assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000143685.1_ASM14368v1	NC_014328	Clostridium ljungdahlii DSM 13528, complete sequence	1	2791988-2792177	1	PILER-CR	no		c2c10_CAS-V-U3,csa3,cas3,WYL,DEDDh,cas8b1,DinG,PD-DExK,cas3HD	Orphan	GAATAAGTGATTCACACCAAATCGAAGATTTGGGTTCTAATTTAGGTAACT	51	0	0	NA	NA	NA	2	2	Orphan	c2c10_CAS-V-U3,csa3,cas3,WYL,DEDDh,cas8b1,DinG,PD-DExK,cas3HD	NA|262aa|up_8|NC_014328.1_2784323_2785109_-,NA|153aa|down_7|NC_014328.1_2803525_2803984_-,NA|99aa|down_8|NC_014328.1_2804069_2804366_+	NA|228aa|up_9|NC_014328.1_2783178_2783862_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|262aa|up_8|NC_014328.1_2784323_2785109_-	NA	NA|232aa|up_7|NC_014328.1_2785108_2785804_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|123aa|up_6|NC_014328.1_2785806_2786175_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|151aa|up_5|NC_014328.1_2786361_2786814_-	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|224aa|up_4|NC_014328.1_2786995_2787667_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|125aa|up_3|NC_014328.1_2787846_2788221_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|509aa|up_2|NC_014328.1_2788232_2789759_+	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|368aa|up_1|NC_014328.1_2789835_2790939_-	pfam12671, Amidase_6, Putative amidase domain	NA|302aa|up_0|NC_014328.1_2791058_2791964_-	pfam13539, Peptidase_M15_4, D-alanyl-D-alanine carboxypeptidase	NA|379aa|down_0|NC_014328.1_2792694_2793831_+	COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]	NA|1069aa|down_1|NC_014328.1_2794062_2797269_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|355aa|down_2|NC_014328.1_2797312_2798377_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|334aa|down_3|NC_014328.1_2798391_2799393_-	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|301aa|down_4|NC_014328.1_2799684_2800587_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|208aa|down_5|NC_014328.1_2800633_2801257_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|723aa|down_6|NC_014328.1_2801308_2803477_-	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|153aa|down_7|NC_014328.1_2803525_2803984_-	NA	NA|99aa|down_8|NC_014328.1_2804069_2804366_+	NA	NA|172aa|down_9|NC_014328.1_2804442_2804958_-	pfam03802, CitX, Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GCF_000143685.1_ASM14368v1	NC_014328	Clostridium ljungdahlii DSM 13528, complete sequence	2	3533683-3533774	1	CRISPRCasFinder	no		c2c10_CAS-V-U3,csa3,cas3,WYL,DEDDh,cas8b1,DinG,PD-DExK,cas3HD	Orphan	ACCAATGATTGCTATAATAAATA	23	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,csa3,cas3,WYL,DEDDh,cas8b1,DinG,PD-DExK,cas3HD	NA|252aa|up_7|NC_014328.1_3526509_3527265_+,NA|99aa|up_1|NC_014328.1_3532052_3532349_+,NA|57aa|up_0|NC_014328.1_3532565_3532736_+,NA|147aa|down_1|NC_014328.1_3535589_3536030_+,NA|74aa|down_4|NC_014328.1_3537956_3538178_+	NA|327aa|up_9|NC_014328.1_3524788_3525769_+	cd12185, HGDH_LDH_like, Putative Lactate dehydrogenase and (R)-2-Hydroxyglutarate Dehydrogenase-like proteins, NAD-binding and catalytic domains	NA|76aa|up_8|NC_014328.1_3525889_3526117_-	pfam13031, DUF3892, Protein of unknown function (DUF3892)	NA|252aa|up_7|NC_014328.1_3526509_3527265_+	NA	NA|204aa|up_6|NC_014328.1_3527320_3527932_-	pfam06161, DUF975, Protein of unknown function (DUF975)	NA|407aa|up_5|NC_014328.1_3528125_3529346_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|187aa|up_4|NC_014328.1_3529391_3529952_-	cd03395, PAP2_like_4, PAP2_like_4 proteins	NA|119aa|up_3|NC_014328.1_3530334_3530691_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|139aa|up_2|NC_014328.1_3530779_3531196_+	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only]	NA|99aa|up_1|NC_014328.1_3532052_3532349_+	NA	NA|57aa|up_0|NC_014328.1_3532565_3532736_+	NA	NA|101aa|down_0|NC_014328.1_3534768_3535071_+	pfam07261, DnaB_2, Replication initiation and membrane attachment	NA|147aa|down_1|NC_014328.1_3535589_3536030_+	NA	NA|143aa|down_2|NC_014328.1_3536114_3536543_+	PRK10562, PRK10562, putative acetyltransferase; Provisional	NA|257aa|down_3|NC_014328.1_3536583_3537354_+	smart00650, rADc, Ribosomal RNA adenine dimethylases	NA|74aa|down_4|NC_014328.1_3537956_3538178_+	NA	NA|55aa|down_5|NC_014328.1_3538395_3538560_+	pfam12841, YvrJ, YvrJ protein family	NA|75aa|down_6|NC_014328.1_3538643_3538868_+	pfam07872, DUF1659, Protein of unknown function (DUF1659)	NA|102aa|down_7|NC_014328.1_3539175_3539481_-	pfam11667, DUF3267, Putative zincin peptidase	NA|300aa|down_8|NC_014328.1_3540174_3541074_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|113aa|down_9|NC_014328.1_3541788_3542127_-	COG4823, AbiF, Abortive infection bacteriophage resistance protein [Defense mechanisms]
GCF_000143685.1_ASM14368v1	NC_014328	Clostridium ljungdahlii DSM 13528, complete sequence	3	3581508-3581592	2	CRISPRCasFinder	no		c2c10_CAS-V-U3,csa3,cas3,WYL,DEDDh,cas8b1,DinG,PD-DExK,cas3HD	Orphan	CGGTTCGCATTGTTAAGAGGCGC	23	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,csa3,cas3,WYL,DEDDh,cas8b1,DinG,PD-DExK,cas3HD	NA|167aa|up_6|NC_014328.1_3568727_3569228_-,NA|89aa|down_4|NC_014328.1_3587259_3587526_-,NA|181aa|down_9|NC_014328.1_3591829_3592372_-	NA|126aa|up_9|NC_014328.1_3565881_3566259_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|82aa|up_8|NC_014328.1_3566255_3566501_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|677aa|up_7|NC_014328.1_3566677_3568708_-	TIGR02653, putative_ATP-dependent_Lon_protease, conserved hypothetical protein	NA|167aa|up_6|NC_014328.1_3568727_3569228_-	NA	NA|854aa|up_5|NC_014328.1_3569250_3571812_-	TIGR02687, conserved_hypothetical_protein, TIGR02687 family protein	NA|1181aa|up_4|NC_014328.1_3571876_3575419_-	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|1189aa|up_3|NC_014328.1_3575484_3579051_-	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|195aa|up_2|NC_014328.1_3579077_3579662_-	pfam08747, DUF1788, Domain of unknown function (DUF1788)	NA|203aa|up_1|NC_014328.1_3579742_3580351_-	pfam08849, DUF1819, Putative inner membrane protein (DUF1819)	NA|304aa|up_0|NC_014328.1_3580565_3581477_-	COG4823, AbiF, Abortive infection bacteriophage resistance protein [Defense mechanisms]	NA|344aa|down_0|NC_014328.1_3582089_3583121_-	COG1600, COG1600, Uncharacterized Fe-S protein [Energy production and conversion]	NA|214aa|down_1|NC_014328.1_3583220_3583862_-	pfam12654, DUF3786, Domain of unknown function (DUF3786)	NA|122aa|down_2|NC_014328.1_3584004_3584370_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|481aa|down_3|NC_014328.1_3585423_3586866_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|89aa|down_4|NC_014328.1_3587259_3587526_-	NA	NA|72aa|down_5|NC_014328.1_3587626_3587842_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|142aa|down_6|NC_014328.1_3588229_3588655_-	pfam11208, DUF2992, Protein of unknown function (DUF2992)	NA|383aa|down_7|NC_014328.1_3588831_3589980_-	cd17333, MFS_FucP_MFSD4_like, Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins	NA|515aa|down_8|NC_014328.1_3590235_3591780_-	pfam00221, Lyase_aromatic, Aromatic amino acid lyase	NA|181aa|down_9|NC_014328.1_3591829_3592372_-	NA
