assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	1	112115-112451	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	GTTGCAAAAGGGTCTGCCCCGTCAGGGGATTGAAAC,GTTGCAAAAGGGTCTGCCCCGTCAGGGGATTGAAAC,GTTGCAAAAGGGTCTGCCCCGTCAGGGGATTGAAAC	36,36,36	0	0	NA	NA	III-A:III-A:III-A	4,4,4	4	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA,NA	NA|381aa|up_9|NC_014221.1_101993_103136_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|219aa|up_8|NC_014221.1_103137_103794_+	PRK06696, PRK06696, uridine kinase; Validated	NA|337aa|up_7|NC_014221.1_103896_104907_+	pfam01916, DS, Deoxyhypusine synthase	NA|91aa|up_6|NC_014221.1_104928_105201_-	TIGR04354, conserved_hypothetical_protein, amphi-Trp domain	NA|199aa|up_5|NC_014221.1_106239_106836_-	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region	NA|404aa|up_4|NC_014221.1_106936_108148_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|176aa|up_3|NC_014221.1_108294_108822_+	COG3918, COG3918, Predicted membrane protein [Function unknown]	NA|400aa|up_2|NC_014221.1_108990_110190_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|100aa|up_1|NC_014221.1_110173_110473_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|464aa|up_0|NC_014221.1_110474_111866_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|615aa|down_0|NC_014221.1_112855_114700_+	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins	NA|175aa|down_1|NC_014221.1_114726_115251_+	pfam04982, HPP, HPP family	NA|169aa|down_2|NC_014221.1_115272_115779_-	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily	NA|633aa|down_3|NC_014221.1_115881_117780_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|338aa|down_4|NC_014221.1_118410_119424_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|211aa|down_5|NC_014221.1_119734_120367_+	pfam02397, Bac_transf, Bacterial sugar transferase	NA|362aa|down_6|NC_014221.1_120363_121449_+	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional	NA|353aa|down_7|NC_014221.1_121467_122526_+	pfam14397, ATPgrasp_ST, Sugar-transfer associated ATP-grasp	NA|400aa|down_8|NC_014221.1_122522_123722_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|325aa|down_9|NC_014221.1_124196_125171_-	cd01049, RNRR2, Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	2	347049-348383	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	GTTGCAGCCGCCCTTCGGGGCGGCTGAGGATTGAAAC,GTTGCAGCCGCCCTTCGGGGCGGCTGAGGATTGAAAC,GTTGCAGCCGCCCTTCGGGGCGGCTGAGGATTGAAAC	37,37,37	0	0	NA	NA	I-C:I-C:I-C	18,18,18	18	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|135aa|up_4|NC_014221.1_341612_342017_-,NA	NA|160aa|up_9|NC_014221.1_337991_338471_+	TIGR03082, Gneg_AbrB_dup, membrane protein AbrB duplication	NA|67aa|up_8|NC_014221.1_338504_338705_+	pfam04024, PspC, PspC domain	NA|356aa|up_7|NC_014221.1_338751_339819_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|247aa|up_6|NC_014221.1_340056_340797_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|252aa|up_5|NC_014221.1_340860_341616_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|135aa|up_4|NC_014221.1_341612_342017_-	NA	NA|289aa|up_3|NC_014221.1_342013_342880_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|373aa|up_2|NC_014221.1_342876_343995_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|412aa|up_1|NC_014221.1_344101_345337_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|417aa|up_0|NC_014221.1_345459_346710_-	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|794aa|down_0|NC_014221.1_348625_351007_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|155aa|down_1|NC_014221.1_351112_351577_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|525aa|down_2|NC_014221.1_351730_353305_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|379aa|down_3|NC_014221.1_353304_354441_+	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|140aa|down_4|NC_014221.1_354454_354874_+	pfam05168, HEPN, HEPN domain	NA|87aa|down_5|NC_014221.1_354899_355160_+	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|150aa|down_6|NC_014221.1_355176_355626_+	pfam11026, DUF2721, Protein of unknown function (DUF2721)	NA|418aa|down_7|NC_014221.1_357058_358312_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|257aa|down_8|NC_014221.1_358308_359079_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|547aa|down_9|NC_014221.1_359084_360725_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	3	383906-384003	3	CRISPRCasFinder	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	TCACGGCCACTAGGCCGGCGGCTGGAGCCGCTAAC	35	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|119aa|up_0|NC_014221.1_383058_383415_+,NA|52aa|down_0|NC_014221.1_384364_384520_+	NA|207aa|up_9|NC_014221.1_374459_375080_+	PRK00300, gmk, guanylate kinase; Provisional	NA|103aa|up_8|NC_014221.1_375211_375520_+	COG1758, RpoZ, DNA-directed RNA polymerase, subunit K/omega [Transcription]	NA|396aa|up_7|NC_014221.1_375586_376774_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|153aa|up_6|NC_014221.1_376836_377295_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|780aa|up_5|NC_014221.1_377336_379676_+	sd00006, TPR, Tetratricopeptide repeat	NA|372aa|up_4|NC_014221.1_379672_380788_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|173aa|up_3|NC_014221.1_380958_381477_-	cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction	NA|220aa|up_2|NC_014221.1_381478_382138_-	cd07756, CYTH-like_Pase_CHAD, Uncharacterized subgroup of the CYTH-like superfamily having an associated CHAD domain	NA|205aa|up_1|NC_014221.1_382322_382937_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|119aa|up_0|NC_014221.1_383058_383415_+	NA	NA|52aa|down_0|NC_014221.1_384364_384520_+	NA	NA|80aa|down_1|NC_014221.1_384503_384743_+	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|285aa|down_2|NC_014221.1_384765_385620_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|401aa|down_3|NC_014221.1_385779_386982_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|175aa|down_4|NC_014221.1_387153_387678_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|201aa|down_5|NC_014221.1_387811_388414_+	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|292aa|down_6|NC_014221.1_388495_389371_-	pfam00892, EamA, EamA-like transporter family	NA|119aa|down_7|NC_014221.1_389569_389926_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|477aa|down_8|NC_014221.1_390379_391810_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|286aa|down_9|NC_014221.1_391852_392710_-	pfam01972, SDH_sah, Serine dehydrogenase proteinase
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	4	470705-471348	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,csx1,cas6	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Unclear	GTTGCAAAAGGGTCTGCCCCGTCAGGGGATTGAAAC,GTTTCAATCCCCTGACGGGGCAGACCCTTTTGCAAC,GTTTCAATCCCCTGACGGGGCAGACCCTTTTGCAAC	36,36,36	0	0	NA	NA	III-A:III-A:III-A	8,8,8	8	Unclear	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|55aa|up_4|NC_014221.1_468386_468551_-,NA	NA|253aa|up_9|NC_014221.1_464045_464804_-	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|244aa|up_8|NC_014221.1_464819_465551_-	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones]	NA|231aa|up_7|NC_014221.1_465543_466236_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|236aa|up_6|NC_014221.1_466232_466940_-	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|131aa|up_5|NC_014221.1_467832_468225_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|55aa|up_4|NC_014221.1_468386_468551_-	NA	NA|103aa|up_3|NC_014221.1_468683_468992_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|118aa|up_2|NC_014221.1_468992_469346_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|65aa|up_1|NC_014221.1_470027_470222_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|81aa|up_0|NC_014221.1_470250_470493_-	pfam08972, DUF1902, Domain of unknown function (DUF1902)	cas2|90aa|down_0|NC_014221.1_471666_471936_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_1|NC_014221.1_471956_472949_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	csx1|485aa|down_2|NC_014221.1_472953_474408_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|402aa|down_3|NC_014221.1_474401_475607_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	cas6|248aa|down_4|NC_014221.1_477308_478052_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|320aa|down_5|NC_014221.1_478074_479034_-	cd09626, DOMON_glucodextranase_like, DOMON-like domain of various glycoside hydrolases	NA|441aa|down_6|NC_014221.1_479035_480358_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|308aa|down_7|NC_014221.1_480350_481274_-	PRK05416, PRK05416, RNase adapter RapZ	NA|221aa|down_8|NC_014221.1_481323_481986_-	pfam05036, SPOR, Sporulation related domain	NA|218aa|down_9|NC_014221.1_482037_482691_-	cd01748, GATase1_IGP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS)
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	5	476285-477079	4,5,4	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,csx1,cas6	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Unclear	GTTGCAAAAGGGTCTGCCCCGTCAGGGGATTGAAAC,GTTTCAATCCCCTGACGGGGCAGACCCTTTTGCAAC,GTTTCAATCCCCTGACGGGGCAGACCCTTTTGCAAC	36,36,36	0	0	NA	NA	III-A:III-A:III-A	10,10,10	10	Unclear	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|55aa|up_8|NC_014221.1_468386_468551_-,NA	NA|131aa|up_9|NC_014221.1_467832_468225_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|55aa|up_8|NC_014221.1_468386_468551_-	NA	NA|103aa|up_7|NC_014221.1_468683_468992_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|118aa|up_6|NC_014221.1_468992_469346_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|65aa|up_5|NC_014221.1_470027_470222_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|81aa|up_4|NC_014221.1_470250_470493_-	pfam08972, DUF1902, Domain of unknown function (DUF1902)	cas2|90aa|up_3|NC_014221.1_471666_471936_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|up_2|NC_014221.1_471956_472949_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	csx1|485aa|up_1|NC_014221.1_472953_474408_-	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|402aa|up_0|NC_014221.1_474401_475607_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	cas6|248aa|down_0|NC_014221.1_477308_478052_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|320aa|down_1|NC_014221.1_478074_479034_-	cd09626, DOMON_glucodextranase_like, DOMON-like domain of various glycoside hydrolases	NA|441aa|down_2|NC_014221.1_479035_480358_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|308aa|down_3|NC_014221.1_480350_481274_-	PRK05416, PRK05416, RNase adapter RapZ	NA|221aa|down_4|NC_014221.1_481323_481986_-	pfam05036, SPOR, Sporulation related domain	NA|218aa|down_5|NC_014221.1_482037_482691_-	cd01748, GATase1_IGP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS)	NA|200aa|down_6|NC_014221.1_482690_483290_-	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase	NA|364aa|down_7|NC_014221.1_483282_484374_-	PRK04870, PRK04870, histidinol-phosphate transaminase	NA|741aa|down_8|NC_014221.1_484464_486687_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|136aa|down_9|NC_014221.1_486807_487215_-	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism]
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	6	978176-978260	6	CRISPRCasFinder	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	AGCGGCCCCTGGGGTACACGGACG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA,NA	NA|453aa|up_9|NC_014221.1_966110_967469_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|462aa|up_8|NC_014221.1_967931_969317_+	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated	NA|280aa|up_7|NC_014221.1_969383_970223_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|248aa|up_6|NC_014221.1_970255_970999_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|275aa|up_5|NC_014221.1_970995_971820_-	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|47aa|up_4|NC_014221.1_971943_972084_-	PRK05928, hemD, uroporphyrinogen-III synthase; Reviewed	NA|615aa|up_3|NC_014221.1_972390_974235_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|225aa|up_2|NC_014221.1_974231_974906_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|381aa|up_1|NC_014221.1_975261_976404_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|480aa|up_0|NC_014221.1_976512_977952_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc	NA|379aa|down_0|NC_014221.1_978477_979614_+	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family	NA|283aa|down_1|NC_014221.1_979610_980459_+	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold	NA|236aa|down_2|NC_014221.1_980446_981154_+	COG0327, COG0327, Uncharacterized conserved protein [Function unknown]	NA|184aa|down_3|NC_014221.1_981213_981765_+	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|523aa|down_4|NC_014221.1_981787_983356_-	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|443aa|down_5|NC_014221.1_983380_984709_-	COG3314, COG3314, Uncharacterized protein conserved in bacteria [Function unknown]	NA|399aa|down_6|NC_014221.1_984733_985930_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|307aa|down_7|NC_014221.1_985922_986843_-	cd11589, Agmatinase_like_1, Agmatinase and related proteins	NA|555aa|down_8|NC_014221.1_986839_988504_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|248aa|down_9|NC_014221.1_988586_989330_+	COG1414, IclR, Transcriptional regulator [Transcription]
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	7	1805256-1807020	5,7,5	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csm6,cas4,cas1,cas2	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Type III-C,Type I-C,Type III-D,Type III-A,Type III-B,Type I-U	GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC,GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC,GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC	37,37,37	0	0	NA	NA	I-C:I-C:I-C	24,24,24	24	TypeIII-C,TypeI-C,TypeIII-D,TypeIII-A,TypeIII-B,TypeI-U	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA,NA|95aa|down_3|NC_014221.1_1810667_1810952_+	cas10|476aa|up_9|NC_014221.1_1795983_1797411_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|386aa|up_8|NC_014221.1_1797407_1798565_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|270aa|up_7|NC_014221.1_1798573_1799383_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|132aa|up_6|NC_014221.1_1799384_1799780_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|355aa|up_5|NC_014221.1_1799776_1800841_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	csx1|419aa|up_4|NC_014221.1_1800837_1802094_+	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csm6|348aa|up_3|NC_014221.1_1802090_1803134_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas4|215aa|up_2|NC_014221.1_1803096_1803741_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|344aa|up_1|NC_014221.1_1803737_1804769_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_014221.1_1804784_1805075_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|358aa|down_0|NC_014221.1_1807312_1808386_+	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|261aa|down_1|NC_014221.1_1808396_1809179_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|287aa|down_2|NC_014221.1_1809747_1810607_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|95aa|down_3|NC_014221.1_1810667_1810952_+	NA	NA|178aa|down_4|NC_014221.1_1811473_1812007_+	pfam01899, MNHE, Na+/H+ ion antiporter subunit	NA|97aa|down_5|NC_014221.1_1812003_1812294_+	PRK12599, PRK12599, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|107aa|down_6|NC_014221.1_1812290_1812611_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|89aa|down_7|NC_014221.1_1812598_1812865_+	pfam13244, DUF4040, Domain of unknown function (DUF4040)	NA|262aa|down_8|NC_014221.1_1812893_1813679_+	PRK12567, PRK12567, putative monovalent cation/H+ antiporter subunit B; Reviewed	NA|118aa|down_9|NC_014221.1_1813675_1814029_+	pfam00420, Oxidored_q2, NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	8	2406347-2407298	6,8,6	PILER-CR,CRISPRCasFinder,CRT	no	Cas14c_CAS-V-F	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Unclear	GTTACAAAAGGATCTGCCCCGTCAGGGGATTGAAAC,GTTTCAATCCCCTGACGGGGCAGATCCTTTTGCAAC,GTTTCAATCCCCTGACGGGGCAGATCCTTTTG	36,36,32	0	0	NA	NA	III-A:III-A:III-A	12,12,12	12	TypeV	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|181aa|up_5|NC_014221.1_2400066_2400609_-,NA|90aa|down_2|NC_014221.1_2414348_2414618_-,NA|161aa|down_9|NC_014221.1_2423035_2423518_+	NA|288aa|up_9|NC_014221.1_2394281_2395145_-	pfam02091, tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit	NA|735aa|up_8|NC_014221.1_2395414_2397619_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|449aa|up_7|NC_014221.1_2397696_2399043_+	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|325aa|up_6|NC_014221.1_2399108_2400083_+	COG4956, COG4956, Integral membrane protein (PIN domain superfamily) [General function prediction only]	NA|181aa|up_5|NC_014221.1_2400066_2400609_-	NA	Cas14c_CAS-V-F|400aa|up_4|NC_014221.1_2400611_2401811_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|172aa|up_3|NC_014221.1_2401834_2402350_-	pfam05704, Caps_synth, Capsular polysaccharide synthesis protein	NA|104aa|up_2|NC_014221.1_2402509_2402821_-	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|553aa|up_1|NC_014221.1_2403128_2404787_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|289aa|up_0|NC_014221.1_2404896_2405763_+	TIGR01475, ubiA_other, putative 4-hydroxybenzoate polyprenyltransferase	NA|1820aa|down_0|NC_014221.1_2407749_2413209_+	pfam18741, MTES_1575, REase_MTES_1575	NA|241aa|down_1|NC_014221.1_2413298_2414021_-	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|90aa|down_2|NC_014221.1_2414348_2414618_-	NA	NA|528aa|down_3|NC_014221.1_2414658_2416242_-	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like	NA|463aa|down_4|NC_014221.1_2417467_2418856_-	COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism]	NA|505aa|down_5|NC_014221.1_2419060_2420575_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|310aa|down_6|NC_014221.1_2420553_2421483_-	cd01144, BtuF, Cobalamin binding protein BtuF	NA|263aa|down_7|NC_014221.1_2421457_2422246_-	cd01144, BtuF, Cobalamin binding protein BtuF	NA|195aa|down_8|NC_014221.1_2422247_2422832_-	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|161aa|down_9|NC_014221.1_2423035_2423518_+	NA
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	9	2489905-2491460	7,9,7	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Unclear	CTTTTCCCCACACGCGTGGGGATGAACCG,CTTTTCCCCACACGCGTGGGGATGAACCG,CTTTTCCCCACACGCGTGGGGATGAACCG	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	24,25,25	25	Unclear	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA,NA	NA|444aa|up_9|NC_014221.1_2477923_2479255_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|151aa|up_8|NC_014221.1_2479348_2479801_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|346aa|up_7|NC_014221.1_2480084_2481122_+	cd01301, rDP_like, renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics	NA|330aa|up_6|NC_014221.1_2481269_2482259_+	cd02801, DUS_like_FMN, Dihydrouridine synthase-like (DUS-like) FMN-binding domain	NA|80aa|up_5|NC_014221.1_2482532_2482772_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|606aa|up_4|NC_014221.1_2483370_2485188_+	cd08500, PBP2_NikA_DppA_OppA_like_4, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|327aa|up_3|NC_014221.1_2485320_2486301_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|390aa|up_2|NC_014221.1_2486342_2487512_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|339aa|up_1|NC_014221.1_2487598_2488615_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|310aa|up_0|NC_014221.1_2488740_2489670_+	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional	NA|540aa|down_0|NC_014221.1_2491484_2493104_-	cd00578, L-fuc_L-ara-isomerases, L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins	NA|231aa|down_1|NC_014221.1_2493112_2493805_-	cd00956, Transaldolase_FSA, Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea	NA|324aa|down_2|NC_014221.1_2493801_2494773_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|510aa|down_3|NC_014221.1_2494769_2496299_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|318aa|down_4|NC_014221.1_2496360_2497314_-	cd20008, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate-binding protein such as CUT2	NA|434aa|down_5|NC_014221.1_2497617_2498919_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|497aa|down_6|NC_014221.1_2498972_2500463_-	cd13581, PBP2_AlgQ_like_2, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold	NA|289aa|down_7|NC_014221.1_2500690_2501557_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|315aa|down_8|NC_014221.1_2501583_2502528_-	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|57aa|down_9|NC_014221.1_2502678_2502849_+	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	10	2504070-2507589	8,10,8	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Type I-E	CTATTCCCCACACACGTGGGGATGAACCG,CGGTTCATCCCCACGTGTGTGGGGAATAG,CGGTTCATCCCCACGTGTGTGGGGAATAG	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	57,57,57	57	TypeI-E	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|114aa|up_1|NC_014221.1_2503097_2503439_-,NA|189aa|up_0|NC_014221.1_2503429_2503996_-,NA|63aa|down_7|NC_014221.1_2513571_2513760_-	NA|324aa|up_9|NC_014221.1_2493801_2494773_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|510aa|up_8|NC_014221.1_2494769_2496299_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|318aa|up_7|NC_014221.1_2496360_2497314_-	cd20008, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate-binding protein such as CUT2	NA|434aa|up_6|NC_014221.1_2497617_2498919_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|497aa|up_5|NC_014221.1_2498972_2500463_-	cd13581, PBP2_AlgQ_like_2, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold	NA|289aa|up_4|NC_014221.1_2500690_2501557_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|315aa|up_3|NC_014221.1_2501583_2502528_-	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|57aa|up_2|NC_014221.1_2502678_2502849_+	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL	NA|114aa|up_1|NC_014221.1_2503097_2503439_-	NA	NA|189aa|up_0|NC_014221.1_2503429_2503996_-	NA	cas2|104aa|down_0|NC_014221.1_2507699_2508011_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|321aa|down_1|NC_014221.1_2507964_2508927_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|211aa|down_2|NC_014221.1_2508930_2509563_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|231aa|down_3|NC_014221.1_2509537_2510230_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|394aa|down_4|NC_014221.1_2510231_2511413_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|197aa|down_5|NC_014221.1_2511406_2511997_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|513aa|down_6|NC_014221.1_2511980_2513519_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	NA|63aa|down_7|NC_014221.1_2513571_2513760_-	NA	cas3|897aa|down_8|NC_014221.1_2513984_2516675_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	WYL|327aa|down_9|NC_014221.1_2516700_2517681_-	pfam13280, WYL, WYL domain
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	11	2586446-2587550	9,11,9	PILER-CR,CRISPRCasFinder,CRT	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	GTTGCAAAAGGATCTGCCCCGTCAGGGGATTGAAAC,GTTTCAATCCCCTGACGGGGCAGATCCTTTTGCAAC,GTTTCAATCCCCTGACGGGGCAGATCCTTTTGCAAC	36,36,36	0	0	NA	NA	III-A:III-A:III-A	14,14,14	14	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|491aa|up_3|NC_014221.1_2582205_2583678_+,NA	NA|400aa|up_9|NC_014221.1_2574052_2575252_-	cd06334, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in transport of amino acids, peptides, or inorganic ions	NA|371aa|up_8|NC_014221.1_2575407_2576520_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|302aa|up_7|NC_014221.1_2576630_2577536_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|657aa|up_6|NC_014221.1_2577532_2579503_-	cd17641, LC_FACS_bac1, bacterial long-chain fatty acid CoA synthetase	NA|263aa|up_5|NC_014221.1_2579493_2580282_-	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|392aa|up_4|NC_014221.1_2580707_2581883_-	pfam14397, ATPgrasp_ST, Sugar-transfer associated ATP-grasp	NA|491aa|up_3|NC_014221.1_2582205_2583678_+	NA	NA|282aa|up_2|NC_014221.1_2583726_2584572_+	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	NA|394aa|up_1|NC_014221.1_2584573_2585755_-	TIGR01814, kynureninase, kynureninase	NA|202aa|up_0|NC_014221.1_2585761_2586367_-	TIGR03035, trp_arylform, arylformamidase	NA|449aa|down_0|NC_014221.1_2587891_2589238_-	PRK14323, glmM, phosphoglucosamine mutase; Provisional	NA|836aa|down_1|NC_014221.1_2589315_2591823_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|495aa|down_2|NC_014221.1_2592273_2593758_+	PRK10565, PRK10565, putative carbohydrate kinase; Provisional	NA|308aa|down_3|NC_014221.1_2593784_2594708_+	PRK01212, PRK01212, homoserine kinase; Provisional	NA|176aa|down_4|NC_014221.1_2594734_2595262_-	pfam06695, Sm_multidrug_ex, Putative small multi-drug export protein	NA|398aa|down_5|NC_014221.1_2595556_2596750_-	pfam05673, DUF815, Protein of unknown function (DUF815)	NA|523aa|down_6|NC_014221.1_2596819_2598388_+	PRK14963, PRK14963, DNA polymerase III subunits gamma and tau; Provisional	NA|136aa|down_7|NC_014221.1_2598531_2598939_+	PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional	NA|107aa|down_8|NC_014221.1_2599030_2599351_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|197aa|down_9|NC_014221.1_2599424_2600015_+	PRK00076, recR, recombination protein RecR; Reviewed
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	12	2755732-2755842	12	CRISPRCasFinder	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	GAGGTCAGCGCCTCCGGGCGCCCCGGC	27	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA|55aa|up_6|NC_014221.1_2752179_2752344_+,NA|100aa|up_5|NC_014221.1_2752410_2752710_-,NA|50aa|up_4|NC_014221.1_2752879_2753029_+,NA|82aa|up_2|NC_014221.1_2753975_2754221_-,NA|120aa|down_0|NC_014221.1_2757138_2757498_+,NA|122aa|down_3|NC_014221.1_2759444_2759810_+,NA|107aa|down_5|NC_014221.1_2761274_2761595_-,NA|66aa|down_7|NC_014221.1_2762257_2762455_+	NA|281aa|up_9|NC_014221.1_2746062_2746905_+	COG0685, MetF, 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism]	NA|1236aa|up_8|NC_014221.1_2746901_2750609_+	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|418aa|up_7|NC_014221.1_2750598_2751852_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|55aa|up_6|NC_014221.1_2752179_2752344_+	NA	NA|100aa|up_5|NC_014221.1_2752410_2752710_-	NA	NA|50aa|up_4|NC_014221.1_2752879_2753029_+	NA	NA|200aa|up_3|NC_014221.1_2753006_2753606_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|82aa|up_2|NC_014221.1_2753975_2754221_-	NA	NA|129aa|up_1|NC_014221.1_2754217_2754604_-	pfam17648, DUF5519, Family of unknown function (DUF5519)	NA|365aa|up_0|NC_014221.1_2754600_2755695_-	COG0809, QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Translation, ribosomal structure and biogenesis]	NA|120aa|down_0|NC_014221.1_2757138_2757498_+	NA	NA|329aa|down_1|NC_014221.1_2757584_2758571_+	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR)	NA|224aa|down_2|NC_014221.1_2758577_2759249_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|122aa|down_3|NC_014221.1_2759444_2759810_+	NA	NA|399aa|down_4|NC_014221.1_2759931_2761128_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|107aa|down_5|NC_014221.1_2761274_2761595_-	NA	NA|173aa|down_6|NC_014221.1_2761761_2762280_+	pfam11497, NADH_Oxid_Nqo15, NADH-quinone oxidoreductase chain 15	NA|66aa|down_7|NC_014221.1_2762257_2762455_+	NA	NA|144aa|down_8|NC_014221.1_2762545_2762977_+	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues	NA|625aa|down_9|NC_014221.1_2764206_2766081_+	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein
GCF_000092425.1_ASM9242v1	NC_014221	Truepera radiovictrix DSM 17093, complete sequence	13	3159420-3159522	13	CRISPRCasFinder	no		csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	Orphan	GCTACAGGCCACGCGCCACACGCCT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14c_CAS-V-F,DEDDh,cas2,cas1,csx1,cas6,c2c9_V-U4,DinG,cas14j,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,Cas9_archaeal,cas3,cas5,cas8c,cas7,csm6,cas4,cas6e,cse2gr11,cas8e,WYL	NA,NA|101aa|down_3|NC_014221.1_3162932_3163235_-	NA|338aa|up_9|NC_014221.1_3145967_3146981_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|438aa|up_8|NC_014221.1_3147240_3148554_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|305aa|up_7|NC_014221.1_3148670_3149585_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|254aa|up_6|NC_014221.1_3149650_3150412_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|340aa|up_5|NC_014221.1_3150408_3151428_+	cd08234, threonine_DH_like, L-threonine dehydrogenase	NA|343aa|up_4|NC_014221.1_3151446_3152475_+	cd05285, sorbitol_DH, Sorbitol dehydrogenase	NA|387aa|up_3|NC_014221.1_3152642_3153803_+	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins	NA|271aa|up_2|NC_014221.1_3153884_3154697_+	pfam02585, PIG-L, GlcNAc-PI de-N-acetylase	NA|1034aa|up_1|NC_014221.1_3154797_3157899_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|469aa|up_0|NC_014221.1_3157958_3159365_+	sd00006, TPR, Tetratricopeptide repeat	NA|148aa|down_0|NC_014221.1_3159613_3160057_+	pfam14196, ATC_hydrolase, L-2-amino-thiazoline-4-carboxylic acid hydrolase	NA|526aa|down_1|NC_014221.1_3160085_3161663_+	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]	NA|400aa|down_2|NC_014221.1_3161710_3162910_+	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters	NA|101aa|down_3|NC_014221.1_3162932_3163235_-	NA	NA|120aa|down_4|NC_014221.1_3163244_3163604_-	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|242aa|down_5|NC_014221.1_3163772_3164498_+	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|221aa|down_6|NC_014221.1_3164639_3165302_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|461aa|down_7|NC_014221.1_3165531_3166914_+	PLN02852, PLN02852, ferredoxin-NADP+ reductase	NA|252aa|down_8|NC_014221.1_3167061_3167817_+	cd14965, 7tm_Opsins_type1, type 1 opsins, member of the seven-transmembrane GPCR superfamily	NA|144aa|down_9|NC_014221.1_3167923_3168355_+	COG3258, COG3258, Cytochrome c [Energy production and conversion]
