The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_016445	Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete sequence	3031375	51695	123671	3031375	tRNA,protease,transposase,integrase	uncultured_virus(27.27%)	56	45711:45726	107052:107067
45711:45726	attL	ATTTTGGTGGTTGATC	NA	NA	NA	NA
WP_000146472.1|51695_52883_+|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000898882.1|52950_54396_-	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA	NA
WP_001044323.1|54493_55519_-	porin OmpU	NA	NA	NA	NA	NA
WP_001883448.1|56073_56547_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_001054291.1|56623_56920_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_000043220.1|57039_57669_+	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA	NA
WP_001107450.1|57778_59725_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	A0A0P0BXI2	Ostreococcus_lucimarinus_virus	44.4	2.3e-120
WP_000913082.1|59791_60628_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.6	3.2e-18
WP_001281065.1|60653_61994_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_000495557.1|62250_62586_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000147148.1|63016_63472_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_000031601.1|63490_64978_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000192207.1|65002_67699_+	translation initiation factor IF-2	NA	NA	NA	NA	NA
WP_001123656.1|67800_68199_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000124044.1|68198_69137_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000055654.1|69278_69548_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_000462070.1|69910_72040_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_001883460.1|72155_73067_+	lipoprotein NlpI	NA	NA	NA	NA	NA
WP_000887847.1|73165_73573_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000981941.1|73619_74957_+	sodium-coupled multidrug efflux MATE transporter VcrM	NA	NA	NA	NA	NA
WP_000872504.1|75009_75888_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_000421327.1|75899_76913_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_001111411.1|77020_79075_-	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA	NA
WP_000932672.1|79307_79835_+	SCP2 domain-containing protein	NA	NA	NA	NA	NA
WP_000908540.1|79818_80322_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	32.2	1.7e-19
WP_000953212.1|80432_80840_+	DNA polymerase III subunit psi	NA	NA	NA	NA	NA
WP_000214238.1|80836_81286_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_000160066.1|81274_83332_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.3	6.9e-14
WP_001910883.1|83535_83634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127615.1|84072_84261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000211147.1|84406_86425_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_001218618.1|86554_87796_-|integrase	integrase family protein	integrase	A0A291AWU1	Escherichia_phage	39.8	1.3e-76
WP_001995600.1|87797_88067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497807.1|88069_89044_-	ParM/StbA family protein	NA	NA	NA	NA	NA
WP_000348524.1|89508_89952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985631.1|92125_95104_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_001120888.1|95521_97015_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_001447541.1|97045_97930_+	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
WP_000214119.1|98146_99361_+	chloramphenicol/florfenicol efflux MFS transporter FloR	NA	S4TR35	Salmonella_phage	28.7	4.2e-19
WP_001255015.1|99388_99694_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000480968.1|100316_101153_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
WP_001082316.1|101152_101956_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	Q75ZG1	Hepacivirus	34.3	3.8e-24
WP_001043260.1|102016_102832_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA	NA
WP_001122813.1|104646_105858_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	51.4	4.2e-51
WP_001883756.1|106571_106841_-	hypothetical protein	NA	A0A218MNF2	uncultured_virus	76.3	9.3e-28
WP_000116661.1|106848_107298_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A218MND2	uncultured_virus	57.1	4.1e-36
107052:107067	attR	GATCAACCACCAAAAT	NA	NA	NA	NA
WP_000182836.1|107296_107554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000196209.1|107937_108843_+	DNA polymerase III subunit epsilon	NA	A0A2H4P6W5	Pseudomonas_phage	26.4	3.1e-06
WP_000284114.1|108930_109230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000180270.1|109547_110468_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_000653856.1|110485_111286_+	DUF1819 family protein	NA	NA	NA	NA	NA
WP_001115853.1|111269_111818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000152592.1|111830_115520_+	BREX system P-loop protein BrxC	NA	NA	NA	NA	NA
WP_000779609.1|115524_119265_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA	NA
WP_000567536.1|119277_121581_+	PglZ domain-containing protein	NA	NA	NA	NA	NA
WP_000279702.1|121619_123671_+|protease	protease Lon-related BREX system protein BrxL	protease	NA	NA	NA	NA
>prophage 2
NC_016445	Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete sequence	3031375	278697	285890	3031375		Faustovirus(16.67%)	9	NA	NA
WP_000775253.1|278697_279912_+	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
WP_000331703.1|279948_280332_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_000301571.1|280392_280716_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
WP_001105747.1|280764_281280_+	co-chaperone HscB	NA	NA	NA	NA	NA
WP_001196560.1|281303_283154_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	5.3e-106
WP_001124187.1|283167_283506_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_000872176.1|283554_283749_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_000107237.1|283968_285258_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.3	1.7e-34
WP_001162850.1|285461_285890_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
>prophage 3
NC_016445	Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete sequence	3031375	1041237	1057901	3031375	coat,transposase	Vibrio_phage(44.44%)	21	NA	NA
WP_000593523.1|1041237_1041612_-	cholera enterotoxin binding subunit CtxB	NA	B9V4E7	Vibrio_virus	100.0	1.0e-64
WP_001881225.1|1041608_1042385_-	cholera enterotoxin catalytic subunit CtxA	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
WP_000021616.1|1042490_1043690_-	zonula occludens toxin ZOT	NA	A0A142I6Z1	Vibrio_phage	100.0	5.3e-240
WP_000979342.1|1043686_1043980_-	accessory cholera enterotoxin	NA	A0A0F6YNQ7	Vibrio_phage	100.0	3.7e-46
WP_001268534.1|1043976_1045164_-|coat	minor coat protein pIII	coat	A0A142I701	Vibrio_phage	100.0	1.4e-200
WP_000493022.1|1045270_1045519_-	colonization factor	NA	A0A0N7F140	Vibrio_phage	100.0	8.8e-33
WP_000842207.1|1045654_1046011_-	hypothetical protein	NA	A0A0N9HJ67	Vibrio_phage	100.0	9.7e-65
WP_000743997.1|1046012_1047092_-	replication initiation factor domain-containing protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
WP_000693566.1|1047217_1047556_+	helix-turn-helix transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
WP_000053920.1|1048067_1048292_-	RstC protein	NA	U5TMI6	Satellite_phage	100.0	1.1e-34
WP_001911551.1|1048385_1048736_-	hypothetical protein	NA	U5TMH5	Satellite_phage	100.0	1.0e-63
WP_000743997.1|1048737_1049817_-	replication initiation factor domain-containing protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
WP_000693566.1|1049942_1050281_+	helix-turn-helix transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
WP_000170634.1|1050770_1051355_-	DNA-binding protein	NA	E3U9I9	Vibrio_phage	100.0	6.4e-114
WP_001161489.1|1051347_1051515_-	hypothetical protein	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
WP_001052673.1|1051592_1052285_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000512956.1|1052414_1052684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002003155.1|1052703_1054269_-	replication protein	NA	A7BJY2	Enterobacteria_phage	32.3	3.9e-57
WP_000005769.1|1054445_1054997_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_156991674.1|1055341_1056527_+|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
WP_001122813.1|1056689_1057901_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	51.4	4.2e-51
>prophage 4
NC_016445	Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete sequence	3031375	1892933	1899550	3031375		Staphylococcus_phage(66.67%)	7	NA	NA
WP_000864130.1|1892933_1893404_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
WP_001122865.1|1893668_1894778_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
WP_000493874.1|1894818_1895472_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
WP_001131994.1|1895476_1896580_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.1	1.3e-43
WP_000543544.1|1896605_1897055_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_000366574.1|1897154_1898405_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
WP_000210573.1|1898416_1899550_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
>prophage 5
NC_016445	Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete sequence	3031375	2973389	2980613	3031375		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_000698379.1|2973389_2974142_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
WP_000002982.1|2974134_2974761_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
WP_000177568.1|2974760_2975696_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
WP_000116737.1|2975769_2976777_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
WP_001894770.1|2976869_2979458_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
WP_001279365.1|2979725_2980613_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
