The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017960	Enterococcus faecium DO, complete sequence	2698137	743115	751587	2698137		Streptococcus_phage(66.67%)	9	NA	NA
WP_002294039.1|743115_743760_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|743774_744104_+	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_002288071.1|744117_745056_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.4	3.3e-35
WP_002288073.1|745091_745916_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|745908_746256_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002288078.1|746324_747197_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	3.1e-88
WP_002294035.1|747305_748427_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288081.1|748480_749083_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002288083.1|749397_751587_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
>prophage 2
NC_017960	Enterococcus faecium DO, complete sequence	2698137	804597	905084	2698137	holin,transposase,tRNA,integrase,terminase,head,capsid,protease,portal,tail	Enterococcus_phage(24.39%)	115	829918:829934	889508:889524
WP_002286621.1|804597_807396_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	1.6e-74
WP_002286618.1|807444_808971_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
WP_002286616.1|808985_809633_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286678.1|809816_810146_-	DUF4828 domain-containing protein	NA	NA	NA	NA	NA
WP_002286614.1|810322_811051_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_002286612.1|811066_812080_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002286608.1|812079_813357_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
WP_002286607.1|813419_816122_+	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286606.1|816273_816591_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002286604.1|816620_816941_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002286601.1|817048_818509_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002286598.1|818576_818798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286596.1|818828_819011_+	DUF3188 domain-containing protein	NA	NA	NA	NA	NA
WP_002286592.1|819010_819424_+	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
WP_002286589.1|819546_820728_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002286676.1|820798_820963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286587.1|821258_822398_-|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	47.1	2.6e-95
WP_002286584.1|822514_823099_-	DUF4352 domain-containing protein	NA	A8ASM1	Listeria_phage	42.3	1.2e-16
WP_002286582.1|823225_823657_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002286580.1|823674_823995_-	helix-turn-helix transcriptional regulator	NA	M1I9X0	Streptococcus_phage	50.0	7.7e-21
WP_002286578.1|824288_824429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286679.1|824726_824984_+	phosphomannomutase	NA	NA	NA	NA	NA
WP_002286674.1|824954_825263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286575.1|825340_826087_+	phage antirepressor	NA	A0A0B5A507	Paenibacillus_phage	44.1	2.5e-54
WP_002296611.1|826101_826305_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002286573.1|826320_826659_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_002296610.1|826645_826825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286568.1|826867_827338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286562.1|827424_828123_+	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	34.6	1.7e-25
WP_002286559.1|828300_828642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286557.1|828634_829306_+	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	47.4	4.2e-29
WP_002286553.1|829311_829998_+	hypothetical protein	NA	C9E2N1	Enterococcus_phage	69.1	3.2e-88
829918:829934	attL	ATTAATTTCAAAAATAA	NA	NA	NA	NA
WP_002286552.1|830000_830750_+	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	54.0	1.7e-31
WP_002286696.1|830761_831031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296607.1|831035_831200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286695.1|831192_831495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296606.1|831491_831653_+	antitoxin	NA	NA	NA	NA	NA
WP_002286694.1|831649_831955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286550.1|831954_832311_+	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	37.4	3.1e-10
WP_002322165.1|832297_832516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286547.1|832512_832932_+	YopX family protein	NA	D2IZL0	Enterococcus_phage	54.3	4.1e-30
WP_002286545.1|832928_833486_+	DUF1642 domain-containing protein	NA	A0A0C5KKV2	Enterococcus_phage	36.2	2.8e-10
WP_002286693.1|833482_833779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286542.1|833855_834269_+	autolysin	NA	C9E2P5	Enterococcus_phage	81.0	1.5e-56
WP_002296602.1|834577_834730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002300143.1|834726_835002_-	hypothetical protein	NA	A0A2H4JEH2	uncultured_Caudovirales_phage	45.7	9.9e-17
WP_002311723.1|835455_835662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296600.1|835857_836025_+	thymidylate synthase	NA	NA	NA	NA	NA
WP_002286540.1|836050_836395_+	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	57.1	3.8e-26
WP_002296599.1|836399_836681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286538.1|836783_837098_+|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002286533.1|837075_838770_+|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.6	3.0e-148
WP_002286530.1|838789_839968_+|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	5.4e-80
WP_002286527.1|839930_840617_+|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.0e-30
WP_002286525.1|840616_841777_+|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.1	1.8e-99
WP_002286524.1|841786_842662_+	hypothetical protein	NA	D2IYX3	Enterococcus_phage	74.2	5.6e-130
WP_002286523.1|842658_842970_+	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	42.1	6.3e-12
WP_002286522.1|842959_843313_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_002296598.1|843302_843704_+	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	33.3	1.1e-13
WP_002286516.1|843696_844101_+	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002286512.1|844112_844721_+	hypothetical protein	NA	Q8W5Z9	Listeria_phage	41.1	3.0e-34
WP_002286510.1|844739_845102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286502.1|845303_848735_+|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	44.4	3.1e-67
WP_002286500.1|848785_849523_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002286497.1|849532_851824_+|tail	phage tail protein	tail	A0A1D3SNL1	Enterococcus_phage	30.0	9.6e-89
WP_002286495.1|851847_853974_+	hypothetical protein	NA	A0A060AI60	Enterococcus_phage	40.1	1.4e-62
WP_002290627.1|853990_854140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286491.1|854136_854583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296594.1|854584_854722_+	XkdX family protein	NA	NA	NA	NA	NA
WP_002286686.1|854759_855053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286683.1|855049_855274_+|holin	phage holin	holin	NA	NA	NA	NA
WP_002286484.1|855270_856296_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	61.3	2.1e-64
WP_087046766.1|857235_858397_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_002286474.1|859320_859728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296902.1|859741_860143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|860144_860516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286680.1|860551_860854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286470.1|861102_861303_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	75.7	4.6e-08
WP_002286469.1|861607_862840_-	aminopeptidase	NA	NA	NA	NA	NA
WP_002286467.1|863093_863663_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002286465.1|863840_864281_-	flavodoxin	NA	NA	NA	NA	NA
WP_002286463.1|864438_865203_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002286461.1|865234_866158_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_002286457.1|866233_867373_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002286455.1|867365_868166_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002286453.1|868165_868993_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002321540.1|868970_869705_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002286449.1|869804_870671_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002286442.1|870684_871257_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002286428.1|872406_873258_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.0	1.7e-38
WP_002302719.1|873291_875325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002322625.1|875368_876649_+	EpaQ family protein	NA	NA	NA	NA	NA
WP_002289081.1|876858_877665_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002289079.1|877676_878897_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	1.1e-11
WP_002289078.1|878886_880473_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002289076.1|880511_882650_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002289074.1|883017_884001_-	serine hydrolase	NA	NA	NA	NA	NA
WP_002289073.1|884378_885770_+	sugar transferase	NA	NA	NA	NA	NA
WP_002289071.1|885785_886826_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	35.3	2.4e-07
WP_002289069.1|886844_887930_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_002289068.1|887962_888925_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_002302730.1|890345_891416_+	hypothetical protein	NA	NA	NA	NA	NA
889508:889524	attR	ATTAATTTCAAAAATAA	NA	NA	NA	NA
WP_002292875.1|891402_892824_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_002289359.1|892836_893844_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.9	1.2e-40
WP_002292874.1|893855_894860_+	N-acetylneuraminate synthase	NA	NA	NA	NA	NA
WP_002289362.1|894856_896005_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA	NA
WP_002289363.1|895977_896655_+	acetyltransferase	NA	NA	NA	NA	NA
WP_002326811.1|896644_897787_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A2K9L0G1	Tupanvirus	27.9	2.4e-24
WP_002289366.1|897799_898777_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002289368.1|898776_899685_+	dehydrogenase	NA	NA	NA	NA	NA
WP_002289370.1|899685_900438_+	acylneuraminate cytidylyltransferase family protein	NA	NA	NA	NA	NA
WP_002289372.1|900442_901390_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SKV4	Klosneuvirus	37.7	2.8e-50
WP_002285758.1|902898_903093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014387108.1|903082_903448_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_002296127.1|903536_905084_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NC_017960	Enterococcus faecium DO, complete sequence	2698137	1187268	1196329	2698137		Gordonia_phage(16.67%)	9	NA	NA
WP_002288023.1|1187268_1188564_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	4.5e-19
WP_002297115.1|1188743_1189121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288021.1|1189376_1190105_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.4	4.6e-45
WP_002295474.1|1190104_1190359_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002288017.1|1190360_1191032_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002288015.1|1191032_1193255_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	1.9e-150
WP_002288013.1|1193239_1194679_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.3e-53
WP_002288011.1|1194701_1195754_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.7	2.7e-62
WP_002288010.1|1195750_1196329_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	1.3e-26
>prophage 4
NC_017960	Enterococcus faecium DO, complete sequence	2698137	1657392	1710213	2698137	tRNA,protease,transposase	Streptococcus_phage(16.67%)	53	NA	NA
WP_002288495.1|1657392_1659102_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002288494.1|1659169_1660438_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_002296531.1|1660598_1661399_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002294134.1|1661395_1662208_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	46.8	2.0e-25
WP_002293875.1|1662401_1662959_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002293877.1|1662961_1663684_-	UMP kinase	NA	NA	NA	NA	NA
WP_002293878.1|1663819_1664701_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_002293880.1|1664799_1665582_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_002293881.1|1665940_1666420_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288429.1|1666636_1667728_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
WP_002288464.1|1667720_1667849_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_002288430.1|1667852_1668398_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_002288432.1|1668851_1670543_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.6	2.9e-74
WP_002288434.1|1670962_1671910_-	carbamate kinase	NA	NA	NA	NA	NA
WP_002288437.1|1672024_1673044_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_002288439.1|1673134_1674364_-	arginine deiminase	NA	NA	NA	NA	NA
WP_002288442.1|1674824_1675526_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288444.1|1676134_1677151_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.0	7.1e-60
WP_002288445.1|1677147_1677612_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288446.1|1677618_1678161_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288447.1|1678144_1678969_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_002288449.1|1679057_1680038_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.9	5.8e-19
WP_002288451.1|1680061_1681546_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002288452.1|1681557_1682547_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	36.8	2.1e-48
WP_002288457.1|1682794_1682962_+	DUF3042 family protein	NA	NA	NA	NA	NA
WP_002288458.1|1683023_1684835_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_002288459.1|1684831_1685197_-	DUF488 family protein	NA	NA	NA	NA	NA
WP_002288461.1|1685359_1685755_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_002288462.1|1685772_1686735_-	ROK family glucokinase	NA	NA	NA	NA	NA
WP_002293902.1|1686734_1686947_-	YqgQ family protein	NA	NA	NA	NA	NA
WP_002289885.1|1686967_1687666_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002289886.1|1687685_1688228_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002296124.1|1688359_1689364_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_164927925.1|1689360_1690311_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_002293905.1|1690345_1691152_-	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	32.1	1.0e-13
WP_002293906.1|1691317_1692274_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002296121.1|1692349_1692868_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	7.1e-24
WP_002296119.1|1692955_1693105_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002288531.1|1693332_1693779_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_002288533.1|1693973_1695869_-	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.2	6.0e-20
WP_002296918.1|1696143_1697589_-|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.0	1.5e-124
WP_080475345.1|1698216_1699374_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002296332.1|1700638_1701205_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296334.1|1701460_1702792_+	DUF1576 domain-containing protein	NA	NA	NA	NA	NA
WP_002296335.1|1702757_1703108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296336.1|1703199_1703619_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002296337.1|1703619_1703964_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_002287760.1|1704235_1705189_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002287776.1|1705380_1705977_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	8.7e-34
WP_002287775.1|1706100_1707900_+	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	I6XE30	Staphylococcus_phage	26.5	5.3e-10
WP_002297633.1|1708177_1708390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002293931.1|1708851_1709001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002311774.1|1709253_1710213_-|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	27.2	7.5e-11
>prophage 5
NC_017960	Enterococcus faecium DO, complete sequence	2698137	1714999	1847770	2698137	tRNA,transposase,integrase	Streptococcus_phage(41.67%)	120	1744809:1744824	1755544:1755559
WP_002288576.1|1714999_1716253_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	7.7e-24
WP_002288577.1|1716323_1716809_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002288579.1|1716831_1717590_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.4	1.9e-25
WP_002288581.1|1717605_1718784_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	48.9	3.9e-102
WP_002288584.1|1719013_1721134_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.1	2.8e-220
WP_002296838.1|1721356_1722082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288586.1|1722071_1722581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288588.1|1722651_1724100_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.7e-19
WP_002288590.1|1724099_1724816_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_002288595.1|1724796_1725147_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002288592.1|1725290_1726064_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002302293.1|1726820_1727123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|1727326_1728505_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002323892.1|1729612_1729927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|1730043_1731222_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002321266.1|1731558_1731798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289617.1|1732159_1732420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289618.1|1732604_1733102_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002289619.1|1733231_1733942_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_002289620.1|1733954_1735619_-	acetolactate synthase AlsS	NA	NA	NA	NA	NA
WP_002321263.1|1735823_1736291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321035.1|1737617_1737833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303949.1|1737842_1738658_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002288989.1|1738918_1739362_-	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA	NA
WP_002321036.1|1739495_1739834_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288986.1|1739821_1740199_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288985.1|1740422_1741616_+	MFS transporter	NA	NA	NA	NA	NA
WP_002288984.1|1741781_1742204_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002321037.1|1742598_1742793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288983.1|1742789_1743284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288982.1|1743445_1744618_-	class C sortase	NA	NA	NA	NA	NA
1744809:1744824	attL	TTTGTTTCCAATAGTT	NA	NA	NA	NA
WP_002288981.1|1744823_1745639_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002288979.1|1745788_1746235_-	cell wall anchor	NA	NA	NA	NA	NA
WP_158003446.1|1746231_1747236_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002352916.1|1747275_1747605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305732.1|1747730_1750058_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002288970.1|1750900_1751194_-	DUF2087 domain-containing protein	NA	NA	NA	NA	NA
WP_002288969.1|1751596_1752775_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	31.1	1.4e-30
WP_002300928.1|1752878_1753193_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002288966.1|1753299_1753515_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288964.1|1753814_1754057_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002288962.1|1754043_1754472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296127.1|1754623_1756171_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
1755544:1755559	attR	TTTGTTTCCAATAGTT	NA	NA	NA	NA
WP_014748682.1|1756259_1756625_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_002285758.1|1756614_1756809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289210.1|1757297_1757672_-	VOC family protein	NA	NA	NA	NA	NA
WP_002296814.1|1757694_1759095_-	beta-fructofuranosidase	NA	NA	NA	NA	NA
WP_002289214.1|1759098_1759509_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002289215.1|1759526_1760018_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002289216.1|1760027_1760819_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002289217.1|1760811_1761585_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002296812.1|1761740_1764263_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_002289219.1|1764354_1765227_-	ROK family protein	NA	NA	NA	NA	NA
WP_002289220.1|1765262_1765730_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002289221.1|1765739_1767209_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002296810.1|1767279_1768698_-	family 43 glycosylhydrolase	NA	NA	NA	NA	NA
WP_002296809.1|1768819_1769800_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_087040414.1|1770079_1771242_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	53.5	1.6e-79
WP_002305710.1|1771334_1771844_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002343922.1|1772182_1773136_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_077828749.1|1773088_1773325_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289051.1|1773744_1774866_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_002321361.1|1775193_1776603_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_002289053.1|1776599_1777328_+	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	37.1	5.1e-36
WP_002289055.1|1777455_1778367_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	42.2	1.1e-59
WP_002289057.1|1778383_1779391_-	lipoprotein	NA	A0A1S5SEZ8	Streptococcus_phage	63.9	4.8e-117
WP_002289059.1|1779387_1781517_-	FUSC family protein	NA	A0A1S5SF30	Streptococcus_phage	60.3	3.1e-182
WP_002296840.1|1781817_1783005_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002321772.1|1783097_1785443_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.0	0.0e+00
WP_002288938.1|1785429_1785819_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	65.9	1.4e-40
WP_002297208.1|1785868_1786765_-	AAA family ATPase	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	29.7	1.1e-16
WP_002288935.1|1786767_1788615_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_002288934.1|1788711_1789212_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	59.6	7.0e-53
WP_033657400.1|1789224_1789449_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.8	8.8e-24
WP_002286940.1|1789552_1791463_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_002305703.1|1792208_1792346_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002286934.1|1792342_1793527_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	60.8	1.9e-141
WP_002286933.1|1793782_1794037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286932.1|1794061_1795204_-	DNA cytosine methyltransferase	NA	A0A1S5SEK0	Streptococcus_phage	62.1	1.7e-126
WP_002286930.1|1795263_1796616_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	64.6	5.9e-163
WP_002286928.1|1796686_1797031_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_002286926.1|1797040_1797415_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	62.9	1.1e-34
WP_002286925.1|1797427_1797742_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	53.4	1.7e-25
WP_002286924.1|1797855_1801083_-	fibrinogen-binding MSCRAMM adhesin Fss3	NA	NA	NA	NA	NA
WP_002286921.1|1801161_1801824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286913.1|1802196_1802544_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002293717.1|1802679_1803441_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_002293716.1|1803430_1803952_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002297190.1|1804121_1804913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290277.1|1805036_1805288_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_002290274.1|1805299_1805575_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_002293714.1|1805827_1806382_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
WP_002297192.1|1806460_1806982_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_002293710.1|1806985_1807564_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_002293709.1|1807675_1809094_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002293708.1|1809114_1809453_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_002297194.1|1809412_1809916_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_002293705.1|1810046_1810751_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
WP_002297195.1|1810747_1812484_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	1.2e-27
WP_002297196.1|1812586_1815058_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	28.8	7.0e-45
WP_002289807.1|1818402_1819293_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA	NA
WP_002289809.1|1819489_1819972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289810.1|1820179_1820545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002326708.1|1820635_1820953_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002296840.1|1821213_1822401_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002347285.1|1823223_1824519_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	5.0e-10
WP_002287105.1|1824674_1825649_-	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	5.4e-25
WP_002305693.1|1828086_1828518_-	DUF4231 domain-containing protein	NA	NA	NA	NA	NA
WP_002294831.1|1832952_1833645_-	N-acetylmuramoyl-L-alanine amidase	NA	Q9MCC6	Lactobacillus_phage	43.4	2.3e-30
WP_002294835.1|1834081_1834651_-	prevent-host-death protein	NA	NA	NA	NA	NA
WP_002304701.1|1834724_1835048_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294839.1|1835201_1836014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304700.1|1836367_1837216_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_002289045.1|1837360_1838302_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_002296533.1|1840574_1842746_-	copper/silver-translocating P-type ATPase CopB	NA	A0A218MNH6	uncultured_virus	32.3	5.0e-71
WP_002289041.1|1842765_1844952_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.6	1.5e-120
WP_002289040.1|1844951_1845161_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_002289038.1|1845173_1845614_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_002289037.1|1845687_1846227_-	transcriptional regulator	NA	A0A097BYE2	Leuconostoc_phage	34.5	3.8e-20
WP_002297185.1|1846474_1847770_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
>prophage 6
NC_017960	Enterococcus faecium DO, complete sequence	2698137	1855185	1914045	2698137	tRNA,transposase,portal	Streptococcus_phage(28.57%)	51	NA	NA
WP_002288767.1|1855185_1856484_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.3	1.2e-59
WP_002296294.1|1856523_1857714_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002321579.1|1857734_1858262_-	DUF5590 domain-containing protein	NA	NA	NA	NA	NA
WP_002288763.1|1858308_1861098_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5C8	Streptococcus_phage	30.9	1.4e-89
WP_002288762.1|1861244_1861445_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.2	2.5e-22
WP_002323868.1|1861896_1862217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288760.1|1862719_1863838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299522.1|1864308_1865616_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_002289548.1|1865734_1866934_+	YdcF family protein	NA	NA	NA	NA	NA
WP_002289547.1|1866960_1868229_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.1	2.2e-42
WP_002289561.1|1868391_1869039_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002289559.1|1869446_1869950_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002289551.1|1870945_1871221_+	acylphosphatase	NA	NA	NA	NA	NA
WP_002289550.1|1871421_1871769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304673.1|1871936_1872866_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_002326704.1|1874414_1875323_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002295755.1|1875378_1875876_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289246.1|1875858_1876596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014748700.1|1877093_1877315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115250347.1|1878218_1879380_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_073981173.1|1879786_1880140_-	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002287760.1|1880383_1881337_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_044051698.1|1882105_1882297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164927922.1|1882736_1882964_-|portal	phage portal protein	portal	M1PLL1	Streptococcus_phage	47.7	1.9e-13
WP_014748707.1|1883899_1884316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134789284.1|1884282_1884477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296127.1|1885080_1886628_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_002287659.1|1886729_1887083_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_002285758.1|1887072_1887267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134789296.1|1887589_1887916_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002338465.1|1888132_1888300_-	endo-1,4-beta-xylanase	NA	NA	NA	NA	NA
WP_002289864.1|1888327_1889194_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002338467.1|1889216_1890869_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	39.4	2.4e-102
WP_002288192.1|1890870_1891386_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002288195.1|1892364_1893678_-	cupin domain-containing protein	NA	A0A1V0SH58	Hokovirus	26.1	1.3e-37
WP_002288197.1|1893746_1894691_-	GDP-L-fucose synthase	NA	A0A0E3HQW0	Synechococcus_phage	54.2	2.9e-92
WP_002288198.1|1894712_1895768_-	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	62.8	8.8e-122
WP_082206211.1|1896083_1896275_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_133141719.1|1896392_1897178_-	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA	NA
WP_025479580.1|1898020_1898536_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	32.9	2.0e-18
WP_002338472.1|1899100_1900630_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_002288219.1|1900716_1901931_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_002288204.1|1901934_1902846_-	alpha-1,2-fucosyltransferase	NA	NA	NA	NA	NA
WP_002288205.1|1902983_1903850_-	hypothetical protein	NA	R4THE2	Phaeocystis_globosa_virus	26.5	7.7e-15
WP_002288206.1|1903846_1905013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288207.1|1905026_1907102_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002288221.1|1907375_1908188_-	acyltransferase	NA	NA	NA	NA	NA
WP_002288208.1|1908201_1909452_-	nucleotide sugar dehydrogenase	NA	M1HHY3	Acanthocystis_turfacea_Chlorella_virus	50.1	2.3e-105
WP_193354329.1|1909471_1910515_-	GDP-mannose 4,6-dehydratase	NA	A0A2K9L0I7	Tupanvirus	29.3	2.1e-30
WP_002288211.1|1910563_1911358_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_002288215.1|1913091_1914045_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NC_017960	Enterococcus faecium DO, complete sequence	2698137	2073417	2079090	2698137	terminase,head,capsid,portal,tail	uncultured_Caudovirales_phage(50.0%)	7	NA	NA
WP_002296483.1|2073417_2073753_-|head	phage head closure protein	head	V5UQC7	Enterococcus_phage	35.6	4.7e-13
WP_002296484.1|2073739_2074024_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_002296485.1|2074079_2075603_-|capsid	phage major capsid protein	capsid	A0A1W6JPR8	Staphylococcus_phage	37.4	1.4e-48
WP_002296486.1|2075595_2076771_-|portal	phage portal protein	portal	A0A2H4J5A4	uncultured_Caudovirales_phage	35.6	3.2e-64
WP_002317249.1|2076774_2076960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296487.1|2076925_2078620_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	43.8	9.1e-129
WP_002296488.1|2078616_2079090_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
>prophage 8
NC_017960	Enterococcus faecium DO, complete sequence	2698137	2296939	2313194	2698137	protease,transposase,bacteriocin	uncultured_virus(28.57%)	17	NA	NA
WP_002296840.1|2296939_2298127_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002288864.1|2298539_2300165_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
WP_002288862.1|2300215_2300500_-	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	40.2	2.0e-12
WP_002288860.1|2300724_2301387_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002288858.1|2301462_2302755_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002288856.1|2302924_2303554_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_002288854.1|2303656_2304466_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	33.6	3.1e-34
WP_002288853.1|2304520_2305390_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_002288852.1|2305390_2306707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288851.1|2306703_2308539_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.7	4.0e-37
WP_002288850.1|2308543_2309248_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	5.8e-45
WP_002288847.1|2309437_2310298_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.4	2.7e-12
WP_002322652.1|2310284_2310854_-	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_000222572.1|2311483_2312437_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002321654.1|2312433_2312580_-|bacteriocin	EntF family bacteriocin induction factor	bacteriocin	NA	NA	NA	NA
WP_002287810.1|2312683_2312995_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_002304799.1|2312996_2313194_-|bacteriocin	leucocin A/sakacin P family class II bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 1
NC_017961	Enterococcus faecium DO plasmid 1, complete sequence	36262	3749	10178	36262	transposase	Bacillus_phage(50.0%)	8	NA	NA
WP_001015311.1|3749_4430_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_000599739.1|4627_5233_+	cell filamentation protein	NA	NA	NA	NA	NA
WP_000170424.1|5248_5821_+	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	46.0	6.8e-36
WP_073120187.1|6293_6866_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	57.1	5.0e-55
WP_002322130.1|8165_8420_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	50.0	4.1e-09
WP_000199136.1|8530_8785_-|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	47.6	2.1e-13
WP_001196543.1|8977_9253_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429439.1|9224_10178_-	ParA family protein	NA	F0PIG8	Enterococcus_phage	26.1	7.7e-16
>prophage 2
NC_017961	Enterococcus faecium DO plasmid 1, complete sequence	36262	18943	35886	36262	transposase	Streptococcus_phage(92.31%)	15	NA	NA
WP_002328852.1|18943_19624_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	7.6e-127
WP_000774078.1|20674_21187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000420682.1|21717_22032_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|22047_22434_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|22462_23848_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|23850_24003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|24025_25231_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_002286940.1|26014_27925_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_032509114.1|28028_28253_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	97.1	8.5e-27
WP_000342539.1|28369_28867_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|28841_29348_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|29331_31779_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_014748747.1|31781_33959_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	85.8	5.7e-309
WP_001574272.1|33955_34957_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	99.7	2.5e-190
WP_001224319.1|34953_35886_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
>prophage 1
NC_017962	Enterococcus faecium DO plasmid 2, complete sequence	66247	0	60059	66247	transposase,bacteriocin	Streptococcus_phage(62.07%)	60	NA	NA
WP_002287920.1|514_1195_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	7.6e-127
WP_002289340.1|1496_2036_+	DUF536 domain-containing protein	NA	NA	NA	NA	NA
WP_002292472.1|2051_2222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000389746.1|2535_2997_-	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	36.1	1.7e-05
WP_000713874.1|3129_3504_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002289343.1|3557_5684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289345.1|5680_6301_+	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	29.0	8.2e-11
WP_002303562.1|6414_6552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298770.1|6993_7374_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA	NA
WP_002289347.1|7355_8270_+	relaxase/mobilization nuclease domain-containing protein	NA	A0A1B0RXG0	Streptococcus_phage	47.3	5.8e-05
WP_002289349.1|8509_9199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110300541.1|9319_9406_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_002298753.1|10827_11115_-	PrgN	NA	NA	NA	NA	NA
WP_002298755.1|11250_12750_-	primase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002389872.1|13341_13767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297404.1|14176_15427_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002287942.1|15567_16380_-	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	32.6	4.7e-30
WP_002287941.1|16580_17759_-|transposase	IS256-like element ISEfm2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	24.9	3.4e-29
WP_002287940.1|18307_19687_+	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	42.5	2.8e-96
WP_002287938.1|20270_20861_+	SOS response-associated peptidase	NA	A0A1P8CX02	Bacillus_phage	33.0	2.1e-08
WP_002287937.1|20891_22319_-|transposase	IS1182-like element ISEfa12 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	47.8	4.4e-124
WP_014748756.1|22421_22643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014748757.1|22675_22876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287936.1|23032_23647_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	32.4	5.3e-18
WP_002287934.1|24071_25061_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	43.1	1.1e-57
WP_002287933.1|25301_25715_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	40.6	4.3e-16
WP_002287931.1|25711_25948_-	addiction module antitoxin	NA	NA	NA	NA	NA
WP_002287944.1|26139_26766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287930.1|27137_29150_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_002287929.1|29779_30841_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002287928.1|31036_31771_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287927.1|31784_32582_-	fructoselysine 6-kinase	NA	NA	NA	NA	NA
WP_002287926.1|32604_33315_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287925.1|33439_34795_-	amino acid permease	NA	NA	NA	NA	NA
WP_002287924.1|34840_35287_-	YjbQ family protein	NA	NA	NA	NA	NA
WP_002287922.1|36259_37834_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_002287920.1|38850_39531_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	7.6e-127
WP_072387101.1|39611_40019_-	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
WP_001079938.1|39991_40564_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
WP_001096887.1|40839_41634_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_000627290.1|41726_42269_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_001255866.1|42265_43174_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000662263.1|43206_43941_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_000228166.1|43921_44791_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000567888.1|44893_45139_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_001038792.1|46432_47170_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	7.0e-134
WP_001814874.1|47294_47378_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001015311.1|48064_48745_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_002296840.1|49311_50499_+|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_000143686.1|50788_51436_+	type A-8 chloramphenicol O-acetyltransferase	NA	A0A1X9I6V6	Streptococcus_phage	57.2	4.3e-71
WP_002340414.1|51750_52149_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_002287920.1|52570_53251_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	7.6e-127
WP_000997689.1|53866_54907_-	replication initiator protein A	NA	NA	NA	NA	NA
WP_000796719.1|55255_55582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311905.1|55568_56372_-	ParA family protein	NA	H7BUL8	unidentified_phage	35.7	3.6e-27
WP_000026576.1|56724_57015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021554.1|57150_57330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000568378.1|57326_57677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000969590.1|57669_58995_-	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	44.0	6.3e-101
WP_001261742.1|59444_60059_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	30.9	3.8e-16
>prophage 2
NC_017962	Enterococcus faecium DO plasmid 2, complete sequence	66247	63653	65740	66247	transposase	Streptococcus_phage(100.0%)	2	NA	NA
WP_001015311.1|63653_64334_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_001096887.1|64945_65740_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
>prophage 1
NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	251926	35249	58385	251926	transposase	Streptococcus_phage(37.5%)	24	NA	NA
WP_000997695.1|35249_36428_-|transposase	IS256-like element ISEf1 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.6	3.0e-30
WP_002290397.1|37207_37462_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002290394.1|37462_37780_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002390052.1|38338_39265_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297422.1|39374_39638_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_002305108.1|39637_39910_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_002390051.1|39986_40199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002390049.1|40211_40892_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.6	9.4e-109
WP_002390046.1|41591_42335_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	36.3	3.4e-35
WP_002390044.1|42334_43759_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_002311511.1|44153_44996_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_002298377.1|45320_45737_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002298375.1|45733_46204_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002298373.1|46217_46991_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002298371.1|47004_47817_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002322451.1|47870_48836_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002330554.1|48972_51696_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_002311505.1|51708_52341_+	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	28.4	1.0e-08
WP_002296127.1|53106_54654_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	28.9	1.7e-44
WP_002287659.1|54755_55109_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	38.7	5.7e-17
WP_002285758.1|55098_55293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322453.1|55592_56420_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002390042.1|56442_57126_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.2	9.4e-125
WP_002285820.1|57179_58385_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	30.7	2.5e-35
>prophage 2
NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	251926	79098	134652	251926	integrase,transposase	Streptococcus_phage(33.33%)	41	98686:98712	103143:103169
WP_002331383.1|79098_79779_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	5.8e-127
WP_002289583.1|80168_82013_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002289584.1|82068_83535_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_002289586.1|83571_84414_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002389992.1|88500_89460_+|transposase	IS30-like element IS6770 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.4	5.1e-36
WP_002343830.1|89456_90335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164927926.1|90947_92110_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.9	1.0e-78
WP_002287870.1|93288_93807_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_002287871.1|94210_95380_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002349114.1|95617_96478_+	Rossmann-like and DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_002287874.1|96489_97317_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_002287875.1|97331_98180_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_002287876.1|98189_98585_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
98686:98712	attL	CAGACTGTAGACAAAGTCCATTTTATG	NA	NA	NA	NA
WP_025481469.1|99589_99886_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0C5AEB1	Paenibacillus_phage	59.2	5.1e-19
WP_002287879.1|100088_102056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014748775.1|102058_102709_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	34.4	2.3e-24
WP_002285758.1|103893_104088_+	hypothetical protein	NA	NA	NA	NA	NA
103143:103169	attR	CATAAAATGGACTTTGTCTACAGTCTG	NA	NA	NA	NA
WP_014748777.1|104077_104461_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	38.7	6.2e-17
WP_002296127.1|104532_106080_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	28.9	1.7e-44
WP_014748778.1|106207_107503_-|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.5	1.5e-43
WP_014748779.1|107697_108990_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	41.5	2.5e-33
WP_002301131.1|109417_110152_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002301130.1|110167_111337_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002301128.1|111352_112348_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002298736.1|112426_113353_+	PEP phosphonomutase	NA	NA	NA	NA	NA
WP_002330944.1|113371_114622_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002389951.1|114840_115794_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	5.6e-35
WP_014748780.1|116004_117300_-|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.8	6.9e-44
WP_002389920.1|118934_120020_-	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_002295743.1|120689_121598_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002390200.1|122940_124398_-	arylsulfatase	NA	NA	NA	NA	NA
WP_002390201.1|124716_125532_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002364110.1|125518_126331_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002390202.1|126352_126670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002390204.1|126920_127328_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002364114.1|127350_127830_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_002364115.1|127833_129612_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_025186461.1|129731_130436_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002390206.1|130516_131629_+	SPASM domain-containing protein	NA	NA	NA	NA	NA
WP_002390209.1|131625_132402_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_014748778.1|133356_134652_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.5	1.5e-43
>prophage 3
NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	251926	141361	211309	251926	integrase,transposase	Streptococcus_phage(31.58%)	47	184400:184459	187350:187517
WP_014748795.1|141361_142636_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.4	1.3e-55
WP_032494987.1|142690_144256_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.6	2.4e-19
WP_002288609.1|144614_145547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288608.1|145586_147248_-	hyaluronate lyase	NA	NA	NA	NA	NA
WP_002288607.1|147244_150226_-	glycoside hydrolase family 42	NA	L0N6M2	Herpes_simplex_virus	28.8	1.3e-122
WP_002288601.1|150353_152267_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_002288600.1|152296_152908_-	DUF624 domain-containing protein	NA	NA	NA	NA	NA
WP_010729380.1|152958_154431_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002289655.1|154454_155366_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002289657.1|155377_156316_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002289659.1|156544_158119_+	histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.0	9.4e-11
WP_014748796.1|159206_160481_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.6	7.0e-57
WP_014748797.1|162040_163336_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.5	1.2e-43
WP_002299919.1|163434_163764_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_002299921.1|163753_164026_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_002389938.1|164476_165280_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_002299925.1|165257_166382_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.2	1.0e-22
WP_002299926.1|166397_167213_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_014748799.1|167202_168093_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002389936.1|168159_169449_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002298085.1|173589_174966_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002298083.1|174965_175622_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	1.3e-22
WP_002301194.1|175631_176909_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_111944785.1|177158_178320_+|transposase	IS3-like element ISEfa8 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	1.8e-80
WP_002298088.1|178944_179487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002389951.1|181882_182836_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	5.6e-35
WP_002288845.1|182832_183432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295743.1|183637_184546_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
184400:184459	attL	GAAAAATTAGGTTGTCAAAATTTCAACTCACGTTCTGTTAAAGGGCTAGAGAGTAGATTT	NA	NA	NA	NA
WP_002301108.1|184732_185287_-|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_165442593.1|185791_187258_-|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.2	3.1e-125
WP_143350988.1|188083_189245_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
187350:187517	attR	GAAAAATTAGGTTGTCAAAATTTCAACTCACGTTCTGTTAAAGGGCTAGAGAGTAGATTTGAAAGCATATTACTGGCTTACAGTGTTCTATTAAGTCGAGCACAACGACGTTTTGAAGGAACTTTGAGATATTCTTTAGGATATTAAAATTAACTAGCACCACGGGTA	NA	NA	NA	NA
WP_002289249.1|189752_191048_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.2	7.4e-54
WP_002289250.1|191255_191732_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002289252.1|191744_193247_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002289253.1|193260_193950_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_002289254.1|194110_194929_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014748810.1|195928_197224_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.5	6.9e-44
WP_014748811.1|197403_198276_-	ROK family protein	NA	NA	NA	NA	NA
WP_002305939.1|198503_199463_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.9	4.5e-32
WP_002389917.1|200428_200860_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002389916.1|200882_202037_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002389915.1|202058_203975_-	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	H8ZJ31	Ostreococcus_tauri_virus	24.1	4.3e-18
WP_002389914.1|203967_204945_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA	NA
WP_134789279.1|204994_205816_-	5-deoxy-glucuronate isomerase	NA	NA	NA	NA	NA
WP_002389911.1|205887_207255_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	36.5	5.4e-71
WP_002389909.1|207223_210313_-	alpha-mannosidase	NA	NA	NA	NA	NA
WP_002389907.1|210355_211309_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.8	1.1e-33
