assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000165775.1_ASM16577v3	NC_018528	Lactobacillus helveticus R0052, complete sequence	1	580774-583071	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	c2c9_V-U4,cas14j,cas3,csa3,cas2,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,WYL,cas14k,RT,Cas14u_CAS-V	Type I-U, Type I-U?,Type I-C	GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT,GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT,GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	33,33,34	34	TypeI-U,TypeI-U?,TypeI-C	c2c9_V-U4,cas14j,cas3,csa3,cas2,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,WYL,cas14k,RT,Cas14u_CAS-V	NA,NA	NA|199aa|up_9|NC_018528.1_568592_569189_+	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART)	NA|514aa|up_8|NC_018528.1_569190_570732_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|420aa|up_7|NC_018528.1_570744_572004_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	cas3|845aa|up_6|NC_018528.1_572505_575040_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|248aa|up_5|NC_018528.1_575054_575798_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|658aa|up_4|NC_018528.1_575797_577771_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|284aa|up_3|NC_018528.1_577773_578625_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|219aa|up_2|NC_018528.1_578627_579284_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|up_1|NC_018528.1_579280_580312_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_018528.1_580321_580612_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|888aa|down_0|NC_018528.1_583669_586333_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|277aa|down_1|NC_018528.1_586341_587172_+	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|201aa|down_2|NC_018528.1_587168_587771_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|156aa|down_3|NC_018528.1_587773_588241_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|444aa|down_4|NC_018528.1_588243_589575_+	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair]	NA|303aa|down_5|NC_018528.1_589606_590515_+	PRK08939, PRK08939, primosomal protein DnaI; Reviewed	NA|645aa|down_6|NC_018528.1_590805_592740_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|124aa|down_7|NC_018528.1_592831_593203_+	COG3603, COG3603, Uncharacterized conserved protein [Function unknown]	NA|417aa|down_8|NC_018528.1_593209_594460_+	pfam04087, DUF389, Domain of unknown function (DUF389)	NA|178aa|down_9|NC_018528.1_596445_596979_+	PRK00028, infC, translation initiation factor IF-3; Reviewed
GCF_000165775.1_ASM16577v3	NC_018528	Lactobacillus helveticus R0052, complete sequence	2	1611227-1611406	2	PILER-CR	no	cas14j	c2c9_V-U4,cas14j,cas3,csa3,cas2,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,WYL,cas14k,RT,Cas14u_CAS-V	Unclear	ATGTGGGATTTGAACCCACGC	21	0	0	NA	NA	NA	2	2	TypeV	c2c9_V-U4,cas14j,cas3,csa3,cas2,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,WYL,cas14k,RT,Cas14u_CAS-V	NA,NA|143aa|down_1|NC_018528.1_1613416_1613845_-,NA|105aa|down_6|NC_018528.1_1618582_1618897_-	NA|177aa|up_9|NC_018528.1_1598244_1598775_+	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|443aa|up_8|NC_018528.1_1598787_1600116_+	PRK10720, PRK10720, uracil transporter; Provisional	NA|272aa|up_7|NC_018528.1_1600170_1600986_-	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR)	cas14j|408aa|up_6|NC_018528.1_1601040_1602264_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|359aa|up_5|NC_018528.1_1602564_1603641_-	pfam03217, SLAP, SLAP domain	NA|273aa|up_4|NC_018528.1_1603997_1604816_-	pfam17312, Helveticin_J, Bacteriocin helveticin-J	NA|179aa|up_3|NC_018528.1_1606272_1606809_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|591aa|up_2|NC_018528.1_1607210_1608983_-	PRK13977, PRK13977, myosin-cross-reactive antigen; Provisional	NA|171aa|up_1|NC_018528.1_1609092_1609605_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|489aa|up_0|NC_018528.1_1609612_1611079_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|167aa|down_0|NC_018528.1_1611574_1612075_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|143aa|down_1|NC_018528.1_1613416_1613845_-	NA	NA|66aa|down_2|NC_018528.1_1614059_1614257_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|103aa|down_3|NC_018528.1_1614745_1615054_-	pfam18862, ApeA_NTD1, ApeA N-terminal domain 1	NA|451aa|down_4|NC_018528.1_1615454_1616807_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|459aa|down_5|NC_018528.1_1617169_1618546_+	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC	NA|105aa|down_6|NC_018528.1_1618582_1618897_-	NA	NA|235aa|down_7|NC_018528.1_1619104_1619809_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|231aa|down_8|NC_018528.1_1619853_1620546_-	pfam06736, DUF1211, Protein of unknown function (DUF1211)	NA|307aa|down_9|NC_018528.1_1620612_1621533_-	PRK13055, PRK13055, putative lipid kinase; Reviewed
GCF_000165775.1_ASM16577v3	NC_018528	Lactobacillus helveticus R0052, complete sequence	3	1953579-1953731	2	CRISPRCasFinder	no		c2c9_V-U4,cas14j,cas3,csa3,cas2,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,WYL,cas14k,RT,Cas14u_CAS-V	Orphan	TTTGAACAAAACACATCATATACCATATTAGTTCGAATATCAAACTATT	49	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas14j,cas3,csa3,cas2,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,WYL,cas14k,RT,Cas14u_CAS-V	NA,NA	NA|460aa|up_9|NC_018528.1_1946048_1947428_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|139aa|up_8|NC_018528.1_1947441_1947858_-	cd01288, FabZ, FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway	NA|157aa|up_7|NC_018528.1_1947862_1948333_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|410aa|up_6|NC_018528.1_1948336_1949566_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|244aa|up_5|NC_018528.1_1949587_1950319_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|306aa|up_4|NC_018528.1_1950318_1951236_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|81aa|up_3|NC_018528.1_1951245_1951488_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|328aa|up_2|NC_018528.1_1951546_1952530_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|156aa|up_1|NC_018528.1_1952526_1952994_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|149aa|up_0|NC_018528.1_1953023_1953470_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|280aa|down_0|NC_018528.1_1956358_1957198_+	PRK08072, PRK08072, carboxylating nicotinate-nucleotide diphosphorylase	NA|756aa|down_1|NC_018528.1_1958944_1961212_+	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|178aa|down_2|NC_018528.1_1962169_1962703_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|450aa|down_3|NC_018528.1_1964212_1965562_+	PRK07251, PRK07251, FAD-containing oxidoreductase	NA|280aa|down_4|NC_018528.1_1967252_1968092_-	PRK08072, PRK08072, carboxylating nicotinate-nucleotide diphosphorylase	NA|80aa|down_5|NC_018528.1_1971080_1971320_+	pfam13333, rve_2, Integrase core domain	NA|419aa|down_6|NC_018528.1_1971437_1972694_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|342aa|down_7|NC_018528.1_1974789_1975815_+	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|260aa|down_8|NC_018528.1_1975811_1976591_+	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|196aa|down_9|NC_018528.1_1976593_1977181_+	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP)
