The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	4381	60512	2130580	protease,tail,holin,head,terminase,tRNA,portal,capsid,integrase	Streptococcus_phage(87.5%)	56	23321:23341	59310:59330
WP_000163932.1|4381_4951_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000258110.1|4951_8461_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_001234978.1|8518_8785_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_000041909.1|8777_9146_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_001224747.1|9265_10534_+	serine hydrolase	NA	NA	NA	NA	NA
WP_001208981.1|10530_11808_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A7K9Y8	Acanthocystis_turfacea_chlorella_virus	24.1	2.5e-06
WP_000892184.1|11811_12354_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	28.9	2.7e-10
WP_000744551.1|12369_14328_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	H8ZJI5	Ostreococcus_tauri_virus	45.8	2.4e-109
WP_013315017.1|14449_14713_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000939546.1|21472_21709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205044.1|21939_23226_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	37.1	2.7e-72
23321:23341	attL	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
WP_000876727.1|23467_24616_-|integrase	site-specific integrase	integrase	A0A1S5SCM1	Streptococcus_phage	100.0	1.2e-217
WP_000539947.1|24786_25587_-	HIRAN domain-containing protein	NA	A0A1S5SDT5	Streptococcus_phage	99.6	1.1e-113
WP_000069476.1|25713_26469_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SD15	Streptococcus_phage	100.0	1.2e-141
WP_001171134.1|26642_26849_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SCX8	Streptococcus_phage	100.0	1.1e-31
WP_000289447.1|27156_27834_-	DUF4145 domain-containing protein	NA	A0A1S5SCM5	Streptococcus_phage	100.0	7.6e-127
WP_001002349.1|27888_28602_+	ORF6C domain-containing protein	NA	A0A1S5SCR9	Streptococcus_phage	100.0	1.4e-134
WP_000370959.1|28614_28872_+	hypothetical protein	NA	A0A1S5SEV6	Streptococcus_phage	100.0	1.2e-43
WP_000462823.1|28957_29278_+	hypothetical protein	NA	A0A1S5SCK7	Streptococcus_phage	100.0	1.9e-48
WP_000391814.1|29293_29587_+	hypothetical protein	NA	A0A1S5SCP4	Streptococcus_phage	100.0	3.1e-37
WP_001289767.1|29579_30407_+	phage replisome organizer N-terminal domain-containing protein	NA	A0A1S5SCN0	Streptococcus_phage	100.0	3.5e-150
WP_000511765.1|30394_30553_+	hypothetical protein	NA	A0A1S5SCK8	Streptococcus_phage	100.0	2.1e-24
WP_000228218.1|30546_31317_+	ATP-binding protein	NA	A0A1S5SD21	Streptococcus_phage	100.0	5.2e-140
WP_000470303.1|31331_31526_+	hypothetical protein	NA	A0A1S5SCY7	Streptococcus_phage	100.0	1.8e-28
WP_000891969.1|31525_31753_+	hypothetical protein	NA	A0A1S5SCL8	Streptococcus_phage	100.0	2.3e-40
WP_001105098.1|31937_32147_+	hypothetical protein	NA	A0A1S5SCS9	Streptococcus_phage	100.0	1.5e-28
WP_000969666.1|32118_32436_+	hypothetical protein	NA	A0A1S5SCY1	Streptococcus_phage	100.0	7.8e-58
WP_001859446.1|32869_33133_+	hypothetical protein	NA	A0A1S5SCL9	Streptococcus_phage	100.0	1.3e-42
WP_001177094.1|33370_33724_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SCQ5	Streptococcus_phage	100.0	1.4e-63
WP_000516820.1|33705_34170_+	hypothetical protein	NA	A0A1S5SCN9	Streptococcus_phage	100.0	4.9e-85
WP_001028147.1|34278_34821_+|integrase	site-specific integrase	integrase	A0A1S5SCL7	Streptococcus_phage	100.0	9.8e-101
WP_000143215.1|35250_35568_+	HNH endonuclease	NA	A0A1S5SD32	Streptococcus_phage	100.0	1.5e-56
WP_000601030.1|35704_36190_+	hypothetical protein	NA	A0A1S5SCZ6	Streptococcus_phage	99.4	5.0e-80
WP_000230006.1|36182_37895_+|terminase	terminase	terminase	A0A1S5SCM6	Streptococcus_phage	100.0	0.0e+00
WP_001812652.1|37903_39046_+|portal	phage portal protein	portal	A0A1S5SCP3	Streptococcus_phage	100.0	1.2e-217
WP_000413203.1|39092_39635_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1S5SCT6	Streptococcus_phage	100.0	1.2e-98
WP_000855224.1|39649_40903_+|capsid	phage major capsid protein	capsid	A0A1S5SCZ2	Streptococcus_phage	100.0	4.4e-229
WP_000154006.1|40928_41264_+	hypothetical protein	NA	A0A1S5SCM7	Streptococcus_phage	100.0	4.1e-57
WP_000842790.1|41260_41566_+|head,tail	head-tail adaptor protein	head,tail	A0A1S5SCR5	Streptococcus_phage	100.0	9.5e-37
WP_001074487.1|41565_41913_+	hypothetical protein	NA	A0A1S5SCP8	Streptococcus_phage	100.0	3.5e-59
WP_000534621.1|41899_42244_+	hypothetical protein	NA	A0A1S5SCM8	Streptococcus_phage	100.0	1.2e-59
WP_000221469.1|42257_42926_+	hypothetical protein	NA	A0A1S5SD39	Streptococcus_phage	100.0	7.0e-125
WP_000591561.1|42927_43404_+	hypothetical protein	NA	A0A1S5SD04	Streptococcus_phage	100.0	7.8e-86
WP_000852166.1|43590_46329_+|tail	phage tail tape measure protein	tail	A0A1S5SCN8	Streptococcus_phage	100.0	0.0e+00
WP_000161552.1|46325_47048_+|tail	phage tail protein	tail	A0A1S5SCQ3	Streptococcus_phage	100.0	3.6e-135
WP_013315019.1|47048_56156_+|tail	tail fiber domain-containing protein	tail	A0A1S5SCU8	Streptococcus_phage	100.0	0.0e+00
WP_001063633.1|56152_56269_+	hypothetical protein	NA	A0A1S5SCF0	Streptococcus_phage	100.0	4.0e-12
WP_001091114.1|56249_56453_+	hypothetical protein	NA	A0A1S5SCN6	Streptococcus_phage	100.0	2.9e-26
WP_000852253.1|56455_56806_+	hypothetical protein	NA	A0A1S5SCS3	Streptococcus_phage	100.0	6.2e-64
WP_001165344.1|56815_57232_+|holin	phage holin family protein	holin	A0A1S5SCE8	Streptococcus_phage	100.0	1.9e-67
WP_001186238.1|57235_57568_+|holin	phage holin	holin	A0A1S5SCN7	Streptococcus_phage	100.0	1.6e-50
WP_000350465.1|57571_58528_+	N-acetylmuramoyl-L-alanine amidase LytA	NA	A0A1S5SD48	Streptococcus_phage	100.0	4.3e-144
WP_001209433.1|58665_58845_-	hypothetical protein	NA	Q3BLW4	Phage_SK137	96.6	3.5e-23
WP_001030863.1|58986_59136_-	hypothetical protein	NA	C5J952	Streptococcus_phage	95.9	9.1e-17
WP_000291875.1|59415_59883_+	nucleoside deaminase	NA	NA	NA	NA	NA
59310:59330	attR	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
WP_000701993.1|60068_60512_+	dUTP diphosphatase	NA	Q2WG49	Clostridium_botulinum_D_phage	46.7	3.1e-28
>prophage 2
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	75777	87088	2130580		Synechococcus_phage(33.33%)	7	NA	NA
WP_000668281.1|75777_77931_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	1.4e-44
WP_000801606.1|77943_79293_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_000043305.1|79462_80170_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.0e-41
WP_000361232.1|80226_83952_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.8	2.8e-37
WP_000220625.1|84044_85487_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.9	2.2e-54
WP_000182582.1|85523_86546_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.6e-64
WP_000717501.1|86542_87088_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	9.7e-24
>prophage 3
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	108381	170684	2130580	tRNA,protease,bacteriocin	Streptococcus_phi-m46.1-like_phage(16.67%)	60	NA	NA
WP_001810309.1|108381_113952_+|protease	zinc metalloprotease ZmpC	protease	NA	NA	NA	NA
WP_000220734.1|114307_115162_+	VOC family protein	NA	NA	NA	NA	NA
WP_000200247.1|115267_115825_+	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_000615007.1|116041_116806_+	nucleoside phosphorylase	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	69.0	1.3e-58
WP_000897726.1|117418_118798_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_001283896.1|118811_119477_+	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_000692802.1|119611_119815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000771910.1|119876_120050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000291610.1|120116_120527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000671448.1|120642_122304_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA	NA
WP_000520642.1|122470_123169_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.0	2.0e-37
WP_000769768.1|123165_124218_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_000092756.1|124412_125024_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
WP_001810173.1|125684_125945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000058099.1|125898_126120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000714582.1|126438_127368_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_001075100.1|127381_128305_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_000800417.1|128408_129884_+	DUF3502 domain-containing protein	NA	NA	NA	NA	NA
WP_001030032.1|130155_131142_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_001140363.1|131263_132115_+	DUF4299 domain-containing protein	NA	NA	NA	NA	NA
WP_000808474.1|132195_133260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001233690.1|133322_134234_-	DUF4097 domain-containing protein	NA	NA	NA	NA	NA
WP_000198687.1|134226_134820_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000273863.1|134806_135133_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000744897.1|135271_136438_-	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_000096192.1|136495_137656_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_001035702.1|137694_139545_+	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	30.1	2.2e-27
WP_000200890.1|139804_140437_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000500038.1|140458_141331_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
WP_000838912.1|141339_142011_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA	NA
WP_000836442.1|142252_142840_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	56.2	1.7e-26
WP_001189291.1|142891_143212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001230165.1|143642_143930_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000724267.1|143981_146090_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571330.1|146086_146728_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	4.3e-23
WP_001038474.1|146934_147741_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001810313.1|147757_148954_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001107608.1|148982_150374_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_001268159.1|150560_151424_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000915346.1|151889_152228_+	peptidase C39	NA	NA	NA	NA	NA
WP_000424410.1|152205_152700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000909535.1|152853_153066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000513492.1|153545_153791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810315.1|153947_155006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810319.1|155320_156298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424474.1|156674_157049_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619748.1|157256_158159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000366642.1|158214_158454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072912.1|158450_159179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770312.1|160311_160551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810010.1|160535_160814_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	50.5	1.1e-20
WP_001035331.1|161099_163379_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282982.1|163779_164901_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193637.1|165041_165497_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|165506_167420_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331980.1|167614_169294_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639577.1|169295_169529_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000184676.1|169910_170132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974047.1|170344_170497_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
WP_000180803.1|170498_170684_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
>prophage 4
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	445208	508569	2130580	transposase,bacteriocin,protease,tRNA	Planktothrix_phage(11.11%)	56	NA	NA
WP_001809505.1|445208_445379_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000628994.1|446028_447252_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_001059630.1|447419_448742_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000836780.1|450799_451144_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000429427.1|451153_452566_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_000359732.1|452635_454312_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001809506.1|454437_455877_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691685.1|455880_457230_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|457418_458267_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403169.1|458281_458830_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693545.1|458836_459049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656536.1|459150_460833_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	4.5e-19
WP_001148103.1|460817_461648_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181374.1|461840_462344_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185835.1|462796_463360_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001813491.1|463373_464000_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867286.1|464027_464417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333649.1|464421_464871_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_000764656.1|464998_465586_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105242.1|465975_467583_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	8.9e-142
WP_000026628.1|468141_469773_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795162.1|470065_475006_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|475095_476292_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119905.1|476427_476955_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659547.1|477031_477388_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_001122900.1|477424_478771_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|478866_478986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001813510.1|480788_481394_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000651177.1|481404_482202_-	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.3e-21
WP_000029036.1|483825_485289_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229098.1|485301_487635_-	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	26.5	1.2e-25
WP_001088677.1|488241_488751_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255787.1|488914_489949_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|489975_490500_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|490979_492803_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000343113.1|492813_493218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066301.1|493561_494698_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.0	1.7e-22
WP_001810526.1|494726_494903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777760.1|495064_495352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278301.1|495361_495772_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889923.1|495839_496571_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653768.1|496567_497617_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132583.1|497784_498114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682136.1|498390_498729_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219137.1|498733_499471_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001099894.1|499484_500825_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000358812.1|500868_501024_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069065.1|501080_502442_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_000205159.1|502452_504606_-	peptide cleavage/export ABC transporter BlpA	NA	W8CYL7	Bacillus_phage	27.7	2.4e-41
WP_001093255.1|504887_505142_+|bacteriocin	two-peptide bacteriocin subunit BlpM	bacteriocin	NA	NA	NA	NA
WP_001099490.1|505157_505361_+|bacteriocin	two-peptide bacteriocin subunit BlpN	bacteriocin	NA	NA	NA	NA
WP_001809846.1|505604_505754_+|bacteriocin	bacteriocin-like peptide BlpO	bacteriocin	NA	NA	NA	NA
WP_000346296.1|505857_505977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810529.1|506444_506816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000877381.1|507444_507828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000760515.1|507879_508569_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 5
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	916926	926577	2130580	holin	Streptococcus_phage(88.89%)	11	NA	NA
WP_000728250.1|916926_918822_+|holin	phosphorylcholine esterase CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	23.7	5.6e-10
WP_075218898.1|918901_920032_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000254679.1|920041_921304_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	65.0	1.3e-140
WP_000689709.1|921307_922105_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.6	2.7e-59
WP_000033362.1|922324_922963_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	68.1	9.8e-76
WP_000806706.1|922959_923850_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
WP_000358228.1|923889_924207_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166869.1|924209_925079_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	2.3e-115
WP_001261449.1|925305_925824_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000345256.1|925932_926070_+	replication initiator protein A	NA	NA	NA	NA	NA
WP_013315084.1|926076_926577_+	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	40.0	5.2e-08
>prophage 6
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	1388433	1446116	2130580	transposase,holin,tRNA	Streptococcus_phage(23.53%)	60	NA	NA
WP_000691853.1|1388433_1388628_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001813431.1|1388824_1389148_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_001136122.1|1389128_1389314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000065723.1|1389617_1391180_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.4e-19
WP_000936187.1|1391321_1392020_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000071672.1|1392062_1392959_-	EamA family transporter	NA	NA	NA	NA	NA
WP_000872206.1|1392967_1393903_-	serine hydrolase	NA	NA	NA	NA	NA
WP_001102211.1|1393899_1394625_-	CppA family protein	NA	NA	NA	NA	NA
WP_000290657.1|1394708_1395344_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.7	8.7e-08
WP_000972931.1|1395345_1396173_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001272961.1|1397771_1398383_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855753.1|1398427_1399156_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272294.1|1399195_1400107_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	5.9e-90
WP_000926599.1|1400172_1400397_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590970.1|1400474_1401218_-	amino acid ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.4	1.6e-13
WP_001103449.1|1401217_1402018_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|1402175_1402532_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170346.1|1402544_1403057_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.6	1.3e-46
WP_000405832.1|1403056_1403551_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858730.1|1403685_1404132_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097986.1|1404128_1404776_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689945.1|1404796_1405378_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138529.1|1405378_1406254_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036793.1|1406405_1407785_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000175407.1|1408078_1409002_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915959.1|1409061_1409667_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	7.7e-54
WP_000673690.1|1409685_1410930_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	1.7e-55
WP_000371287.1|1411152_1411410_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_000164762.1|1411451_1413488_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038742.1|1413699_1414617_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_000429566.1|1414811_1415573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099678.1|1415845_1416688_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	1.3e-51
WP_001854799.1|1416801_1418193_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001810453.1|1418427_1418805_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
WP_000915887.1|1419019_1419997_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_000850585.1|1419993_1421076_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.3	1.8e-37
WP_001040724.1|1422571_1423768_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_001155321.1|1423931_1424885_-|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_000348126.1|1425922_1426792_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248992.1|1427015_1427537_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_001021423.1|1427494_1428601_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_000935666.1|1428711_1428966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088778989.1|1429305_1429752_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000121708.1|1430382_1432101_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.2	8.9e-273
WP_000434651.1|1432211_1432559_+	thioredoxin	NA	NA	NA	NA	NA
WP_000759193.1|1432837_1433674_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000891769.1|1433686_1434316_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.3	1.5e-28
WP_000120830.1|1434325_1434967_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_001065946.1|1435112_1436342_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_000435455.1|1436331_1437498_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000665619.1|1437641_1438655_+	lactonase family protein	NA	NA	NA	NA	NA
WP_000068050.1|1438699_1439119_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_000094360.1|1439129_1440536_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_000301210.1|1440621_1441500_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_000996644.1|1441515_1443021_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_000359036.1|1443035_1443572_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_000558554.1|1443571_1444066_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_000392848.1|1444079_1444796_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_001054562.1|1444830_1445031_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_013315128.1|1445105_1446116_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	34.3	1.2e-32
>prophage 7
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	1493724	1500475	2130580	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081010.1|1493724_1494690_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	99.2	4.8e-66
WP_000011306.1|1494723_1495635_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
WP_001231085.1|1495631_1496609_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	99.7	3.4e-184
WP_000163033.1|1496605_1497496_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
WP_001140412.1|1497547_1497928_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|1497938_1498526_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000106346.1|1498534_1499767_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
WP_000442275.1|1499798_1499969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162484.1|1499968_1500475_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	42.5	6.7e-27
>prophage 8
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	1754342	1761674	2130580		uncultured_Mediterranean_phage(33.33%)	9	NA	NA
WP_000167818.1|1754342_1755044_+	UDP-glucose 4-epimerase	NA	A0A2K9L1R4	Tupanvirus	36.1	1.2e-34
WP_000777248.1|1755466_1756426_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	4.0e-57
WP_001193661.1|1756415_1757372_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764303.1|1757368_1758121_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	5.6e-14
WP_000858252.1|1758216_1759182_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000821640.1|1759406_1759649_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
WP_001222228.1|1759648_1760371_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000105310.1|1760357_1760927_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
WP_000351907.1|1760945_1761674_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	5.3e-09
>prophage 9
NC_014494	Streptococcus pneumoniae AP200, complete sequence	2130580	2107207	2115961	2130580		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|2107207_2108047_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	27.6	1.1e-13
WP_000835721.1|2108031_2108859_-	energy-coupling factor transporter ATPase	NA	G3M9Y6	Bacillus_virus	31.8	3.1e-21
WP_000712132.1|2108855_2109401_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227958.1|2109411_2110233_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170183.1|2110274_2111558_-	insulinase family protein	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	30.0	1.4e-17
WP_000424272.1|2111554_2112805_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.3	2.7e-93
WP_000455903.1|2112963_2113332_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266666.1|2113334_2114432_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|2114482_2115961_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
