The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	117455	123980	2903106	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|117455_117908_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|117913_118249_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|118465_118894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732220.1|118905_119322_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
WP_014600375.1|119599_119989_+	DUF5072 family protein	NA	NA	NA	NA	NA
WP_003721744.1|120001_120514_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|120561_120864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009911444.1|120905_121310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014600377.1|121296_123165_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003721748.1|123161_123980_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	4.2e-39
>prophage 2
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	1105881	1113304	2903106		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1105881_1106265_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_014600722.1|1106286_1107270_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	35.3	3.1e-12
WP_014930875.1|1107284_1108298_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	6.0e-11
WP_003721509.1|1108506_1109997_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_003727000.1|1110008_1110833_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_014600724.1|1110845_1111154_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003732712.1|1111214_1111619_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_014600725.1|1111747_1113304_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
>prophage 3
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	1244575	1304016	2903106	tRNA,protease	Bacillus_virus(16.67%)	58	NA	NA
WP_014600789.1|1244575_1245715_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1245795_1246191_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1246341_1246557_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010989719.1|1246675_1247209_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1247226_1247892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014600790.1|1248153_1249092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1249206_1250490_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1250674_1251934_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_009924620.1|1252052_1252619_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_009924619.1|1252653_1253223_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1253324_1253867_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1253876_1254740_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003723891.1|1254736_1255522_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723892.1|1255655_1256516_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_014600791.1|1256787_1258866_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	4.1e-107
WP_009924616.1|1258928_1260233_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_009911635.1|1260515_1261418_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1261438_1261978_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_010989722.1|1261991_1263401_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.7	4.9e-43
WP_003726695.1|1263421_1264201_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003724129.1|1264303_1264723_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1264744_1265056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009932949.1|1265058_1265931_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_014600792.1|1265972_1266569_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1266726_1267134_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1267314_1269282_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_010989723.1|1269278_1271738_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	4.7e-102
WP_009913867.1|1271820_1272288_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_014600793.1|1272614_1274348_+	LapB repeat-containing protein	NA	NA	NA	NA	NA
WP_012951575.1|1274679_1276476_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_012951576.1|1276509_1278378_-	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_003723737.1|1278590_1279289_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	1.3e-12
WP_003723738.1|1279521_1281198_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_014600794.1|1281323_1282241_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1282363_1282597_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_022741839.1|1282707_1283931_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010989728.1|1283923_1285150_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1285353_1285722_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1285792_1287127_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_014600796.1|1287270_1288566_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	61.6	2.4e-145
WP_003723437.1|1288609_1289131_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1289161_1289776_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003723439.1|1289933_1290263_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723440.1|1290354_1290582_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003732809.1|1290728_1292723_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1292943_1293183_+	YneF family protein	NA	NA	NA	NA	NA
WP_014600797.1|1293233_1294076_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_014600798.1|1294094_1294826_-	methyltransferase domain-containing protein	NA	A0A1X9I6N4	Streptococcus_phage	58.7	4.4e-80
WP_003723445.1|1294847_1295354_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	4.0e-56
WP_003723446.1|1295363_1296668_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	9.5e-134
WP_010989732.1|1296657_1297863_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	47.1	4.9e-92
WP_003723448.1|1297840_1298215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1298507_1299236_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1299235_1299793_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_014600799.1|1300022_1300781_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_014600800.1|1300794_1301583_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_014600801.1|1301597_1302740_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003723454.1|1302753_1304016_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 4
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	1794679	1802965	2903106		Prochlorococcus_phage(33.33%)	8	NA	NA
WP_014600928.1|1794679_1795246_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	39.1	1.3e-26
WP_014600929.1|1795242_1796292_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	8.3e-64
WP_003722245.1|1796310_1797738_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_014600930.1|1797722_1799942_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.2	1.0e-159
WP_003733240.1|1799934_1800618_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1800621_1800867_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003733239.1|1800878_1801592_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.7	2.7e-42
WP_014600931.1|1801672_1802965_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	5.5e-17
>prophage 5
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	2320131	2357411	2903106	plate,terminase,holin,portal,capsid,tail	Listeria_phage(100.0%)	50	NA	NA
WP_014601066.1|2320131_2320365_-	hypothetical protein	NA	A0A059T6E1	Listeria_phage	94.8	6.1e-36
WP_014601067.1|2320621_2321545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723292.1|2322067_2322667_-	N-acetyltransferase	NA	Q9T197	Listeria_phage	100.0	1.0e-111
WP_003733956.1|2322653_2322830_-	hypothetical protein	NA	Q9T198	Listeria_phage	100.0	6.3e-25
WP_014601068.1|2323068_2323920_-	M15 family metallopeptidase	NA	A0A059T7Y8	Listeria_phage	95.4	2.1e-142
WP_003722522.1|2323919_2324201_-|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.4e-41
WP_014601069.1|2324213_2324579_-	hypothetical protein	NA	Q9T1A0	Listeria_phage	97.9	3.7e-11
WP_003722524.1|2324607_2324766_-	hypothetical protein	NA	Q9T1A1	Listeria_phage	100.0	6.0e-19
WP_014601070.1|2324770_2325088_-	hypothetical protein	NA	Q9T1A2	Listeria_phage	94.3	1.9e-51
WP_014601071.1|2325099_2326173_-|plate	phage baseplate upper protein	plate	Q9T1A3	Listeria_phage	96.9	7.4e-193
WP_014601072.1|2326172_2327201_-	hypothetical protein	NA	Q9T1A4	Listeria_phage	97.4	9.0e-188
WP_014601073.1|2327201_2328227_-|tail	phage tail protein	tail	Q9T1A5	Listeria_phage	91.5	9.9e-187
WP_014601074.1|2328235_2329054_-|tail	phage tail family protein	tail	Q9T1A6	Listeria_phage	96.7	7.5e-153
WP_014601075.1|2329055_2334419_-	tape measure protein	NA	A0A0B5CU25	Listeria_phage	86.0	0.0e+00
WP_014601076.1|2334429_2335032_-	bacteriophage Gp15 family protein	NA	A8ASK5	Listeria_phage	98.5	5.4e-108
WP_014601077.1|2335037_2335460_-|tail	phage tail assembly chaperone	tail	A8ASK4	Listeria_phage	70.0	2.6e-48
WP_014601078.1|2335514_2335754_-	Ig-like domain-containing protein	NA	A8ASK3	Listeria_phage	89.9	5.2e-30
WP_014601079.1|2335776_2336214_-	hypothetical protein	NA	A0A059T6D6	Listeria_phage	99.3	1.6e-77
WP_014601080.1|2336216_2336624_-	hypothetical protein	NA	A0A0B5CU21	Listeria_phage	97.8	1.3e-65
WP_014601081.1|2336623_2336962_-|capsid	minor capsid protein	capsid	Q9T1B3	Listeria_phage	98.2	3.2e-57
WP_014601082.1|2336961_2337324_-	hypothetical protein	NA	A0A0B5D151	Listeria_phage	95.0	1.5e-60
WP_003734946.1|2337323_2337719_-	hypothetical protein	NA	A0A059T5E3	Listeria_phage	100.0	5.1e-67
WP_014601083.1|2337737_2338739_-	hypothetical protein	NA	A0A059T6D4	Listeria_phage	99.7	2.8e-186
WP_014601084.1|2338738_2339329_-	phage scaffolding protein	NA	Q9T1B8	Listeria_phage	91.5	7.7e-75
WP_014601085.1|2339407_2340547_-|capsid	phage minor capsid protein	capsid	A0A0B5D147	Listeria_phage	96.6	1.9e-202
WP_014601086.1|2340552_2342043_-|portal	phage portal protein	portal	Q9T1C0	Listeria_phage	99.6	3.3e-284
WP_014601087.1|2342055_2343387_-|terminase	PBSX family phage terminase large subunit	terminase	Q9T1C1	Listeria_phage	100.0	2.2e-263
WP_014601088.1|2343355_2343898_-|terminase	terminase small subunit	terminase	Q9T1C2	Listeria_phage	100.0	2.6e-93
WP_014601089.1|2343981_2344692_-	hypothetical protein	NA	Q9T152	Listeria_phage	100.0	4.8e-124
WP_014601090.1|2345058_2345493_-	hypothetical protein	NA	A8ASQ1	Listeria_phage	98.6	1.6e-74
WP_003727776.1|2345511_2345676_-	hypothetical protein	NA	A8ASQ0	Listeria_phage	92.6	2.5e-20
WP_039393275.1|2345723_2346254_-	hypothetical protein	NA	A0A059T5F9	Listeria_phage	96.0	8.4e-97
WP_014601092.1|2346250_2346502_-	hypothetical protein	NA	A0A059T6G3	Listeria_phage	91.6	1.9e-35
WP_014601093.1|2346498_2347425_-	DnaD domain-containing protein	NA	A8ATY7	Listeria_phage	89.0	5.7e-149
WP_010991173.1|2347444_2348260_-	recombinase RecT	NA	A8ATY6	Listeria_phage	98.9	3.5e-150
WP_014601094.1|2348259_2349219_-	YqaJ viral recombinase family protein	NA	A8ATY5	Listeria_phage	98.4	3.0e-177
WP_003722564.1|2349451_2349640_-	hypothetical protein	NA	Q9T175	Listeria_phage	82.3	1.8e-22
WP_014601095.1|2349748_2349964_-	hypothetical protein	NA	Q9T176	Listeria_phage	91.5	2.8e-27
WP_014601096.1|2349960_2350494_-	hypothetical protein	NA	A0A059T5F0	Listeria_phage	89.0	2.7e-79
WP_014601097.1|2350615_2351395_-	phage antirepressor Ant	NA	A8ASM6	Listeria_phage	96.1	1.7e-138
WP_014601098.1|2351376_2351652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014601099.1|2351657_2351939_-	hypothetical protein	NA	A8ATX8	Listeria_phage	100.0	1.4e-39
WP_014601100.1|2351964_2352249_-	hypothetical protein	NA	A0A0B5D168	Listeria_phage	88.3	9.2e-42
WP_014601101.1|2352260_2352455_-	hypothetical protein	NA	A0A059T6E5	Listeria_phage	93.8	5.3e-25
WP_003731437.1|2352487_2352691_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014601102.1|2352859_2353336_+	XRE family transcriptional regulator	NA	A8ASM2	Listeria_phage	62.0	2.2e-40
WP_014601103.1|2353493_2353661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003734807.1|2353709_2354246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012951969.1|2354477_2355992_+	putative DNA binding domain-containing protein	NA	NA	NA	NA	NA
WP_003722572.1|2356052_2357411_+	recombinase family protein	NA	Q8LTD8	Listeria_phage	98.9	2.3e-255
>prophage 6
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	2501012	2508856	2903106		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2501012_2501984_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2501991_2502960_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_010990001.1|2502961_2503837_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	3.2e-08
WP_014601136.1|2503944_2505675_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	4.3e-174
WP_003734087.1|2505716_2506778_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014601137.1|2506794_2507778_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	37.2	1.6e-48
WP_003722610.1|2507896_2508856_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 7
NC_017544	Listeria monocytogenes 10403S, complete sequence	2903106	2796250	2806282	2903106		Tupanvirus(33.33%)	6	NA	NA
WP_014601215.1|2796250_2798404_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.1	6.7e-44
WP_014601216.1|2798427_2800200_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.1	1.1e-79
WP_003722118.1|2800360_2801827_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
WP_003722119.1|2802112_2802643_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	49.3	2.6e-29
WP_014601217.1|2802700_2804311_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.9	7.5e-48
WP_003725314.1|2804827_2806282_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
