The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_015174	Rubinisphaera brasiliensis DSM 5305, complete sequence	6006602	1708756	1743449	6006602	protease,tRNA,capsid,tail,terminase,portal,head	uncultured_Caudovirales_phage(20.0%)	36	NA	NA
WP_013627795.1|1708756_1709845_+|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_013627796.1|1710090_1711365_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
WP_013627797.1|1711832_1715033_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	28.4	9.0e-69
WP_013627798.1|1715046_1716912_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_013627799.1|1716908_1718483_-	type I restriction-modification system subunit M	NA	NA	NA	NA	NA
WP_013627800.1|1718628_1719015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627801.1|1719088_1719463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150106001.1|1719640_1720390_-	hypothetical protein	NA	A0A0C4UQZ7	Shigella_phage	46.2	1.9e-22
WP_013627803.1|1720340_1720931_-	ParB N-terminal domain-containing protein	NA	A0A1B1IPR0	uncultured_Mediterranean_phage	42.9	1.0e-26
WP_013627804.1|1720950_1721658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627805.1|1721820_1722561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041397932.1|1722707_1723583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041397934.1|1724825_1725029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041397936.1|1725065_1725278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013627807.1|1725839_1726442_+	DUF4357 domain-containing protein	NA	NA	NA	NA	NA
WP_013627808.1|1726457_1727300_-	LamG domain-containing protein	NA	NA	NA	NA	NA
WP_041397938.1|1727296_1729264_-	LamG domain-containing protein	NA	NA	NA	NA	NA
WP_150106002.1|1729327_1730479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627811.1|1730571_1731159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150106003.1|1731158_1731881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150106004.1|1732000_1733623_-	hypothetical protein	NA	S0A180	Cellulophaga_phage	32.6	8.1e-42
WP_041397940.1|1733800_1734022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627814.1|1734096_1734414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627815.1|1734413_1734827_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627816.1|1734875_1735358_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_013627817.1|1735354_1735753_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_013627818.1|1735749_1736073_-|head	phage head closure protein	head	A0A2H4JHK5	uncultured_Caudovirales_phage	34.9	2.3e-09
WP_013627819.1|1736072_1736603_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_041397943.1|1736602_1736785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627820.1|1736882_1737110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013627821.1|1737109_1738309_-|capsid	phage major capsid protein	capsid	A0A0F7L2V9	uncultured_marine_virus	31.8	1.4e-43
WP_013627822.1|1738460_1739039_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JDQ0	uncultured_Caudovirales_phage	34.6	1.7e-10
WP_013627823.1|1739035_1740559_-|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	32.2	3.3e-53
WP_013627824.1|1740612_1741389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013627825.1|1741374_1742922_-|terminase	terminase large subunit	terminase	A0A0U4B0M7	Pseudomonas_phage	27.5	5.9e-50
WP_169314886.1|1743011_1743449_-|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	32.6	5.4e-09
>prophage 2
NC_015174	Rubinisphaera brasiliensis DSM 5305, complete sequence	6006602	2306027	2314480	6006602	transposase	Paenibacillus_phage(50.0%)	10	NA	NA
WP_085997470.1|2306027_2306847_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_013626420.1|2307021_2307426_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	38.7	3.5e-18
WP_013626419.1|2307422_2307818_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_169314906.1|2307847_2308339_-|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	23.4	1.4e-05
WP_041398104.1|2308425_2308644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052299410.1|2308977_2309442_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_041398106.1|2309777_2309972_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150106034.1|2310740_2311730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013628289.1|2311776_2313615_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_085997471.1|2313660_2314480_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NC_015174	Rubinisphaera brasiliensis DSM 5305, complete sequence	6006602	3293391	3362888	6006602	protease,tRNA,transposase	Moumouvirus(10.0%)	56	NA	NA
WP_013629059.1|3293391_3294498_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_013629060.1|3294818_3295562_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_013629061.1|3295959_3297216_-	sulfate adenylyltransferase	NA	A0A2P1ELS9	Moumouvirus	25.5	1.3e-23
WP_013629062.1|3297400_3298447_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_013629063.1|3298702_3299500_+	sialate O-acetylesterase	NA	NA	NA	NA	NA
WP_041398339.1|3299514_3301158_-	DUF4332 domain-containing protein	NA	NA	NA	NA	NA
WP_013629065.1|3301554_3302241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013629066.1|3302431_3302974_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_169314928.1|3303290_3304187_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_013629068.1|3304344_3305736_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_013629069.1|3305744_3307718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041398342.1|3307755_3308667_-	formylmethanofuran--tetrahydromethanopterin N-formyltransferase	NA	NA	NA	NA	NA
WP_013629071.1|3308846_3309551_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_013629072.1|3310746_3311208_-	RidA family protein	NA	M1I5B0	Acanthocystis_turfacea_Chlorella_virus	44.8	1.1e-23
WP_013629073.1|3311401_3312955_+	PQQ-like beta-propeller repeat protein	NA	NA	NA	NA	NA
WP_013629074.1|3313025_3315254_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	32.8	5.1e-63
WP_013629075.1|3315338_3316310_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_013629076.1|3316476_3318213_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_013629077.1|3318399_3319005_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013629078.1|3319355_3320381_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_013629079.1|3320481_3321618_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_013629080.1|3321740_3322223_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_013629081.1|3322683_3322986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013629082.1|3323389_3325411_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_013629083.1|3325632_3326175_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA	NA
WP_013629084.1|3326254_3327484_-	glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_013629085.1|3327515_3328607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013629086.1|3328952_3329462_+	TIGR03546 family protein	NA	NA	NA	NA	NA
WP_013629087.1|3329568_3331518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052299652.1|3331786_3332815_+	dTDP-glucose 4,6-dehydratase	NA	K7QJG5	Escherichia_phage	43.8	4.5e-70
WP_013629089.1|3333021_3334332_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	39.9	6.5e-82
WP_081460475.1|3334647_3335667_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_041399728.1|3335938_3337051_+	DUF1080 domain-containing protein	NA	NA	NA	NA	NA
WP_150106066.1|3337187_3338369_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_013629093.1|3338451_3338835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041398348.1|3339226_3340402_-	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	NA	NA	NA	NA	NA
WP_013629095.1|3340480_3341707_+|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_013629096.1|3341905_3342976_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_013629097.1|3343257_3344223_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_013629098.1|3344308_3344620_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_013629099.1|3344932_3345622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013629100.1|3345758_3346763_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_013629101.1|3346826_3347807_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	34.0	2.8e-37
WP_013629102.1|3347831_3348731_+	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_013629103.1|3349003_3351553_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	33.3	1.2e-119
WP_150106241.1|3352269_3352752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013629106.1|3353119_3353440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013629107.1|3353733_3355014_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	49.8	3.4e-112
WP_013629108.1|3355096_3355993_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_013629109.1|3356173_3356614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013629110.1|3356811_3358251_+	serine/threonine protein kinase	NA	A0A0H4Y184	Salmon_gill_poxvirus	28.5	3.6e-17
WP_150106067.1|3358478_3359276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013629112.1|3359401_3360484_-	peptidase	NA	NA	NA	NA	NA
WP_013629113.1|3360707_3362018_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA	NA
WP_013626420.1|3362091_3362496_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	38.7	3.5e-18
WP_013626419.1|3362492_3362888_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
