assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000092885.1_ASM9288v1	NC_014117	Paraburkholderia sp. CCGE1002 chromosome 1, complete sequence	1	2445574-2445674	1	CRISPRCasFinder	no	csa3,DEDDh	cas3,WYL,csa3,DinG,DEDDh	Type I-A	CAGCAGGCGCAGCAGCCGCATTTCGA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DinG,DEDDh	NA|88aa|up_8|NC_014117.1_2433728_2433992_-,NA|47aa|up_1|NC_014117.1_2442134_2442275_-,NA|159aa|down_2|NC_014117.1_2449122_2449599_+,NA|184aa|down_3|NC_014117.1_2449717_2450269_+,NA|226aa|down_4|NC_014117.1_2450265_2450943_+,NA|464aa|down_5|NC_014117.1_2450968_2452360_+,NA|270aa|down_7|NC_014117.1_2453186_2453996_+	NA|732aa|up_9|NC_014117.1_2431474_2433670_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|88aa|up_8|NC_014117.1_2433728_2433992_-	NA	NA|73aa|up_7|NC_014117.1_2434945_2435164_+	pfam13275, S4_2, S4 domain	NA|472aa|up_6|NC_014117.1_2435461_2436877_+	cd13131, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Vibrio cholerae NorM	NA|320aa|up_5|NC_014117.1_2437222_2438182_+	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|534aa|up_4|NC_014117.1_2438429_2440031_+	cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins	NA|466aa|up_3|NC_014117.1_2440046_2441444_+	PRK00485, fumC, fumarate hydratase; Reviewed	NA|169aa|up_2|NC_014117.1_2441508_2442015_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|47aa|up_1|NC_014117.1_2442134_2442275_-	NA	csa3|238aa|up_0|NC_014117.1_2442461_2443175_+	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|324aa|down_0|NC_014117.1_2445972_2446944_-	PRK13821, thyA, thymidylate synthase; Provisional	NA|465aa|down_1|NC_014117.1_2447189_2448584_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|159aa|down_2|NC_014117.1_2449122_2449599_+	NA	NA|184aa|down_3|NC_014117.1_2449717_2450269_+	NA	NA|226aa|down_4|NC_014117.1_2450265_2450943_+	NA	NA|464aa|down_5|NC_014117.1_2450968_2452360_+	NA	NA|238aa|down_6|NC_014117.1_2452465_2453179_+	cd02423, Peptidase_C39G, A sub-family of peptidase family C39	NA|270aa|down_7|NC_014117.1_2453186_2453996_+	NA	NA|473aa|down_8|NC_014117.1_2454123_2455542_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|520aa|down_9|NC_014117.1_2455566_2457126_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
GCF_000092885.1_ASM9288v1	NC_014118	Paraburkholderia sp. CCGE1002 chromosome 2, complete sequence	1	2048965-2049137	1	CRISPRCasFinder	no		csa3,DinG,cas3	Orphan	GACCTCCTGAAAAGCCTCACCTTTGC	26	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csa3,DinG,DEDDh	NA|72aa|up_8|NC_014118.1_2040801_2041017_+,NA|172aa|down_9|NC_014118.1_2058589_2059105_+	NA|186aa|up_9|NC_014118.1_2039954_2040512_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|72aa|up_8|NC_014118.1_2040801_2041017_+	NA	NA|203aa|up_7|NC_014118.1_2041687_2042296_+	PRK12545, PRK12545, RNA polymerase factor sigma-70	NA|71aa|up_6|NC_014118.1_2042276_2042489_+	pfam13490, zf-HC2, Putative zinc-finger	NA|97aa|up_5|NC_014118.1_2042513_2042804_-	pfam06906, DUF1272, Protein of unknown function (DUF1272)	NA|328aa|up_4|NC_014118.1_2043093_2044077_+	cd13557, PBP2_SsuA, Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|120aa|up_3|NC_014118.1_2044131_2044491_-	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|221aa|up_2|NC_014118.1_2045218_2045881_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|352aa|up_1|NC_014118.1_2045905_2046961_+	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|450aa|up_0|NC_014118.1_2047020_2048370_-	pfam01051, Rep_3, Initiator Replication protein	NA|410aa|down_0|NC_014118.1_2050348_2051578_+	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|361aa|down_1|NC_014118.1_2051648_2052731_-	pfam00589, Phage_integrase, Phage integrase family	NA|133aa|down_2|NC_014118.1_2052848_2053247_-	pfam10616, DUF2471, Protein of unknown function (DUF2471)	NA|216aa|down_3|NC_014118.1_2053314_2053962_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|402aa|down_4|NC_014118.1_2054099_2055305_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|344aa|down_5|NC_014118.1_2055333_2056365_+	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|217aa|down_6|NC_014118.1_2056406_2057057_-	pfam04264, YceI, YceI-like domain	NA|224aa|down_7|NC_014118.1_2057179_2057851_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|160aa|down_8|NC_014118.1_2057860_2058340_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|172aa|down_9|NC_014118.1_2058589_2059105_+	NA
GCF_000092885.1_ASM9288v1	NC_014118	Paraburkholderia sp. CCGE1002 chromosome 2, complete sequence	2	2049369-2049438	2	CRISPRCasFinder	no		csa3,DinG,cas3	Orphan	GACCTCCTGAAAAGCCTCACCTTTGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DinG,DEDDh	NA|72aa|up_8|NC_014118.1_2040801_2041017_+,NA|172aa|down_9|NC_014118.1_2058589_2059105_+	NA|186aa|up_9|NC_014118.1_2039954_2040512_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|72aa|up_8|NC_014118.1_2040801_2041017_+	NA	NA|203aa|up_7|NC_014118.1_2041687_2042296_+	PRK12545, PRK12545, RNA polymerase factor sigma-70	NA|71aa|up_6|NC_014118.1_2042276_2042489_+	pfam13490, zf-HC2, Putative zinc-finger	NA|97aa|up_5|NC_014118.1_2042513_2042804_-	pfam06906, DUF1272, Protein of unknown function (DUF1272)	NA|328aa|up_4|NC_014118.1_2043093_2044077_+	cd13557, PBP2_SsuA, Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|120aa|up_3|NC_014118.1_2044131_2044491_-	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|221aa|up_2|NC_014118.1_2045218_2045881_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|352aa|up_1|NC_014118.1_2045905_2046961_+	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|450aa|up_0|NC_014118.1_2047020_2048370_-	pfam01051, Rep_3, Initiator Replication protein	NA|410aa|down_0|NC_014118.1_2050348_2051578_+	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|361aa|down_1|NC_014118.1_2051648_2052731_-	pfam00589, Phage_integrase, Phage integrase family	NA|133aa|down_2|NC_014118.1_2052848_2053247_-	pfam10616, DUF2471, Protein of unknown function (DUF2471)	NA|216aa|down_3|NC_014118.1_2053314_2053962_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|402aa|down_4|NC_014118.1_2054099_2055305_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|344aa|down_5|NC_014118.1_2055333_2056365_+	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|217aa|down_6|NC_014118.1_2056406_2057057_-	pfam04264, YceI, YceI-like domain	NA|224aa|down_7|NC_014118.1_2057179_2057851_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|160aa|down_8|NC_014118.1_2057860_2058340_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|172aa|down_9|NC_014118.1_2058589_2059105_+	NA
