assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000177655.2_ASM17765v2	NC_014815	Micromonospora sp. L5, complete sequence	1	1934261-1934349	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	Orphan	CCGTACTGCGGCTGCTGCGGCGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	NA,NA	NA|640aa|up_9|NC_014815.1_1918411_1920331_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|595aa|up_8|NC_014815.1_1920288_1922073_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|627aa|up_7|NC_014815.1_1922086_1923967_-	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|419aa|up_6|NC_014815.1_1924045_1925302_+	cd10276, BamB_YfgL, Beta-barrel assembly machinery (Bam) complex component B and related proteins	NA|431aa|up_5|NC_014815.1_1925298_1926591_+	pfam13360, PQQ_2, PQQ-like domain	NA|445aa|up_4|NC_014815.1_1926591_1927926_-	cd02549, Peptidase_C39A, A sub-family of peptidase family C39	NA|223aa|up_3|NC_014815.1_1928374_1929043_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|381aa|up_2|NC_014815.1_1929063_1930206_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|850aa|up_1|NC_014815.1_1930411_1932961_+	pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum	NA|129aa|up_0|NC_014815.1_1933206_1933593_+	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|688aa|down_0|NC_014815.1_1934612_1936676_-	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ	NA|399aa|down_1|NC_014815.1_1936672_1937869_-	TIGR01930, 3-ketoacyl-CoA_thiolase, acetyl-CoA acetyltransferases	NA|440aa|down_2|NC_014815.1_1937972_1939292_-	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|462aa|down_3|NC_014815.1_1939524_1940910_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|272aa|down_4|NC_014815.1_1940997_1941813_+	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional	NA|381aa|down_5|NC_014815.1_1942584_1943727_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|470aa|down_6|NC_014815.1_1943736_1945146_+	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|234aa|down_7|NC_014815.1_1945142_1945844_+	pfam06778, Chlor_dismutase, Chlorite dismutase	NA|367aa|down_8|NC_014815.1_1945939_1947040_-	pfam03067, LPMO_10, Lytic polysaccharide mono-oxygenase, cellulose-degrading	NA|148aa|down_9|NC_014815.1_1947145_1947589_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]
GCF_000177655.2_ASM17765v2	NC_014815	Micromonospora sp. L5, complete sequence	2	2532757-2532853	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	Orphan	GTGGAACGCCGTGGGTGTCTCGCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	NA|206aa|up_8|NC_014815.1_2524038_2524656_+,NA|102aa|up_6|NC_014815.1_2525296_2525602_+,NA	NA|497aa|up_9|NC_014815.1_2519590_2521081_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|206aa|up_8|NC_014815.1_2524038_2524656_+	NA	NA|154aa|up_7|NC_014815.1_2524802_2525264_+	pfam06103, DUF948, Bacterial protein of unknown function (DUF948)	NA|102aa|up_6|NC_014815.1_2525296_2525602_+	NA	NA|894aa|up_5|NC_014815.1_2525598_2528280_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|154aa|up_4|NC_014815.1_2528407_2528869_+	pfam03652, RuvX, Holliday junction resolvase	NA|400aa|up_3|NC_014815.1_2528865_2530065_+	pfam02618, YceG, YceG-like family	NA|271aa|up_2|NC_014815.1_2530064_2530877_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|393aa|up_1|NC_014815.1_2531035_2532214_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|170aa|up_0|NC_014815.1_2532210_2532720_+	PRK00131, aroK, shikimate kinase; Reviewed	NA|267aa|down_0|NC_014815.1_2532937_2533738_-	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)	NA|181aa|down_1|NC_014815.1_2533734_2534277_-	pfam10002, DUF2243, Predicted membrane protein (DUF2243)	NA|359aa|down_2|NC_014815.1_2534369_2535446_+	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|147aa|down_3|NC_014815.1_2535442_2535883_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|186aa|down_4|NC_014815.1_2535969_2536527_+	PRK00529, PRK00529, elongation factor P; Validated	NA|145aa|down_5|NC_014815.1_2536526_2536961_+	TIGR01951, nusB, transcription antitermination factor NusB	NA|163aa|down_6|NC_014815.1_2537023_2537512_-	cd16837, BldD_C_like, C-terminal domain of BldD and similar transcription factors	NA|194aa|down_7|NC_014815.1_2537798_2538380_+	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|309aa|down_8|NC_014815.1_2538438_2539365_+	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|426aa|down_9|NC_014815.1_2539361_2540639_+	PRK09357, pyrC, dihydroorotase; Validated
GCF_000177655.2_ASM17765v2	NC_014815	Micromonospora sp. L5, complete sequence	3	2694838-2695019	1	PILER-CR	no		csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	Orphan	CGTACCGCCCGCGGGTCGAGCGTCTCCAGCGTGTCGGCGTCCAC	44	1	1	2694882-2694903	NC_014815.1_542905-542884	NA	2	2	Orphan	csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	NA|147aa|up_6|NC_014815.1_2687080_2687521_+,NA|153aa|up_1|NC_014815.1_2692849_2693308_+,NA	NA|382aa|up_9|NC_014815.1_2683939_2685085_-	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|325aa|up_8|NC_014815.1_2685142_2686117_-	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|193aa|up_7|NC_014815.1_2686166_2686745_-	COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification]	NA|147aa|up_6|NC_014815.1_2687080_2687521_+	NA	NA|52aa|up_5|NC_014815.1_2687583_2687739_+	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|154aa|up_4|NC_014815.1_2687744_2688206_+	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|261aa|up_3|NC_014815.1_2688353_2689136_+	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|1194aa|up_2|NC_014815.1_2689132_2692714_+	cd07302, CHD, cyclase homology domain	NA|153aa|up_1|NC_014815.1_2692849_2693308_+	NA	NA|492aa|up_0|NC_014815.1_2693338_2694814_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|593aa|down_0|NC_014815.1_2695500_2697279_+	pfam08386, Abhydrolase_4, TAP-like protein	NA|388aa|down_1|NC_014815.1_2697337_2698501_-	cd00567, ACAD, Acyl-CoA dehydrogenase	NA|672aa|down_2|NC_014815.1_2698497_2700513_-	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|536aa|down_3|NC_014815.1_2700699_2702307_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|380aa|down_4|NC_014815.1_2702303_2703443_-	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|559aa|down_5|NC_014815.1_2703439_2705116_-	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|265aa|down_6|NC_014815.1_2705112_2705907_-	TIGR03084, conserved_hypothetical_protein, TIGR03084 family protein	NA|204aa|down_7|NC_014815.1_2705939_2706551_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|248aa|down_8|NC_014815.1_2706657_2707401_-	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|226aa|down_9|NC_014815.1_2707616_2708294_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
GCF_000177655.2_ASM17765v2	NC_014815	Micromonospora sp. L5, complete sequence	4	3870692-3870769	3	CRISPRCasFinder	no	WYL	csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	Unclear	GGGGAGTTCACCGGTCCGGCCGTC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	NA|588aa|up_7|NC_014815.1_3862094_3863858_-,NA|57aa|up_0|NC_014815.1_3870467_3870638_+,NA	NA|256aa|up_9|NC_014815.1_3858115_3858883_+	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain	NA|1008aa|up_8|NC_014815.1_3858885_3861909_+	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA|588aa|up_7|NC_014815.1_3862094_3863858_-	NA	NA|471aa|up_6|NC_014815.1_3863894_3865307_+	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|494aa|up_5|NC_014815.1_3865318_3866800_+	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|180aa|up_4|NC_014815.1_3866789_3867329_-	pfam13671, AAA_33, AAA domain	NA|475aa|up_3|NC_014815.1_3867493_3868918_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|152aa|up_2|NC_014815.1_3869047_3869503_+	pfam06271, RDD, RDD family	NA|230aa|up_1|NC_014815.1_3869564_3870254_-	pfam13829, DUF4191, Domain of unknown function (DUF4191)	NA|57aa|up_0|NC_014815.1_3870467_3870638_+	NA	NA|979aa|down_0|NC_014815.1_3870838_3873775_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|619aa|down_1|NC_014815.1_3873943_3875800_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|330aa|down_2|NC_014815.1_3875848_3876838_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|429aa|down_3|NC_014815.1_3877250_3878537_+	PRK05159, aspC, aspartyl-tRNA synthetase; Provisional	NA|131aa|down_4|NC_014815.1_3878980_3879373_-	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|214aa|down_5|NC_014815.1_3879378_3880020_-	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB	NA|635aa|down_6|NC_014815.1_3880094_3881999_-	pfam09852, DUF2079, Predicted membrane protein (DUF2079)	NA|414aa|down_7|NC_014815.1_3882079_3883321_+	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family	NA|300aa|down_8|NC_014815.1_3883349_3884249_-	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239	NA|157aa|down_9|NC_014815.1_3884372_3884843_+	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family
GCF_000177655.2_ASM17765v2	NC_014815	Micromonospora sp. L5, complete sequence	5	6959337-6959430	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	Orphan	CCGCCTGCTCGCCGGAGAAGGCGGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas4	NA|222aa|up_5|NC_014815.1_6949827_6950493_-,NA	NA|314aa|up_9|NC_014815.1_6946063_6947005_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|318aa|up_8|NC_014815.1_6947181_6948135_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|108aa|up_7|NC_014815.1_6948173_6948497_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|387aa|up_6|NC_014815.1_6948658_6949819_+	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|222aa|up_5|NC_014815.1_6949827_6950493_-	NA	NA|438aa|up_4|NC_014815.1_6950775_6952089_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|332aa|up_3|NC_014815.1_6952096_6953092_+	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|288aa|up_2|NC_014815.1_6953094_6953958_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|347aa|up_1|NC_014815.1_6955854_6956895_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|269aa|up_0|NC_014815.1_6956922_6957729_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|197aa|down_0|NC_014815.1_6959600_6960191_-	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|334aa|down_1|NC_014815.1_6960401_6961403_-	PRK01315, PRK01315, putative inner membrane protein translocase component YidC; Provisional	NA|80aa|down_2|NC_014815.1_6961403_6961643_-	pfam01809, Haemolytic, Haemolytic domain	NA|138aa|down_3|NC_014815.1_6961684_6962098_-	pfam00825, Ribonuclease_P, Ribonuclease P	NA|46aa|down_4|NC_014815.1_6962132_6962270_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
