsid protein	capsid	A0A1J0MF61	Staphylococcus_phage	98.9	6.8e-252
WP_037543592.1|604411_604606_+	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	100.0	3.5e-29
WP_041614791.1|604758_605367_+	DUF4355 domain-containing protein	NA	A0A1J0MFG0	Staphylococcus_phage	98.5	9.1e-47
WP_015728831.1|605384_606296_+	hypothetical protein	NA	A0A1J0MFM8	Staphylococcus_phage	100.0	5.0e-166
WP_015728832.1|606385_606835_+	Ig domain-containing protein	NA	A0A1J0MFD8	Staphylococcus_phage	100.0	8.4e-74
WP_015728833.1|606846_607179_+|head,tail	phage head-tail connector protein	head,tail	A0A1J0MFR4	Staphylococcus_phage	100.0	1.1e-54
WP_015728834.1|607480_607831_+	HK97 gp10 family phage protein	NA	A0A1J0MFN9	Staphylococcus_phage	100.0	2.4e-60
WP_015728835.1|607842_608238_+	hypothetical protein	NA	A0A1J0MFV3	Staphylococcus_phage	100.0	8.5e-70
WP_015728836.1|608255_608909_+|tail	phage major tail protein, TP901-1 family	tail	A0A1J0MG89	Staphylococcus_phage	100.0	1.1e-69
WP_015728837.1|608968_609349_+	hypothetical protein	NA	A0A1J0MFH0	Staphylococcus_phage	100.0	1.1e-63
WP_015728838.1|609378_609729_+	hypothetical protein	NA	A0A1J0MFN5	Staphylococcus_phage	100.0	3.0e-58
WP_015728839.1|609745_612865_+|tail	tail protein	tail	A0A223LI73	Staphylococcus_phage	100.0	1.6e-251
WP_015728840.1|612877_613810_+|tail	phage tail family protein	tail	A0A1J0MF79	Staphylococcus_phage	100.0	1.8e-179
WP_015728841.1|613822_615220_+	hypothetical protein	NA	A0A1J0MFL4	Staphylococcus_phage	100.0	1.4e-260
WP_015728842.1|615223_615916_+	hypothetical protein	NA	A0A1J0MFD6	Staphylococcus_phage	100.0	1.7e-102
WP_015728843.1|615927_616971_+	hypothetical protein	NA	A0A1J0MFI8	Staphylococcus_phage	100.0	3.0e-191
WP_015728844.1|616987_618259_+|plate	BppU family phage baseplate upper protein	plate	A0A1J0MFQ3	Staphylococcus_phage	99.8	1.2e-239
WP_015728845.1|618291_618666_+	hypothetical protein	NA	A0A1J0MFD0	Staphylococcus_phage	100.0	1.1e-53
WP_015728846.1|618789_620679_+	CHAP domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	97.6	0.0e+00
WP_015728847.1|620698_620953_+|holin	phage holin	holin	A0A1J0MFP5	Staphylococcus_phage	100.0	7.7e-40
WP_015728848.1|620965_621721_+	CHAP domain-containing protein	NA	A0A1J0MF88	Staphylococcus_phage	98.8	3.2e-150
WP_020219674.1|621957_622272_+	DUF3467 domain-containing protein	NA	A0A1J0MFR7	Staphylococcus_phage	100.0	3.4e-53
WP_015728850.1|622396_622612_+	hypothetical protein	NA	A0A1J0MFV7	Staphylococcus_phage	100.0	3.2e-31
WP_041614917.1|623250_623592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015728852.1|623912_624197_+|protease	protease	protease	NA	NA	NA	NA
623742:623760	attR	TCGAGATGGAAGGTAGTAT	NA	NA	NA	NA
>prophage 6
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	812063	820483	2617381		Synechococcus_phage(33.33%)	9	NA	NA
WP_014614280.1|812063_812546_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.9	3.1e-21
WP_080552893.1|812493_813666_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_014614278.1|813662_814364_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.2	1.0e-49
WP_014614277.1|814366_814627_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014614276.1|814628_815300_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_015728943.1|815292_817482_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.3	5.6e-139
WP_014614274.1|817460_818882_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.4	3.2e-50
WP_015728944.1|818885_819917_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.7	9.0e-63
WP_015728945.1|819916_820483_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.9	2.3e-28
>prophage 7
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	1255410	1267747	2617381		Bacillus_phage(25.0%)	14	NA	NA
WP_015729143.1|1255410_1256787_-	ATP-dependent DNA helicase RecQ	NA	J2YAJ8	Acanthamoeba_polyphaga_lentillevirus	34.8	2.1e-54
WP_015729144.1|1256779_1257727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729145.1|1257828_1258077_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	53.3	3.1e-17
WP_014613874.1|1258339_1258885_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_014613873.1|1259244_1261002_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	22.1	6.3e-16
WP_026066968.1|1260988_1261711_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.4	5.4e-46
WP_014613871.1|1261822_1262569_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_014613870.1|1262569_1263112_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	42.9	7.4e-08
WP_014613869.1|1263101_1263830_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	32.7	2.2e-10
WP_014613868.1|1263924_1264431_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_014613866.1|1264717_1265605_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.2	3.0e-38
WP_014613865.1|1265644_1266100_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_014613864.1|1266204_1266747_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_015729146.1|1266826_1267747_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	34.1	3.4e-05
>prophage 8
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	1308391	1368883	2617381	plate,protease,tail,capsid,holin,portal,transposase,terminase,integrase	Staphylococcus_phage(62.0%)	75	1308338:1308355	1352925:1352942
1308338:1308355	attL	TCTGCCCTTTTTTTGCCC	NA	NA	NA	NA
WP_037542938.1|1308391_1308892_-	ParB-like nuclease domain-containing protein	NA	L0P6I1	Lactobacillus_phage	82.4	1.8e-77
WP_049770165.1|1308891_1310181_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	44.0	1.1e-97
WP_015729170.1|1310180_1311332_-	hypothetical protein	NA	A0A220GFH1	Streptococcus_phage	54.2	9.3e-109
WP_041614846.1|1311391_1311754_-	hypothetical protein	NA	A0A240FHV6	Streptococcus_phage	41.9	7.4e-20
WP_015729172.1|1311743_1312406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729173.1|1312535_1312688_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_015729174.1|1312684_1313032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015729175.1|1313168_1314116_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1P8CMK9	Staphylococcus_phage	53.0	1.2e-85
WP_041614849.1|1314108_1314558_-|holin	phage holin family protein	holin	A0A1S6KVE0	Staphylococcus_phage	64.7	2.6e-43
WP_015729177.1|1314569_1316570_-|plate	BppU family phage baseplate upper protein	plate	I6P9N4	Staphylococcus_phage	44.6	1.1e-117
WP_015729178.1|1316640_1317912_-|plate	BppU family phage baseplate upper protein	plate	A0A1J0MFQ3	Staphylococcus_phage	80.9	3.9e-201
WP_015729181.1|1318970_1319591_-	hypothetical protein	NA	A0A1J0MFD6	Staphylococcus_phage	61.0	6.0e-70
WP_015729182.1|1319597_1319798_-	hypothetical protein	NA	A0A1J0MFL4	Staphylococcus_phage	67.6	7.4e-06
WP_099984955.1|1319784_1321359_-	peptidase	NA	A0A2I6PDE4	Staphylococcus_phage	49.1	1.4e-147
WP_080552907.1|1321359_1322097_-|tail	phage tail family protein	tail	I1W5Y8	Staphylococcus_phage	62.6	6.4e-87
WP_015729185.1|1322186_1327775_-|tail	phage tail tape measure protein	tail	A0A2I6PDS2	Staphylococcus_phage	55.1	0.0e+00
WP_015729187.1|1327985_1328336_-	hypothetical protein	NA	A0A0K1LKJ0	Staphylococcus_phage	57.8	1.2e-27
WP_015729188.1|1328443_1328905_-	Ig domain-containing protein	NA	A0A1J0MFD8	Staphylococcus_phage	52.0	2.1e-35
WP_015729189.1|1328999_1329680_-|tail	tail protein	tail	Q9B0D5	Staphylococcus_virus	75.0	7.7e-87
WP_015729190.1|1329716_1330112_-	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	74.8	1.3e-49
WP_015729191.1|1330113_1330515_-	hypothetical protein	NA	R4WAN5	Staphylococcus_phage	78.2	2.8e-52
WP_015729192.1|1330511_1330874_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	41.8	7.4e-20
WP_015729193.1|1330854_1331151_-	hypothetical protein	NA	A0A2H4JAM0	uncultured_Caudovirales_phage	42.9	5.3e-16
WP_015729194.1|1331219_1332347_-|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	73.8	1.3e-150
WP_015729195.1|1332375_1333098_-|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	52.2	1.4e-65
WP_015729196.1|1333087_1334242_-|portal	phage portal protein	portal	A0A075M040	Staphylococcus_phage	51.9	9.0e-112
WP_015729197.1|1334256_1335897_-|terminase	terminase large subunit	terminase	A8AT95	Listeria_phage	68.0	5.6e-224
WP_015729198.1|1335893_1336193_-	hypothetical protein	NA	A0A2H4JBX8	uncultured_Caudovirales_phage	58.5	2.6e-18
WP_015729199.1|1336329_1336665_-	HNH endonuclease	NA	D2XR61	Bacillus_phage	53.6	3.5e-24
WP_037542896.1|1336928_1337342_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1J0MFD1	Staphylococcus_phage	79.9	2.8e-55
WP_041614853.1|1337466_1337910_-	hypothetical protein	NA	A0A217ERD3	Bacillus_phage	46.4	1.3e-23
WP_049770166.1|1337930_1338503_-	hypothetical protein	NA	B3GVZ0	Streptococcus_phage	37.4	2.0e-19
WP_015729202.1|1338465_1338786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729203.1|1338786_1339149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729204.1|1339191_1339542_-	hypothetical protein	NA	Q4ZD40	Staphylococcus_phage	70.7	2.5e-41
WP_015729205.1|1339538_1339724_-	hypothetical protein	NA	A0A1J0MFY5	Staphylococcus_phage	68.9	1.4e-14
WP_049770177.1|1339729_1339924_-	hypothetical protein	NA	A0A223LIA9	Staphylococcus_phage	71.9	4.6e-21
WP_015729206.1|1339956_1340208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729207.1|1340357_1340564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729208.1|1340727_1341510_-	ATP-binding protein	NA	A0A1W6JPS4	Staphylococcus_phage	60.5	1.8e-87
WP_049770167.1|1341524_1342292_-	DnaD domain protein	NA	A0A1Q1PVU4	Staphylococcus_phage	60.9	1.3e-58
WP_015729210.1|1342340_1343060_-	hypothetical protein	NA	A0A0K2CZT8	Paenibacillus_phage	42.4	3.2e-43
WP_015729211.1|1343075_1343483_-	hypothetical protein	NA	A0A1L2JY32	Aeribacillus_phage	42.6	7.8e-18
WP_015729212.1|1343497_1343959_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	62.2	1.1e-49
WP_015729213.1|1343951_1344596_-	hypothetical protein	NA	A0A1Q1PW06	Staphylococcus_phage	63.8	7.1e-74
WP_015729214.1|1344658_1345573_-	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	77.6	9.3e-128
WP_015729215.1|1345586_1345787_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015729216.1|1345780_1347727_-	AAA family ATPase	NA	A0A0N9SKM4	Staphylococcus_phage	54.4	8.4e-195
WP_015729217.1|1347739_1348000_-	DUF1108 family protein	NA	A0A223LGN1	Staphylococcus_phage	49.4	3.9e-15
WP_015729218.1|1348086_1348383_-	DUF2482 family protein	NA	NA	NA	NA	NA
WP_015729220.1|1348575_1348839_-	helix-turn-helix domain-containing protein	NA	B7T0G2	Staphylococcus_virus	73.3	1.1e-30
WP_037544203.1|1348900_1349392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015729222.1|1349415_1349598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729223.1|1349794_1350022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015729224.1|1350197_1350509_+	helix-turn-helix transcriptional regulator	NA	B5WZL2	Staphylococcus_phage	67.0	3.3e-29
WP_015729225.1|1350522_1350984_+	hypothetical protein	NA	A0A223LGM3	Staphylococcus_phage	60.9	2.4e-47
WP_015729226.1|1351030_1351639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015729227.1|1351699_1352197_+	hypothetical protein	NA	B7T0F2	Staphylococcus_virus	42.6	1.9e-26
WP_015729228.1|1352168_1352924_+|integrase	site-specific integrase	integrase	I1W5Y5	Staphylococcus_phage	45.2	6.6e-47
WP_015729230.1|1353680_1354310_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.6	8.6e-32
1352925:1352942	attR	TCTGCCCTTTTTTTGCCC	NA	NA	NA	NA
WP_015729231.1|1354322_1354634_-	MTH1187 family thiamine-binding protein	NA	NA	NA	NA	NA
WP_014613817.1|1354634_1355621_-	ROK family glucokinase	NA	NA	NA	NA	NA
WP_014613816.1|1355617_1355821_-	YqgQ family protein	NA	NA	NA	NA	NA
WP_015729232.1|1355822_1357262_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_014613814.1|1357280_1357820_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_014613813.1|1357971_1358121_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_014613812.1|1358192_1358843_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_014613811.1|1358844_1359687_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.7	1.5e-15
WP_041613226.1|1359704_1360583_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_014613809.1|1360585_1361512_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_015729236.1|1361629_1362589_-	PstS family phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_015729237.1|1362857_1364897_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_014613806.1|1365189_1365789_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.2	4.6e-59
WP_014613804.1|1366135_1367242_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_015729238.1|1367563_1368883_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	22.7	8.7e-10
>prophage 9
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	1439219	1455333	2617381	tRNA	uncultured_Mediterranean_phage(40.0%)	12	NA	NA
WP_015729266.1|1439219_1440986_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SFI4	Hokovirus	34.1	6.0e-06
WP_015729267.1|1440985_1442257_-|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L0H9	Tupanvirus	24.1	3.5e-16
WP_014613729.1|1442618_1443494_-	SH3 domain-containing protein	NA	A0A0N9SGH1	Paenibacillus_phage	28.3	7.0e-08
WP_014613728.1|1443490_1443943_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_014613727.1|1443955_1446145_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	35.8	5.0e-10
WP_014613726.1|1446501_1447020_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.0	8.9e-27
WP_041614933.1|1447031_1449317_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	2.9e-69
WP_014613724.1|1449433_1451713_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	32.0	7.2e-28
WP_014613723.1|1451854_1452118_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.9	2.0e-06
WP_014613722.1|1452134_1453274_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	1.2e-87
WP_015729269.1|1453291_1454317_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_014613720.1|1454334_1455333_-	Holliday junction branch migration DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	29.1	8.0e-08
>prophage 10
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	1578185	1585977	2617381	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_015729338.1|1578185_1579442_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	68.4	1.1e-30
WP_015729339.1|1580073_1580385_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.9	2.2e-33
WP_015729340.1|1580411_1582844_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	81.7	0.0e+00
WP_015729341.1|1583134_1584316_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	62.5	9.8e-138
WP_014613608.1|1584463_1585417_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	80.4	6.4e-63
WP_014613607.1|1585413_1585977_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	56.8	1.5e-56
>prophage 11
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	1591161	1611433	2617381		Staphylococcus_phage(94.74%)	23	NA	NA
WP_015729343.1|1591161_1591629_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	64.9	9.4e-52
WP_014613599.1|1591643_1592825_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	66.2	8.3e-153
WP_014613598.1|1592838_1593468_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	59.5	7.2e-63
WP_014613597.1|1593472_1594519_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	54.7	1.4e-106
WP_015729344.1|1594975_1596529_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	60.3	2.0e-13
WP_014613595.1|1596917_1597781_-	autolysin	NA	A0A1W6JQU5	Staphylococcus_phage	41.7	4.2e-37
WP_014613594.1|1597937_1598162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080552908.1|1598362_1598848_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	36.7	3.8e-19
WP_014613592.1|1598850_1599282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014613591.1|1599284_1599734_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	36.7	1.0e-10
WP_014613590.1|1599900_1600611_-	transaldolase	NA	M1PR54	Cyanophage	39.0	2.0e-21
WP_014613589.1|1600763_1601066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041614874.1|1601098_1601464_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	50.8	3.4e-25
WP_014613587.1|1601460_1601808_+	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_015729346.1|1601909_1602746_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	69.7	5.9e-113
WP_015729347.1|1602887_1603799_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	68.3	5.5e-88
WP_015729348.1|1603886_1605086_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	79.8	7.5e-178
WP_014613583.1|1605549_1607130_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	76.0	2.2e-241
WP_014613582.1|1607527_1608280_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	61.6	3.0e-84
WP_014613581.1|1608284_1608755_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	53.8	7.1e-39
WP_014613580.1|1608813_1609065_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	70.6	4.6e-29
WP_015729349.1|1609040_1610027_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	47.3	6.2e-77
WP_014613578.1|1610029_1611433_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.3	2.4e-135
>prophage 12
NC_014925	Staphylococcus pseudintermedius HKU10-03, complete sequence	2617381	2195815	2213337	2617381	integrase	Streptococcus_phage(100.0%)	20	2191329:2191348	2214722:2214741
2191329:2191348	attL	CTACAACTAACCAACGCTTT	NA	NA	NA	NA
WP_015729619.1|2195815_2197033_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	99.8	1.9e-232
WP_000814511.1|2197114_2197318_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|2197778_2198009_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|2198005_2198428_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|2198931_2199285_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|2199344_2199512_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691727.1|2199630_2201550_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	100.0	0.0e+00
WP_001791010.1|2201565_2201682_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224319.1|2201926_2202859_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_000769868.1|2202855_2203857_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|2203853_2206031_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|2206033_2208481_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|2208464_2208971_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|2208945_2209443_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|2209559_2209781_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|2209823_2211029_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|2211051_2211204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|2211206_2212592_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|2212620_2213007_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|2213022_2213337_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
2214722:2214741	attR	AAAGCGTTGGTTAGTTGTAG	NA	NA	NA	NA
