assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000183135.1_ASM18313v1	NC_014734	Paludibacter propionicigenes WB4, complete sequence	1	35835-35990	1	CRISPRCasFinder	no	cas3	cas3,cas13a,DEDDh,csa3,cas13b	Unclear	GATTGCACTTTTGTTCTTTCAGATCGTACT	30	0	0	NA	NA	NA	2	2	Unclear	cas3,cas13a,DEDDh,csa3,cas13b	NA|103aa|up_5|NC_014734.1_30624_30933_+,NA|178aa|up_4|NC_014734.1_31134_31668_+,NA|242aa|down_8|NC_014734.1_44228_44954_+,NA|188aa|down_9|NC_014734.1_45013_45577_+	NA|243aa|up_9|NC_014734.1_25622_26351_-	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides	NA|259aa|up_8|NC_014734.1_26356_27133_-	COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only]	NA|609aa|up_7|NC_014734.1_27143_28970_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|216aa|up_6|NC_014734.1_29774_30422_+	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins	NA|103aa|up_5|NC_014734.1_30624_30933_+	NA	NA|178aa|up_4|NC_014734.1_31134_31668_+	NA	NA|141aa|up_3|NC_014734.1_31821_32244_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|608aa|up_2|NC_014734.1_32365_34189_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|280aa|up_1|NC_014734.1_34479_35319_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|133aa|up_0|NC_014734.1_35325_35724_+	pfam07843, DUF1634, Protein of unknown function (DUF1634)	NA|126aa|down_0|NC_014734.1_36128_36506_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|284aa|down_1|NC_014734.1_36877_37729_+	pfam04072, LCM, Leucine carboxyl methyltransferase	NA|92aa|down_2|NC_014734.1_37858_38134_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|282aa|down_3|NC_014734.1_38308_39154_+	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|312aa|down_4|NC_014734.1_39384_40320_+	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|282aa|down_5|NC_014734.1_40557_41403_+	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|293aa|down_6|NC_014734.1_41402_42281_+	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]	cas3|409aa|down_7|NC_014734.1_42495_43722_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|242aa|down_8|NC_014734.1_44228_44954_+	NA	NA|188aa|down_9|NC_014734.1_45013_45577_+	NA
GCF_000183135.1_ASM18313v1	NC_014734	Paludibacter propionicigenes WB4, complete sequence	2	223908-225657	1,2,1	CRT,CRISPRCasFinder,PILER-CR	no	cas13a	cas3,cas13a,DEDDh,csa3,cas13b	Type VI-A	GTTGTAGTTCCCTTCAATTTTGGGATAATCCACAAG,TAGTTCCCTTCAATTTTGGGATAATCCA,GTTGTAGTTCCCTTCAATTTTGGGATAATCCACAAG	36,28,36	0	0	NA	NA	NA:NA:NA	26,26,25	26	TypeVI-A	cas3,cas13a,DEDDh,csa3,cas13b	NA,cas13a|1155aa|down_0|NC_014734.1_225748_229213_-,NA|248aa|down_1|NC_014734.1_229791_230535_+,NA|48aa|down_2|NC_014734.1_231330_231474_+	NA|779aa|up_9|NC_014734.1_207128_209465_-	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|788aa|up_8|NC_014734.1_209585_211949_-	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|417aa|up_7|NC_014734.1_211987_213238_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|441aa|up_6|NC_014734.1_213342_214665_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|521aa|up_5|NC_014734.1_214933_216496_+	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only]	NA|300aa|up_4|NC_014734.1_216549_217449_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|319aa|up_3|NC_014734.1_217527_218484_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|430aa|up_2|NC_014734.1_218517_219807_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|726aa|up_1|NC_014734.1_219976_222154_-	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region	NA|276aa|up_0|NC_014734.1_222981_223809_+	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	cas13a|1155aa|down_0|NC_014734.1_225748_229213_-	NA	NA|248aa|down_1|NC_014734.1_229791_230535_+	NA	NA|48aa|down_2|NC_014734.1_231330_231474_+	NA	NA|178aa|down_3|NC_014734.1_231557_232091_-	pfam14235, DUF4337, Domain of unknown function (DUF4337)	NA|1205aa|down_4|NC_014734.1_232872_236487_-	COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]	NA|158aa|down_5|NC_014734.1_236721_237195_-	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase	NA|130aa|down_6|NC_014734.1_237471_237861_+	pfam16022, DUF4783, Domain of unknown function (DUF4783)	NA|280aa|down_7|NC_014734.1_237853_238693_+	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes	NA|251aa|down_8|NC_014734.1_238790_239543_-	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|445aa|down_9|NC_014734.1_239753_241088_-	PRK14030, PRK14030, glutamate dehydrogenase; Provisional
GCF_000183135.1_ASM18313v1	NC_014734	Paludibacter propionicigenes WB4, complete sequence	3	1229340-1229433	3	CRISPRCasFinder	no		cas3,cas13a,DEDDh,csa3,cas13b	Orphan	GTTCCCCTTTAGGGGTTAGGGGT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas13a,DEDDh,csa3,cas13b	NA|268aa|up_8|NC_014734.1_1216780_1217584_+,NA|129aa|up_6|NC_014734.1_1219154_1219541_+,NA|139aa|up_3|NC_014734.1_1222787_1223204_+,NA|302aa|down_1|NC_014734.1_1232473_1233379_-,NA|206aa|down_2|NC_014734.1_1233955_1234573_-,NA|103aa|down_5|NC_014734.1_1236512_1236821_-,NA|545aa|down_8|NC_014734.1_1239636_1241271_-	NA|236aa|up_9|NC_014734.1_1215959_1216667_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|268aa|up_8|NC_014734.1_1216780_1217584_+	NA	NA|408aa|up_7|NC_014734.1_1217791_1219015_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|129aa|up_6|NC_014734.1_1219154_1219541_+	NA	NA|279aa|up_5|NC_014734.1_1219669_1220506_+	pfam13115, YtkA, YtkA-like	NA|687aa|up_4|NC_014734.1_1220582_1222643_+	TIGR01778, TonB-copper, TonB-dependent copper receptor	NA|139aa|up_3|NC_014734.1_1222787_1223204_+	NA	NA|108aa|up_2|NC_014734.1_1223362_1223686_+	TIGR02052, periplasmic_mercuric_ion_binding_protein, mercuric transport protein periplasmic component	NA|1263aa|up_1|NC_014734.1_1223784_1227573_+	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|474aa|up_0|NC_014734.1_1227839_1229261_+	pfam02321, OEP, Outer membrane efflux protein	NA|555aa|down_0|NC_014734.1_1230760_1232425_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|302aa|down_1|NC_014734.1_1232473_1233379_-	NA	NA|206aa|down_2|NC_014734.1_1233955_1234573_-	NA	NA|167aa|down_3|NC_014734.1_1234585_1235086_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|424aa|down_4|NC_014734.1_1235222_1236494_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|103aa|down_5|NC_014734.1_1236512_1236821_-	NA	NA|143aa|down_6|NC_014734.1_1236833_1237262_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|643aa|down_7|NC_014734.1_1237445_1239374_-	cd16015, LTA_synthase, Lipoteichoic acid synthase like	NA|545aa|down_8|NC_014734.1_1239636_1241271_-	NA	NA|145aa|down_9|NC_014734.1_1241319_1241754_-	pfam06210, DUF1003, Protein of unknown function (DUF1003)
GCF_000183135.1_ASM18313v1	NC_014734	Paludibacter propionicigenes WB4, complete sequence	4	2786079-2786274	4	CRISPRCasFinder	no		cas3,cas13a,DEDDh,csa3,cas13b	Orphan	AAACAATGCTTCATTGTTTGGAAAAG	26	0	0	NA	NA	NA	4	4	Orphan	cas3,cas13a,DEDDh,csa3,cas13b	NA|376aa|up_6|NC_014734.1_2776564_2777692_+,NA|259aa|up_0|NC_014734.1_2784947_2785724_-,NA|74aa|down_1|NC_014734.1_2787225_2787447_+,NA|210aa|down_3|NC_014734.1_2788505_2789135_+,NA|201aa|down_6|NC_014734.1_2791423_2792026_+,NA|111aa|down_7|NC_014734.1_2792030_2792363_+	NA|335aa|up_9|NC_014734.1_2772679_2773684_+	cd19123, AKR_AKR3G1, AKR3G family of aldo-keto reductase (AKR)	NA|508aa|up_8|NC_014734.1_2773691_2775215_+	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase	NA|413aa|up_7|NC_014734.1_2775316_2776555_+	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|376aa|up_6|NC_014734.1_2776564_2777692_+	NA	NA|452aa|up_5|NC_014734.1_2777884_2779240_+	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|81aa|up_4|NC_014734.1_2779568_2779811_+	cd10449, GIY-YIG_SLX1_like, Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its homologs	NA|627aa|up_3|NC_014734.1_2780256_2782137_-	pfam12034, DUF3520, Domain of unknown function (DUF3520)	NA|194aa|up_2|NC_014734.1_2782278_2782860_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|422aa|up_1|NC_014734.1_2782962_2784228_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|259aa|up_0|NC_014734.1_2784947_2785724_-	NA	NA|209aa|down_0|NC_014734.1_2786405_2787032_+	smart00060, FN3, Fibronectin type 3 domain	NA|74aa|down_1|NC_014734.1_2787225_2787447_+	NA	NA|292aa|down_2|NC_014734.1_2787640_2788516_+	pfam15931, DUF4747, Domain of unknown function (DUF4747)	NA|210aa|down_3|NC_014734.1_2788505_2789135_+	NA	NA|349aa|down_4|NC_014734.1_2789131_2790178_+	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein	NA|414aa|down_5|NC_014734.1_2790177_2791419_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|201aa|down_6|NC_014734.1_2791423_2792026_+	NA	NA|111aa|down_7|NC_014734.1_2792030_2792363_+	NA	NA|268aa|down_8|NC_014734.1_2792533_2793337_+	pfam14464, Prok-JAB, Prokaryotic homologs of the JAB domain	NA|127aa|down_9|NC_014734.1_2793647_2794028_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases
GCF_000183135.1_ASM18313v1	NC_014734	Paludibacter propionicigenes WB4, complete sequence	5	3132640-3133200	2,5,3	PILER-CR,CRISPRCasFinder,PILER-CR	no	cas13b	cas3,cas13a,DEDDh,csa3,cas13b	Type VI-B1,,Type VI-B2	GTTGTTTCTACCTTTCAAACGAATGGCACTTACAACTAT,CCTTTCAAACGAATGGCACTTACAAC,GTTGTTTCTACCTTTCAAACGAAGGGCACTTACAAC	39,26,36	0	0	NA	NA	NA:NA:VI-B1	6,8,6	8	,TypeVI-B1,TypeVI-B2	cas3,cas13a,DEDDh,csa3,cas13b	NA|374aa|up_5|NC_014734.1_3127197_3128319_-,NA	NA|90aa|up_9|NC_014734.1_3123528_3123798_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|406aa|up_8|NC_014734.1_3123902_3125120_+	COG1519, KdtA, 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]	NA|452aa|up_7|NC_014734.1_3125151_3126507_+	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|161aa|up_6|NC_014734.1_3126565_3127048_-	pfam04306, DUF456, Protein of unknown function (DUF456)	NA|374aa|up_5|NC_014734.1_3127197_3128319_-	NA	NA|285aa|up_4|NC_014734.1_3128534_3129389_+	smart00850, LytTR, LytTr DNA-binding domain	NA|265aa|up_3|NC_014734.1_3129477_3130272_+	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	NA|398aa|up_2|NC_014734.1_3130370_3131564_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|136aa|up_1|NC_014734.1_3131667_3132075_-	COG1895, COG1895, Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN [Function unknown]	NA|105aa|up_0|NC_014734.1_3132071_3132386_-	pfam01909, NTP_transf_2, Nucleotidyltransferase domain	cas13b|1155aa|down_0|NC_014734.1_3133283_3136748_-	cd20334, Cas13b, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b	NA|128aa|down_1|NC_014734.1_3137045_3137429_-	pfam18291, HU-HIG, HU domain fused to wHTH, Ig, or Glycine-rich motif	NA|313aa|down_2|NC_014734.1_3138390_3139329_+	cd19123, AKR_AKR3G1, AKR3G family of aldo-keto reductase (AKR)	NA|261aa|down_3|NC_014734.1_3139342_3140125_-	pfam13426, PAS_9, PAS domain	NA|419aa|down_4|NC_014734.1_3140219_3141476_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|314aa|down_5|NC_014734.1_3141816_3142758_+	PRK06223, PRK06223, malate dehydrogenase; Reviewed	NA|1010aa|down_6|NC_014734.1_3142996_3146026_+	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family	NA|134aa|down_7|NC_014734.1_3146323_3146725_+	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators	NA|426aa|down_8|NC_014734.1_3146828_3148106_+	pfam01103, Bac_surface_Ag, Surface antigen	NA|371aa|down_9|NC_014734.1_3148124_3149237_+	cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function
GCF_000183135.1_ASM18313v1	NC_014734	Paludibacter propionicigenes WB4, complete sequence	6	3245339-3245444	6	CRISPRCasFinder	no		cas3,cas13a,DEDDh,csa3,cas13b	Orphan	GAGACGCACGGCCGTGCGTCTTTAC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,cas13a,DEDDh,csa3,cas13b	NA|59aa|up_3|NC_014734.1_3240814_3240991_-,NA	NA|236aa|up_9|NC_014734.1_3234034_3234742_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|356aa|up_8|NC_014734.1_3234738_3235806_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|407aa|up_7|NC_014734.1_3235882_3237103_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|248aa|up_6|NC_014734.1_3237357_3238101_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|405aa|up_5|NC_014734.1_3238106_3239321_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|439aa|up_4|NC_014734.1_3239331_3240648_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|59aa|up_3|NC_014734.1_3240814_3240991_-	NA	NA|258aa|up_2|NC_014734.1_3241124_3241898_-	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism]	NA|637aa|up_1|NC_014734.1_3242032_3243943_-	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|130aa|up_0|NC_014734.1_3243963_3244353_-	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|127aa|down_0|NC_014734.1_3245899_3246280_-	pfam17253, DUF5320, Family of unknown function (DUF5320)	NA|297aa|down_1|NC_014734.1_3246599_3247490_-	pfam16269, DUF4922, Domain of unknown function (DUF4922)	NA|500aa|down_2|NC_014734.1_3247550_3249050_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|398aa|down_3|NC_014734.1_3249290_3250484_+	cd02953, DsbDgamma, DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD	NA|295aa|down_4|NC_014734.1_3250589_3251474_+	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	NA|271aa|down_5|NC_014734.1_3251542_3252355_+	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|82aa|down_6|NC_014734.1_3252357_3252603_-	cd10549, MtMvhB_like, Uncharacterized polyferredoxin-like protein	NA|372aa|down_7|NC_014734.1_3252626_3253742_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|369aa|down_8|NC_014734.1_3253868_3254975_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|121aa|down_9|NC_014734.1_3255004_3255367_-	PRK12275, PRK12275, hypothetical protein; Reviewed
