The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014217	Starkeya novella DSM 506, complete sequence	4765023	4583	47677	4765023	head,portal,protease,capsid,tRNA,tail,terminase	Sinorhizobium_phage(23.53%)	52	NA	NA
WP_041781866.1|4583_5234_+	hypothetical protein	NA	A0A291AUT5	Sinorhizobium_phage	75.1	8.1e-94
WP_013164850.1|5230_6295_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013164851.1|6306_6900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164852.1|6983_7343_+	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	56.8	1.1e-28
WP_013164853.1|7442_7940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164854.1|7939_9658_+|terminase	terminase large subunit	terminase	I3ULZ6	Rhodobacter_phage	41.6	1.5e-115
WP_013164855.1|9662_10994_+|portal	phage portal protein	portal	A0A141GEV9	Brucella_phage	51.6	1.2e-102
WP_144296044.1|11007_11865_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A141GEW1	Brucella_phage	50.8	1.2e-68
WP_144296045.1|12036_13257_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	58.0	2.3e-129
WP_013164858.1|13323_13587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164859.1|13590_13908_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_013164860.1|13910_14261_+|head	phage head closure protein	head	A0A141GEW5	Brucella_phage	45.6	4.9e-13
WP_013164861.1|14260_14455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164862.1|14441_14912_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_013164863.1|14908_15331_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_013164864.1|15388_15835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164866.1|16397_18404_+	tape measure protein	NA	J9SH65	Pseudomonas_phage	38.5	8.8e-30
WP_013164867.1|18406_19057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164868.1|19053_19680_+	DUF2163 domain-containing protein	NA	A0A2D2W208	Sinorhizobium_phage	42.9	1.3e-32
WP_013164869.1|19696_20101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164870.1|20104_22708_+	hypothetical protein	NA	A0A2D2W226	Sinorhizobium_phage	34.2	4.1e-88
WP_041781868.1|22740_24039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164872.1|24048_25224_+	DUF2793 domain-containing protein	NA	A0A0S2SY45	Pseudomonas_phage	35.8	1.6e-10
WP_013164873.1|25242_26691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164874.1|26769_26967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013164875.1|27002_27236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164876.1|27222_27813_+	lysozyme	NA	L7TM06	Rhizobium_phage	46.9	2.6e-38
WP_013164877.1|27812_28172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144295920.1|28089_28425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164879.1|28414_28699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164880.1|28682_28892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164881.1|29185_30901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144295921.1|30968_32042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144295922.1|32030_32888_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_013164883.1|32884_33166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013164884.1|33272_33494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164885.1|33486_33882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164886.1|33873_34557_-	SOS response-associated peptidase	NA	A0A291AUP1	Sinorhizobium_phage	45.8	1.1e-51
WP_013164887.1|34563_34791_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041782566.1|35167_35503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013164889.1|35682_38481_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_013164890.1|38688_39270_-	PRC-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_013164891.1|39423_39855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013164892.1|40076_41405_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_013164893.1|41412_42216_-	response regulator	NA	NA	NA	NA	NA
WP_013164894.1|42421_42661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013164895.1|42657_43209_+	sigma-70 family RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	29.4	8.4e-07
WP_013164896.1|43314_43494_-	DUF1328 domain-containing protein	NA	A0A0N7CBR2	Salmonella_phage	61.2	6.6e-06
WP_013164897.1|43694_44594_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013164898.1|44857_46054_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_013164899.1|46165_46714_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.9	5.9e-21
WP_013164900.1|46759_47677_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	33.0	3.4e-05
>prophage 2
NC_014217	Starkeya novella DSM 506, complete sequence	4765023	584895	595233	4765023		Bacillus_phage(50.0%)	7	NA	NA
WP_013165396.1|584895_586287_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	39.0	3.0e-77
WP_144296051.1|586283_588131_-	glycosyltransferase	NA	M1HVI2	Paramecium_bursaria_Chlorella_virus	41.1	1.7e-80
WP_013165398.1|588223_589210_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	35.1	2.2e-42
WP_013165399.1|589206_590217_-	SDR family oxidoreductase	NA	A0A2K9KZK0	Tupanvirus	43.0	6.8e-71
WP_013165400.1|590641_591994_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_013165401.1|591990_592665_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	1.5e-26
WP_013165402.1|593109_595233_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.8	7.9e-13
>prophage 3
NC_014217	Starkeya novella DSM 506, complete sequence	4765023	724987	749163	4765023	head,portal,protease,capsid,tail,transposase	Paracoccus_phage(14.29%)	29	NA	NA
WP_013165532.1|724987_725959_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_013165533.1|726093_727074_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_144295936.1|727322_727934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013165534.1|728351_728885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041781954.1|728850_730173_+	DNA-packaging protein	NA	A0A0K1LMR9	Caulobacter_phage	42.9	2.0e-78
WP_013165536.1|730174_731317_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_013165537.1|731445_732615_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	42.3	3.4e-74
WP_013165538.1|732678_732867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013165539.1|732863_733031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041781955.1|733027_733597_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	50.7	9.2e-33
WP_013165541.1|733827_735096_+|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	38.0	8.0e-61
WP_013165542.1|735173_735380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013165543.1|735580_736300_-|protease	trypsin-like serine protease	protease	Q6JPG5	Neodiprion_lecontei_nucleopolyhedrovirus	28.6	4.4e-08
WP_013165544.1|736401_736968_+|head,tail	phage head-tail connector protein	head,tail	A0A0F7L420	uncultured_marine_virus	29.0	1.5e-06
WP_013165545.1|736964_737285_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_013165546.1|737358_737763_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_013165547.1|737988_738396_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_013165548.1|738573_738927_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_144296052.1|738965_739124_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_013165550.1|739139_739748_+|tail	phage tail tape measure protein	tail	A0A1B2AQ26	Escherichia_phage	52.0	4.0e-10
WP_013165551.1|739747_740389_+	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	49.5	5.4e-50
WP_013165552.1|740385_741249_+	DUF2163 domain-containing protein	NA	A0A0K1Y6Z2	Rhodobacter_phage	45.2	4.0e-48
WP_013165553.1|741248_741680_+	C40 family peptidase	NA	F4YXU4	Roseobacter_phage	44.9	1.5e-27
WP_013165554.1|741796_745699_+|tail	glycoside hydrolase/phage tail family protein	tail	A0A0K1LLC1	Rhodobacter_phage	40.4	2.0e-235
WP_013165555.1|745991_746681_+	DUF2793 domain-containing protein	NA	A0A1V0DY81	Dinoroseobacter_phage	44.3	2.5e-45
WP_013165556.1|746692_746998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013165557.1|746999_747875_+	hypothetical protein	NA	A0A2H4PAN7	Aphanizomenon_phage	46.2	1.7e-17
WP_144295937.1|747882_748350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013165559.1|748365_749163_+	glycoside hydrolase family 108 protein	NA	A0A1V0DY74	Dinoroseobacter_phage	44.7	7.5e-41
>prophage 4
NC_014217	Starkeya novella DSM 506, complete sequence	4765023	1733280	1746482	4765023	tRNA	uncultured_Mediterranean_phage(62.5%)	12	NA	NA
WP_013166484.1|1733280_1736184_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	64.2	0.0e+00
WP_013166485.1|1736283_1736439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013166486.1|1736738_1737296_+	single-stranded DNA-binding protein	NA	A0A0U2C0X4	Paracoccus_phage	73.9	2.3e-44
WP_041782109.1|1737386_1738013_-	MarC family protein	NA	NA	NA	NA	NA
WP_013166488.1|1738309_1741066_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	42.9	2.0e-77
WP_013166489.1|1741154_1741736_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	34.2	5.2e-15
WP_013166490.1|1741807_1742317_+	pantetheine-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_013166491.1|1742358_1742913_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	54.0	1.4e-38
WP_013166492.1|1742952_1743411_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	50.6	4.8e-32
WP_013166493.1|1743495_1744590_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_041783074.1|1744589_1745735_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	51.7	3.3e-98
WP_013166495.1|1745882_1746482_-	NAD(P)H:quinone oxidoreductase	NA	M1IAZ8	Acanthocystis_turfacea_Chlorella_virus	35.8	4.8e-16
>prophage 5
NC_014217	Starkeya novella DSM 506, complete sequence	4765023	1960212	1971770	4765023	tRNA	uncultured_Mediterranean_phage(81.82%)	13	NA	NA
WP_013166683.1|1960212_1960554_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	43.5	2.6e-14
WP_013166684.1|1960751_1961648_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_013166685.1|1961697_1962873_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	42.7	4.5e-18
WP_049785719.1|1962981_1963647_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	48.2	1.3e-30
WP_013166687.1|1963689_1964454_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	39.0	3.7e-37
WP_013166688.1|1964575_1966060_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.4	9.2e-93
WP_013166689.1|1966129_1966921_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	43.4	5.9e-46
WP_013166690.1|1966917_1967733_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_013166691.1|1967790_1968009_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	65.9	3.0e-08
WP_013166692.1|1968076_1969156_-	ABC transporter ATP-binding protein	NA	F2Y165	Organic_Lake_phycodnavirus	26.5	1.0e-08
WP_013166693.1|1969193_1969925_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.4	2.2e-39
WP_013166694.1|1969921_1970734_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	35.0	1.9e-31
WP_187291138.1|1970753_1971770_-	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	43.3	5.6e-25
>prophage 6
NC_014217	Starkeya novella DSM 506, complete sequence	4765023	2115711	2176032	4765023	head,portal,protease,tRNA,capsid,integrase,tail,terminase	Erysipelothrix_phage(21.43%)	58	2155210:2155228	2167307:2167325
WP_013166815.1|2115711_2117712_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.9	1.3e-121
WP_013166816.1|2117886_2120574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144296072.1|2120627_2120915_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
WP_013166819.1|2121622_2122069_-	iron-sulfur cluster assembly scaffold protein	NA	NA	NA	NA	NA
WP_013166820.1|2122324_2122963_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	48.4	2.6e-44
WP_013166821.1|2122979_2123465_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_013166822.1|2123743_2124175_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_013166823.1|2124349_2125123_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_041782156.1|2125387_2126041_+	transglutaminase-like cysteine peptidase	NA	NA	NA	NA	NA
WP_013166825.1|2126335_2126866_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_013166826.1|2126872_2127085_-	DUF3126 family protein	NA	NA	NA	NA	NA
WP_013166827.1|2127170_2128022_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_013166828.1|2128233_2128986_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_013166829.1|2129072_2129432_-	DUF4087 domain-containing protein	NA	NA	NA	NA	NA
WP_013166830.1|2129444_2130431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013166831.1|2130771_2131020_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_013166832.1|2131035_2132214_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_041783171.1|2132402_2133272_+	DMT family transporter	NA	NA	NA	NA	NA
WP_013166834.1|2133396_2134425_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013166835.1|2134720_2138551_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_013166836.1|2138683_2139217_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013166837.1|2139247_2140150_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013166838.1|2140270_2140993_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_013166839.1|2141003_2141357_+	Atu4866 domain-containing protein	NA	NA	NA	NA	NA
WP_081441027.1|2141368_2142715_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_144295977.1|2142869_2143730_+	EamA family transporter	NA	NA	NA	NA	NA
WP_013166842.1|2143822_2144281_+	DUF4126 family protein	NA	NA	NA	NA	NA
WP_013166843.1|2144280_2145669_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	31.9	1.5e-57
WP_013166844.1|2145689_2147423_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_013166845.1|2147415_2148492_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.9	1.3e-27
WP_013166846.1|2148532_2149636_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013166847.1|2149946_2151974_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_013166848.1|2152100_2153369_-	FAD-binding protein	NA	NA	NA	NA	NA
WP_013166849.1|2153388_2154498_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013166850.1|2154678_2155953_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
2155210:2155228	attL	GCCGGCATCGGTCTCGACG	NA	NA	NA	NA
WP_013166851.1|2155956_2157540_-	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0SI18	Klosneuvirus	32.5	3.3e-56
WP_013166852.1|2157830_2159006_+	MFS transporter	NA	NA	NA	NA	NA
WP_041782161.1|2159018_2160506_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_041783175.1|2160838_2161345_+	flavin reductase	NA	Q9KX93	Enterobacteria_phage	34.1	9.4e-05
WP_013166855.1|2161398_2162133_-	glucose 1-dehydrogenase	NA	NA	NA	NA	NA
WP_013166856.1|2162220_2162619_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013166857.1|2162634_2163027_-	RidA family protein	NA	NA	NA	NA	NA
WP_013166858.1|2163082_2163229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013166859.1|2163563_2165255_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_187291109.1|2165518_2166649_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	35.0	9.3e-53
WP_013166861.1|2166641_2167016_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_013166862.1|2167112_2167619_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0R6PIR7	Moraxella_phage	40.3	7.9e-20
2167307:2167325	attR	CGTCGAGACCGATGCCGGC	NA	NA	NA	NA
WP_013166863.1|2167629_2168769_+|capsid	phage major capsid protein	capsid	A0A2I4R671	Erysipelothrix_phage	33.9	3.6e-36
WP_013166864.1|2168772_2169348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041783183.1|2169347_2169695_+	HNH endonuclease	NA	Q38456	Bacillus_phage	44.7	3.4e-14
WP_041782163.1|2169697_2170495_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_187291110.1|2170672_2170927_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_013166868.1|2170928_2171333_+	HK97 gp10 family phage protein	NA	B4UTQ0	Rhizobium_phage	38.2	1.4e-11
WP_013166869.1|2171332_2171740_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_013166870.1|2171736_2172054_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_013166871.1|2172050_2172464_+|terminase	phage terminase small subunit P27 family	terminase	A0A1B3AYP2	Gordonia_phage	37.7	1.0e-09
WP_013166872.1|2172463_2174083_+|terminase	terminase	terminase	A0A0U2C138	Paracoccus_phage	29.1	2.9e-39
WP_013166873.1|2174082_2176032_+|tail	tail tape measure protein TP901 core region	tail	A0A291AUM6	Sinorhizobium_phage	36.2	1.3e-41
