assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000092865.1_ASM9286v1	NC_014151	Cellulomonas flavigena DSM 20109, complete sequence	1	493329-493402	1	CRISPRCasFinder	no	csa3	WYL,csa3,cas3,DEDDh,DinG,cas4	Type I-A	GGGCTGGATCGACGTCTCGCGCCC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas4	NA|151aa|up_8|NC_014151.1_482690_483143_-,NA|208aa|up_0|NC_014151.1_492663_493287_+,NA|53aa|down_1|NC_014151.1_494617_494776_+,NA|51aa|down_2|NC_014151.1_494772_494925_+	NA|123aa|up_9|NC_014151.1_482283_482652_-	pfam07883, Cupin_2, Cupin domain	NA|151aa|up_8|NC_014151.1_482690_483143_-	NA	NA|299aa|up_7|NC_014151.1_483290_484187_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|619aa|up_6|NC_014151.1_484267_486124_-	cd18618, GH43_Xsa43E-like, Glycosyl hydrolase family 43, including Butyrivibrio proteoclasticus arabinofuranosidase Xsa43E	NA|560aa|up_5|NC_014151.1_486120_487800_-	cd14792, GH27, glycosyl hydrolase family 27 (GH27)	NA|711aa|up_4|NC_014151.1_488125_490258_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|199aa|up_3|NC_014151.1_490449_491046_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|390aa|up_2|NC_014151.1_491054_492224_-	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|134aa|up_1|NC_014151.1_492265_492667_+	pfam13921, Myb_DNA-bind_6, Myb-like DNA-binding domain	NA|208aa|up_0|NC_014151.1_492663_493287_+	NA	NA|343aa|down_0|NC_014151.1_493492_494521_-	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|53aa|down_1|NC_014151.1_494617_494776_+	NA	NA|51aa|down_2|NC_014151.1_494772_494925_+	NA	NA|338aa|down_3|NC_014151.1_495169_496183_+	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|62aa|down_4|NC_014151.1_496227_496413_+	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type	NA|190aa|down_5|NC_014151.1_496483_497053_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|654aa|down_6|NC_014151.1_497324_499286_+	pfam13229, Beta_helix, Right handed beta helix region	NA|207aa|down_7|NC_014151.1_499352_499973_-	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	csa3|135aa|down_8|NC_014151.1_499969_500374_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|543aa|down_9|NC_014151.1_500615_502244_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
GCF_000092865.1_ASM9286v1	NC_014151	Cellulomonas flavigena DSM 20109, complete sequence	2	561622-561826	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas4	Orphan	GACCTGCGCGACGCCGACCTGCGCG	25	2	7	561647-561666|561647-561666|561647-561666|561647-561666|561782-561801|561782-561801|561782-561801	NC_014151.1_791879-791898|NC_014151.1_2570301-2570320|NC_014151.1_2931624-2931605|NC_014151.1_3005743-3005762|NC_014151.1_561812-561831|NC_014151.1_561842-561861|NC_014151.1_3615052-3615071	NA	4	4	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas4	NA|102aa|up_7|NC_014151.1_548895_549201_+,NA|1102aa|up_4|NC_014151.1_552652_555958_-,NA|196aa|up_0|NC_014151.1_560441_561029_-,NA|123aa|down_1|NC_014151.1_562895_563264_+	NA|473aa|up_9|NC_014151.1_547037_548456_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|143aa|up_8|NC_014151.1_548465_548894_+	cd04684, Nudix_Hydrolase_25, Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function	NA|102aa|up_7|NC_014151.1_548895_549201_+	NA	NA|374aa|up_6|NC_014151.1_549898_551020_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|423aa|up_5|NC_014151.1_551187_552456_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|1102aa|up_4|NC_014151.1_552652_555958_-	NA	NA|442aa|up_3|NC_014151.1_555954_557280_-	pfam04434, SWIM, SWIM zinc finger	NA|134aa|up_2|NC_014151.1_557349_557751_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|842aa|up_1|NC_014151.1_557885_560411_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|196aa|up_0|NC_014151.1_560441_561029_-	NA	NA|231aa|down_0|NC_014151.1_562055_562748_-	pfam13305, WHG, WHG domain	NA|123aa|down_1|NC_014151.1_562895_563264_+	NA	NA|304aa|down_2|NC_014151.1_563573_564485_+	cd16943, HATPase_AtoS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS	NA|167aa|down_3|NC_014151.1_565097_565598_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|335aa|down_4|NC_014151.1_565601_566606_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|318aa|down_5|NC_014151.1_566701_567655_-	PRK01966, ddl, D-alanine--D-alanine ligase	NA|395aa|down_6|NC_014151.1_567699_568884_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|208aa|down_7|NC_014151.1_568880_569504_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|379aa|down_8|NC_014151.1_569734_570871_+	cd08183, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like	NA|151aa|down_9|NC_014151.1_570923_571376_+	pfam09424, YqeY, Yqey-like protein
GCF_000092865.1_ASM9286v1	NC_014151	Cellulomonas flavigena DSM 20109, complete sequence	3	807036-807148	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas4	Orphan	CGGAAGGTGACCCGGGTTCCGGTCGGCGG	29	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas4	NA|511aa|up_6|NC_014151.1_798851_800384_-,NA|303aa|up_0|NC_014151.1_805992_806901_-,NA|550aa|down_2|NC_014151.1_810579_812229_-,NA|102aa|down_7|NC_014151.1_817716_818022_-	NA|333aa|up_9|NC_014151.1_794590_795589_-	COG5017, COG5017, Uncharacterized conserved protein [Function unknown]	NA|430aa|up_8|NC_014151.1_795787_797077_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|580aa|up_7|NC_014151.1_797115_798855_-	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein	NA|511aa|up_6|NC_014151.1_798851_800384_-	NA	NA|400aa|up_5|NC_014151.1_800380_801580_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|366aa|up_4|NC_014151.1_801678_802776_-	pfam04230, PS_pyruv_trans, Polysaccharide pyruvyl transferase	NA|320aa|up_3|NC_014151.1_802814_803774_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|310aa|up_2|NC_014151.1_803778_804708_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|432aa|up_1|NC_014151.1_804704_806000_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|303aa|up_0|NC_014151.1_805992_806901_-	NA	NA|422aa|down_0|NC_014151.1_808621_809887_-	cd03822, GT4_mannosyltransferase-like, mannosyltransferases of glycosyltransferase family 4 and similar proteins	NA|113aa|down_1|NC_014151.1_810184_810523_-	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|550aa|down_2|NC_014151.1_810579_812229_-	NA	NA|128aa|down_3|NC_014151.1_812440_812824_+	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea	NA|311aa|down_4|NC_014151.1_812825_813758_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|1027aa|down_5|NC_014151.1_813754_816835_+	PRK14083, PRK14083, HSP90 family protein; Provisional	NA|260aa|down_6|NC_014151.1_816892_817672_+	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|102aa|down_7|NC_014151.1_817716_818022_-	NA	NA|196aa|down_8|NC_014151.1_818068_818656_-	cd16344, LMWPAP, low molecular weight protein arginine phosphatase	NA|582aa|down_9|NC_014151.1_819104_820850_+	pfam13196, DUF4012, Protein of unknown function (DUF4012)
GCF_000092865.1_ASM9286v1	NC_014151	Cellulomonas flavigena DSM 20109, complete sequence	4	1021146-1021250	4	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas4	Orphan	GTGTCGATCGTGTCCGCCTCGGCGG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas4	NA|280aa|up_8|NC_014151.1_1012690_1013530_+,NA|147aa|up_0|NC_014151.1_1020488_1020929_-,NA|76aa|down_0|NC_014151.1_1022868_1023096_+	NA|91aa|up_9|NC_014151.1_1012414_1012687_-	PRK14559, PRK14559, serine/threonine phosphatase	NA|280aa|up_8|NC_014151.1_1012690_1013530_+	NA	NA|469aa|up_7|NC_014151.1_1013549_1014956_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|334aa|up_6|NC_014151.1_1015039_1016041_+	pfam05448, AXE1, Acetyl xylan esterase (AXE1)	NA|195aa|up_5|NC_014151.1_1016048_1016633_-	pfam13305, WHG, WHG domain	NA|286aa|up_4|NC_014151.1_1016629_1017487_-	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|135aa|up_3|NC_014151.1_1017623_1018028_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|424aa|up_2|NC_014151.1_1018165_1019437_-	TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase	NA|261aa|up_1|NC_014151.1_1019463_1020246_-	pfam02517, Abi, CAAX protease self-immunity	NA|147aa|up_0|NC_014151.1_1020488_1020929_-	NA	NA|76aa|down_0|NC_014151.1_1022868_1023096_+	NA	NA|138aa|down_1|NC_014151.1_1023086_1023500_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|210aa|down_2|NC_014151.1_1023823_1024453_-	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|412aa|down_3|NC_014151.1_1024618_1025854_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|412aa|down_4|NC_014151.1_1025877_1027113_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|400aa|down_5|NC_014151.1_1027109_1028309_+	PRK08198, PRK08198, threonine dehydratase; Provisional	NA|162aa|down_6|NC_014151.1_1028403_1028889_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|152aa|down_7|NC_014151.1_1029076_1029532_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|288aa|down_8|NC_014151.1_1029594_1030458_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|125aa|down_9|NC_014151.1_1030454_1030829_+	PRK06007, fliF, flagellar basal body M-ring protein FliF
GCF_000092865.1_ASM9286v1	NC_014151	Cellulomonas flavigena DSM 20109, complete sequence	5	1068442-1068540	5	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas4	Orphan	CACCCGCCGACCGGAACCTGACTCAC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas4	NA,NA|423aa|down_6|NC_014151.1_1073939_1075208_+,NA|177aa|down_8|NC_014151.1_1076731_1077262_-,NA|177aa|down_9|NC_014151.1_1077410_1077941_-	NA|1091aa|up_9|NC_014151.1_1051026_1054299_-	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|241aa|up_8|NC_014151.1_1054338_1055061_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|347aa|up_7|NC_014151.1_1055057_1056098_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|935aa|up_6|NC_014151.1_1056115_1058920_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1120aa|up_5|NC_014151.1_1058916_1062276_-	pfam02687, FtsX, FtsX-like permease family	NA|471aa|up_4|NC_014151.1_1062472_1063885_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|399aa|up_3|NC_014151.1_1064122_1065319_+	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold	NA|321aa|up_2|NC_014151.1_1065315_1066278_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|278aa|up_1|NC_014151.1_1066274_1067108_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|432aa|up_0|NC_014151.1_1067134_1068430_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|106aa|down_0|NC_014151.1_1068603_1068921_+	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)	NA|202aa|down_1|NC_014151.1_1069008_1069614_-	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|339aa|down_2|NC_014151.1_1069697_1070714_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|91aa|down_3|NC_014151.1_1070734_1071007_-	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|422aa|down_4|NC_014151.1_1071405_1072671_-	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|342aa|down_5|NC_014151.1_1072844_1073870_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|423aa|down_6|NC_014151.1_1073939_1075208_+	NA	NA|480aa|down_7|NC_014151.1_1075229_1076669_-	pfam02646, RmuC, RmuC family	NA|177aa|down_8|NC_014151.1_1076731_1077262_-	NA	NA|177aa|down_9|NC_014151.1_1077410_1077941_-	NA
GCF_000092865.1_ASM9286v1	NC_014151	Cellulomonas flavigena DSM 20109, complete sequence	6	1597329-1597431	6	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas4	Orphan	CGCCCGCGAGACGTCGATCCAGCCCCG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas4	NA,NA|310aa|down_6|NC_014151.1_1605185_1606115_+,NA|583aa|down_7|NC_014151.1_1606111_1607860_+,NA|214aa|down_8|NC_014151.1_1607856_1608498_+	NA|214aa|up_9|NC_014151.1_1585503_1586145_-	pfam00553, CBM_2, Cellulose binding domain	NA|447aa|up_8|NC_014151.1_1587100_1588441_-	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional	NA|283aa|up_7|NC_014151.1_1588649_1589498_+	cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases)	NA|473aa|up_6|NC_014151.1_1589524_1590943_+	PRK08323, PRK08323, phenylhydantoinase; Validated	NA|364aa|up_5|NC_014151.1_1590956_1592048_+	TIGR03842, F420_CPS_4043, F420-dependent oxidoreductase, CPS_4043 family	NA|322aa|up_4|NC_014151.1_1592044_1593010_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|292aa|up_3|NC_014151.1_1593006_1593882_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|261aa|up_2|NC_014151.1_1593878_1594661_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|379aa|up_1|NC_014151.1_1594760_1595897_+	pfam09084, NMT1, NMT1/THI5 like	NA|445aa|up_0|NC_014151.1_1595982_1597317_+	PRK06062, PRK06062, hypothetical protein; Provisional	NA|254aa|down_0|NC_014151.1_1597478_1598240_+	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|601aa|down_1|NC_014151.1_1598331_1600134_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|607aa|down_2|NC_014151.1_1600130_1601951_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|202aa|down_3|NC_014151.1_1601969_1602575_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|351aa|down_4|NC_014151.1_1602571_1603624_+	TIGR01526, nadR_NMN_Atrans, nicotinamide-nucleotide adenylyltransferase, NadR type	NA|471aa|down_5|NC_014151.1_1603788_1605201_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|310aa|down_6|NC_014151.1_1605185_1606115_+	NA	NA|583aa|down_7|NC_014151.1_1606111_1607860_+	NA	NA|214aa|down_8|NC_014151.1_1607856_1608498_+	NA	NA|500aa|down_9|NC_014151.1_1608484_1609984_+	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism]
