assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000143085.1_ASM14308v1	NC_014315	Nitrosococcus watsonii C-113, complete sequence	1	1530982-1531073	1	CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD	DEDDh,c2c10_CAS-V-U3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD,cas14j,c2c9_V-U4,cas8f,cas5f,cas7f,cas6f	Type I-E	CTCGGTTCATCCCCACGCCTGTGGGGAACGG	31	0	0	NA	NA	I-E,II-B	1	1	TypeI-E	DEDDh,c2c10_CAS-V-U3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD,cas14j,c2c9_V-U4,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|220aa|up_9|NC_014315.1_1513460_1514120_-	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|759aa|up_8|NC_014315.1_1514520_1516797_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|431aa|up_7|NC_014315.1_1516879_1518172_+	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	NA|738aa|up_6|NC_014315.1_1518168_1520382_+	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ	NA|545aa|up_5|NC_014315.1_1521827_1523462_+	cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes	NA|200aa|up_4|NC_014315.1_1523488_1524088_+	PRK00884, PRK00884, Maf-like protein; Reviewed	NA|265aa|up_3|NC_014315.1_1524103_1524898_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|332aa|up_2|NC_014315.1_1525625_1526621_-	TIGR00557, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase	NA|427aa|up_1|NC_014315.1_1526642_1527923_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|739aa|up_0|NC_014315.1_1528003_1530220_-	PRK04423, PRK04423, LPS-assembly protein LptD	cas2|100aa|down_0|NC_014315.1_1531189_1531489_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|305aa|down_1|NC_014315.1_1531469_1532384_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|201aa|down_2|NC_014315.1_1532387_1532990_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|223aa|down_3|NC_014315.1_1532970_1533639_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|368aa|down_4|NC_014315.1_1533648_1534752_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|147aa|down_5|NC_014315.1_1534781_1535222_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|216aa|down_6|NC_014315.1_1535205_1535853_-	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cas8e|303aa|down_7|NC_014315.1_1535783_1536692_-	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cas3|600aa|down_8|NC_014315.1_1536688_1538488_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas3HD|173aa|down_9|NC_014315.1_1538409_1538928_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3
GCF_000143085.1_ASM14308v1	NC_014315	Nitrosococcus watsonii C-113, complete sequence	2	2056356-2056446	2	CRISPRCasFinder	no		DEDDh,c2c10_CAS-V-U3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD,cas14j,c2c9_V-U4,cas8f,cas5f,cas7f,cas6f	Orphan	GGCTGCAGTCTGCGCGCGTACGAGACAAAC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c10_CAS-V-U3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD,cas14j,c2c9_V-U4,cas8f,cas5f,cas7f,cas6f	NA|388aa|up_1|NC_014315.1_2054645_2055809_-,NA	NA|694aa|up_9|NC_014315.1_2044731_2046813_-	PRK11249, katE, hydroperoxidase II; Provisional	NA|46aa|up_8|NC_014315.1_2047482_2047620_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|644aa|up_7|NC_014315.1_2047848_2049780_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|249aa|up_6|NC_014315.1_2049869_2050616_-	cd05483, retropepsin_like_bacteria, Bacterial aspartate proteases, retropepsin-like protease family	NA|214aa|up_5|NC_014315.1_2050619_2051261_-	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases	NA|300aa|up_4|NC_014315.1_2051559_2052459_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|140aa|up_3|NC_014315.1_2052445_2052865_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|400aa|up_2|NC_014315.1_2052912_2054112_-	PRK08133, PRK08133, O-succinylhomoserine sulfhydrylase; Validated	NA|388aa|up_1|NC_014315.1_2054645_2055809_-	NA	NA|156aa|up_0|NC_014315.1_2055870_2056338_-	pfam12849, PBP_like_2, PBP superfamily domain	NA|268aa|down_0|NC_014315.1_2056455_2057259_-	TIGR03694, exosort_acyl, N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated	NA|119aa|down_1|NC_014315.1_2057947_2058304_-	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|100aa|down_2|NC_014315.1_2058284_2058584_-	PRK00285, ihfA, integration host factor subunit alpha; Reviewed	NA|793aa|down_3|NC_014315.1_2058587_2060966_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|341aa|down_4|NC_014315.1_2060990_2062013_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|120aa|down_5|NC_014315.1_2062133_2062493_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|66aa|down_6|NC_014315.1_2062505_2062703_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|172aa|down_7|NC_014315.1_2062765_2063281_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|645aa|down_8|NC_014315.1_2063284_2065219_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|395aa|down_9|NC_014315.1_2067603_2068788_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional
GCF_000143085.1_ASM14308v1	NC_014315	Nitrosococcus watsonii C-113, complete sequence	3	3072312-3072820	3,1,1	CRISPRCasFinder,PILER-CR,CRT	no	cas1,cas8f,cas5f,cas7f,cas6f,c2c9_V-U4	DEDDh,c2c10_CAS-V-U3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD,cas14j,c2c9_V-U4,cas8f,cas5f,cas7f,cas6f	Type I-F	GGTTCACCGCCGCACAGGCGGTTTAGAAA,GTTCACCGCCGCACAGGCGG,GTTCACNGCCGCACAGGCNGNTTAGAAA	29,20,28	0	0	NA	NA	I-F:NA:I-F	8,8,8	8	TypeI-F	DEDDh,c2c10_CAS-V-U3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3HD,cas14j,c2c9_V-U4,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|84aa|up_9|NC_014315.1_3060798_3061050_+	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM	NA|85aa|up_8|NC_014315.1_3061046_3061301_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|230aa|up_7|NC_014315.1_3061605_3062295_-	pfam06961, DUF1294, Protein of unknown function (DUF1294)	NA|71aa|up_6|NC_014315.1_3062291_3062504_-	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|286aa|up_5|NC_014315.1_3062624_3063482_+	PLN02839, PLN02839, nudix hydrolase	cas1|296aa|up_4|NC_014315.1_3067009_3067897_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas8f|450aa|up_3|NC_014315.1_3068198_3069548_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|310aa|up_2|NC_014315.1_3069544_3070474_+	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas7f|355aa|up_1|NC_014315.1_3070496_3071561_+	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3	cas6f|202aa|up_0|NC_014315.1_3071575_3072181_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|132aa|down_0|NC_014315.1_3073966_3074362_+	pfam01797, Y1_Tnp, Transposase IS200 like	c2c9_V-U4|374aa|down_1|NC_014315.1_3074362_3075484_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|140aa|down_2|NC_014315.1_3075586_3076006_-	pfam03653, UPF0093, Uncharacterized protein family (UPF0093)	c2c9_V-U4|227aa|down_3|NC_014315.1_3076353_3077034_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|998aa|down_4|NC_014315.1_3077154_3080148_+	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|457aa|down_5|NC_014315.1_3080201_3081572_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|357aa|down_6|NC_014315.1_3081577_3082648_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|474aa|down_7|NC_014315.1_3082677_3084099_-	TIGR00665, DnaB, replicative DNA helicase	NA|152aa|down_8|NC_014315.1_3084179_3084635_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|75aa|down_9|NC_014315.1_3084715_3084940_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed
