assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	1	1046093-1046380	1	CRISPRCasFinder	no		DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Orphan	TGAACATTAACATGAGATGTATTTAAAT	28	0	0	NA	NA	III-B	4	4	Orphan	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|51aa|up_0|NC_017297.1_1045878_1046031_-,NA|61aa|down_8|NC_017297.1_1057261_1057444_+	NA|536aa|up_9|NC_017297.1_1033269_1034877_+	pfam13520, AA_permease_2, Amino acid permease	NA|787aa|up_8|NC_017297.1_1035240_1037601_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|224aa|up_7|NC_017297.1_1037760_1038432_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|344aa|up_6|NC_017297.1_1038428_1039460_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|183aa|up_5|NC_017297.1_1039811_1040360_+	pfam02632, BioY, BioY family	NA|569aa|up_4|NC_017297.1_1040764_1042471_+	sd00010, SLR, Sel1-like repeat	NA|182aa|up_3|NC_017297.1_1042813_1043359_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|532aa|up_2|NC_017297.1_1043438_1045034_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|186aa|up_1|NC_017297.1_1045312_1045870_+	PRK05800, cobU, adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated	NA|51aa|up_0|NC_017297.1_1045878_1046031_-	NA	NA|255aa|down_0|NC_017297.1_1046491_1047256_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|321aa|down_1|NC_017297.1_1049445_1050408_+	PRK01209, cobD, cobalamin biosynthesis protein	NA|363aa|down_2|NC_017297.1_1050626_1051715_+	PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional	NA|240aa|down_3|NC_017297.1_1051898_1052618_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|100aa|down_4|NC_017297.1_1052621_1052921_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|233aa|down_5|NC_017297.1_1052883_1053582_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|221aa|down_6|NC_017297.1_1054014_1054677_+	PRK05562, PRK05562, NAD(P)-dependent oxidoreductase	NA|291aa|down_7|NC_017297.1_1054645_1055518_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|61aa|down_8|NC_017297.1_1057261_1057444_+	NA	NA|325aa|down_9|NC_017297.1_1057705_1058680_+	PRK09283, PRK09283, porphobilinogen synthase
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	2	1109484-1109576	2	CRISPRCasFinder	no		DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Orphan	GTTGAACATTAACATGAGATGTATTT	26	0	0	NA	NA	III-B	1	1	Orphan	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA,NA|101aa|down_2|NC_017297.1_1116671_1116974_-	NA|587aa|up_9|NC_017297.1_1099634_1101395_-	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional	NA|377aa|up_8|NC_017297.1_1101405_1102536_-	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|346aa|up_7|NC_017297.1_1102852_1103890_-	pfam10114, PocR, Sensory domain found in PocR	NA|155aa|up_6|NC_017297.1_1104231_1104696_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|148aa|up_5|NC_017297.1_1104797_1105241_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|198aa|up_4|NC_017297.1_1105393_1105987_+	pfam07081, DUF1349, Protein of unknown function (DUF1349)	NA|67aa|up_3|NC_017297.1_1106050_1106251_+	pfam12663, DUF3788, Protein of unknown function (DUF3788)	NA|282aa|up_2|NC_017297.1_1106372_1107218_+	cd19157, AKR_AKR5G1-3, AKR5G family of aldo-keto reductase (AKR)	NA|108aa|up_1|NC_017297.1_1107318_1107642_+	COG3070, TfoX, Regulator of competence-specific genes [Transcription]	NA|285aa|up_0|NC_017297.1_1107687_1108542_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|723aa|down_0|NC_017297.1_1111843_1114012_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|720aa|down_1|NC_017297.1_1114038_1116198_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|101aa|down_2|NC_017297.1_1116671_1116974_-	NA	NA|252aa|down_3|NC_017297.1_1117179_1117935_+	pfam13803, DUF4184, Domain of unknown function (DUF4184)	NA|710aa|down_4|NC_017297.1_1118202_1120332_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|144aa|down_5|NC_017297.1_1120503_1120935_+	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain	NA|182aa|down_6|NC_017297.1_1121216_1121762_-	PRK09453, PRK09453, phosphodiesterase; Provisional	NA|128aa|down_7|NC_017297.1_1122398_1122782_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|825aa|down_8|NC_017297.1_1122896_1125371_+	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|72aa|down_9|NC_017297.1_1125818_1126034_+	pfam11211, DUF2997, Protein of unknown function (DUF2997)
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	3	1903423-1903640	3	CRISPRCasFinder	no	cas3	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Unclear	ATAATAATATAAAAGATATATCT	23	0	0	NA	NA	NA	3	3	Unclear	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA,NA|61aa|down_0|NC_017297.1_1908998_1909181_+,NA|71aa|down_7|NC_017297.1_1914347_1914560_-,NA|158aa|down_8|NC_017297.1_1916047_1916521_-	NA|70aa|up_9|NC_017297.1_1885618_1885828_+	pfam00313, CSD, 'Cold-shock' DNA-binding domain	NA|668aa|up_8|NC_017297.1_1886196_1888200_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|527aa|up_7|NC_017297.1_1888480_1890061_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|153aa|up_6|NC_017297.1_1890382_1890841_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|285aa|up_5|NC_017297.1_1891411_1892266_+	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|298aa|up_4|NC_017297.1_1892466_1893360_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|422aa|up_3|NC_017297.1_1893728_1894994_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|279aa|up_2|NC_017297.1_1895316_1896153_+	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only]	cas3|482aa|up_1|NC_017297.1_1896331_1897777_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|1486aa|up_0|NC_017297.1_1897933_1902391_+	pfam16472, DUF5050, Domain of unknown function (DUF5050)	NA|61aa|down_0|NC_017297.1_1908998_1909181_+	NA	NA|285aa|down_1|NC_017297.1_1909241_1910096_+	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY	NA|154aa|down_2|NC_017297.1_1910095_1910557_+	COG1406, COG1406, Predicted inhibitor of MCP methylation, homolog of CheC [Cell motility and secretion]	NA|453aa|down_3|NC_017297.1_1910739_1912098_-	COG3314, COG3314, Uncharacterized protein conserved in bacteria [Function unknown]	NA|68aa|down_4|NC_017297.1_1912836_1913040_+	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type	NA|67aa|down_5|NC_017297.1_1913100_1913301_+	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type	NA|110aa|down_6|NC_017297.1_1913500_1913830_-	TIGR01911, conserved_protein, HesB-like selenoprotein	NA|71aa|down_7|NC_017297.1_1914347_1914560_-	NA	NA|158aa|down_8|NC_017297.1_1916047_1916521_-	NA	NA|202aa|down_9|NC_017297.1_1916818_1917424_+	PRK00215, PRK00215, transcriptional repressor LexA
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	4	2351786-2351882	4	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C	ATTTAAATACATCTTATGTTACTGTTCAAC	30	0	0	NA	NA	III-B	1	1	TypeIII-C	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_1|NC_017297.1_2349825_2350230_-,NA|165aa|down_0|NC_017297.1_2353170_2353665_-,NA|50aa|down_5|NC_017297.1_2360525_2360675_+,NA|98aa|down_7|NC_017297.1_2364417_2364711_-	NA|286aa|up_9|NC_017297.1_2337558_2338416_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|667aa|up_8|NC_017297.1_2340204_2342205_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NC_017297.1_2342185_2342953_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NC_017297.1_2343740_2344094_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|455aa|up_5|NC_017297.1_2346724_2348089_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|97aa|up_4|NC_017297.1_2348094_2348385_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_3|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_2|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_1|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_0|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|down_0|NC_017297.1_2353170_2353665_-	NA	NA|205aa|down_1|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|down_2|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_3|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|down_4|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|50aa|down_5|NC_017297.1_2360525_2360675_+	NA	NA|266aa|down_6|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_7|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_8|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_9|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	5	2352134-2352426	5	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C, Type III-C?,Type III-D,Type III-A,Type III-B	ATTTAAATACATCTTATGTTACTGTTCAAC	30	0	0	NA	NA	III-B	4	4	TypeIII-C,TypeIII-D,TypeIII-C?,TypeIII-A,TypeIII-B	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_1|NC_017297.1_2349825_2350230_-,NA|165aa|down_0|NC_017297.1_2353170_2353665_-,NA|50aa|down_5|NC_017297.1_2360525_2360675_+,NA|98aa|down_7|NC_017297.1_2364417_2364711_-	NA|286aa|up_9|NC_017297.1_2337558_2338416_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|667aa|up_8|NC_017297.1_2340204_2342205_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NC_017297.1_2342185_2342953_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NC_017297.1_2343740_2344094_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|455aa|up_5|NC_017297.1_2346724_2348089_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|97aa|up_4|NC_017297.1_2348094_2348385_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_3|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_2|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_1|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_0|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|down_0|NC_017297.1_2353170_2353665_-	NA	NA|205aa|down_1|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|down_2|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_3|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|down_4|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|50aa|down_5|NC_017297.1_2360525_2360675_+	NA	NA|266aa|down_6|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_7|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_8|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_9|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	6	2352681-2352908	6,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C, Type III-C?,Type III-D,Type III-A,Type III-B	ATTTAAATACATCTTATGTTACTGTTCAAC,ATTTAAATACATCTTATGTTACTGTTCAAC,ATTTAAATACATCTTATGTTACTGTTCAAC	30,30,30	0	0	NA	NA	III-B:III-B:III-B	3,3,3	3	TypeIII-C,TypeIII-D,TypeIII-C?,TypeIII-A,TypeIII-B	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_1|NC_017297.1_2349825_2350230_-,NA|165aa|down_0|NC_017297.1_2353170_2353665_-,NA|50aa|down_5|NC_017297.1_2360525_2360675_+,NA|98aa|down_7|NC_017297.1_2364417_2364711_-	NA|286aa|up_9|NC_017297.1_2337558_2338416_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|667aa|up_8|NC_017297.1_2340204_2342205_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NC_017297.1_2342185_2342953_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NC_017297.1_2343740_2344094_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|455aa|up_5|NC_017297.1_2346724_2348089_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|97aa|up_4|NC_017297.1_2348094_2348385_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_3|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_2|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_1|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_0|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|down_0|NC_017297.1_2353170_2353665_-	NA	NA|205aa|down_1|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|down_2|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_3|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|down_4|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|50aa|down_5|NC_017297.1_2360525_2360675_+	NA	NA|266aa|down_6|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_7|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_8|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_9|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	7	2359490-2359780	2,7,2	CRT,CRISPRCasFinder,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	ATTTAAATACATCTTATGTTATTGTTCAAC,TTAAATACATCTTATGTTAATGTTCAAC,TAATTTAAATACATCTTATGTTATTGTTCAAC	30,28,32	0	0	NA	NA	III-B:III-B:III-B	4,4,3	4	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_6|NC_017297.1_2349825_2350230_-,NA|165aa|up_4|NC_017297.1_2353170_2353665_-,NA|50aa|down_0|NC_017297.1_2360525_2360675_+,NA|98aa|down_2|NC_017297.1_2364417_2364711_-,csx1|424aa|down_6|NC_017297.1_2367791_2369063_-	NA|97aa|up_9|NC_017297.1_2348094_2348385_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_8|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_7|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_6|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_5|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|up_4|NC_017297.1_2353170_2353665_-	NA	NA|205aa|up_3|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|up_2|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_1|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|up_0|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|50aa|down_0|NC_017297.1_2360525_2360675_+	NA	NA|266aa|down_1|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_2|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_3|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_4|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|288aa|down_5|NC_017297.1_2366914_2367778_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|424aa|down_6|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|down_7|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|down_8|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|down_9|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	8	2360034-2360193	8	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	TTAAATACATCTTATGTTAATGTTCAAC	28	0	0	NA	NA	III-B	2	2	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_6|NC_017297.1_2349825_2350230_-,NA|165aa|up_4|NC_017297.1_2353170_2353665_-,NA|50aa|down_0|NC_017297.1_2360525_2360675_+,NA|98aa|down_2|NC_017297.1_2364417_2364711_-,csx1|424aa|down_6|NC_017297.1_2367791_2369063_-	NA|97aa|up_9|NC_017297.1_2348094_2348385_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_8|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_7|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_6|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_5|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|up_4|NC_017297.1_2353170_2353665_-	NA	NA|205aa|up_3|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|up_2|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_1|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|up_0|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|50aa|down_0|NC_017297.1_2360525_2360675_+	NA	NA|266aa|down_1|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_2|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_3|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_4|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|288aa|down_5|NC_017297.1_2366914_2367778_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|424aa|down_6|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|down_7|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|down_8|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|down_9|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	9	2360473-2360766	3,3,9	CRT,PILER-CR,CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	ATTTAAATACATCTTATGTTAATGTTCAAC,ATTTAAATACATCTTATGTTAATGTTCAAC,TTAAATACATCTTATGTTAATGTTCAAC	30,30,28	0	0	NA	NA	III-B:III-B:III-B	4,3,4	4	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_6|NC_017297.1_2349825_2350230_-,NA|165aa|up_4|NC_017297.1_2353170_2353665_-,NA|98aa|down_1|NC_017297.1_2364417_2364711_-,csx1|424aa|down_5|NC_017297.1_2367791_2369063_-	NA|97aa|up_9|NC_017297.1_2348094_2348385_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_8|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_7|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_6|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_5|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|up_4|NC_017297.1_2353170_2353665_-	NA	NA|205aa|up_3|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|up_2|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_1|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|up_0|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|266aa|down_0|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_1|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_2|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_3|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|288aa|down_4|NC_017297.1_2366914_2367778_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|424aa|down_5|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|down_6|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|down_7|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|down_8|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1	cas6|230aa|down_9|NC_017297.1_2373124_2373814_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	10	2361041-2361200	10	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	TTAAATACATCTTATGTTAATGTTCAAC	28	0	0	NA	NA	III-B	2	2	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|135aa|up_7|NC_017297.1_2349825_2350230_-,NA|165aa|up_5|NC_017297.1_2353170_2353665_-,NA|50aa|up_0|NC_017297.1_2360525_2360675_+,NA|98aa|down_1|NC_017297.1_2364417_2364711_-,csx1|424aa|down_5|NC_017297.1_2367791_2369063_-	NA|146aa|up_9|NC_017297.1_2348413_2348851_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_8|NC_017297.1_2348874_2349591_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|135aa|up_7|NC_017297.1_2349825_2350230_-	NA	NA|245aa|up_6|NC_017297.1_2350567_2351302_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|165aa|up_5|NC_017297.1_2353170_2353665_-	NA	NA|205aa|up_4|NC_017297.1_2353707_2354322_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|464aa|up_3|NC_017297.1_2355312_2356704_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_2|NC_017297.1_2356807_2357548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|174aa|up_1|NC_017297.1_2358746_2359268_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|50aa|up_0|NC_017297.1_2360525_2360675_+	NA	NA|266aa|down_0|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_1|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|down_2|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|down_3|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|288aa|down_4|NC_017297.1_2366914_2367778_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|424aa|down_5|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|down_6|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|down_7|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|down_8|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1	cas6|230aa|down_9|NC_017297.1_2373124_2373814_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	11	2374002-2374313	11	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	ATTTAAATACATCTCATGTTAATGTT	26	0	0	NA	NA	III-B	4	4	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|98aa|up_8|NC_017297.1_2364417_2364711_-,csx1|424aa|up_4|NC_017297.1_2367791_2369063_-,NA|74aa|down_4|NC_017297.1_2382320_2382542_-,NA|300aa|down_5|NC_017297.1_2385349_2386249_+	NA|266aa|up_9|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|up_8|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|up_7|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|up_6|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|288aa|up_5|NC_017297.1_2366914_2367778_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|424aa|up_4|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|up_3|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|up_2|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|up_1|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1	cas6|230aa|up_0|NC_017297.1_2373124_2373814_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|283aa|down_0|NC_017297.1_2376882_2377731_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|307aa|down_1|NC_017297.1_2378021_2378942_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|down_2|NC_017297.1_2379266_2380760_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|122aa|down_3|NC_017297.1_2381831_2382197_-	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|74aa|down_4|NC_017297.1_2382320_2382542_-	NA	NA|300aa|down_5|NC_017297.1_2385349_2386249_+	NA	NA|441aa|down_6|NC_017297.1_2386588_2387911_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|245aa|down_7|NC_017297.1_2387978_2388713_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|258aa|down_8|NC_017297.1_2389215_2389989_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|522aa|down_9|NC_017297.1_2390082_2391648_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	12	2376525-2376617	12	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	TTAAATACATCTTATGTTAATGTTCAA	27	0	0	NA	NA	III-B	1	1	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|98aa|up_8|NC_017297.1_2364417_2364711_-,csx1|424aa|up_4|NC_017297.1_2367791_2369063_-,NA|74aa|down_4|NC_017297.1_2382320_2382542_-,NA|300aa|down_5|NC_017297.1_2385349_2386249_+	NA|266aa|up_9|NC_017297.1_2363571_2364369_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|up_8|NC_017297.1_2364417_2364711_-	NA	cmr6gr7|433aa|up_7|NC_017297.1_2365144_2366443_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|160aa|up_6|NC_017297.1_2366435_2366915_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|288aa|up_5|NC_017297.1_2366914_2367778_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|424aa|up_4|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|up_3|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|up_2|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|up_1|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1	cas6|230aa|up_0|NC_017297.1_2373124_2373814_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|283aa|down_0|NC_017297.1_2376882_2377731_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|307aa|down_1|NC_017297.1_2378021_2378942_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|down_2|NC_017297.1_2379266_2380760_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|122aa|down_3|NC_017297.1_2381831_2382197_-	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|74aa|down_4|NC_017297.1_2382320_2382542_-	NA	NA|300aa|down_5|NC_017297.1_2385349_2386249_+	NA	NA|441aa|down_6|NC_017297.1_2386588_2387911_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|245aa|down_7|NC_017297.1_2387978_2388713_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|258aa|down_8|NC_017297.1_2389215_2389989_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|522aa|down_9|NC_017297.1_2390082_2391648_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	13	2382754-2382851	13	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Type III-C,Type III-D,Type III-B,Type III-A	CAAATTTAAATACATCTTATGTTAATGTTCAAC	33	0	0	NA	NA	III-B	1	1	TypeIII-C,TypeIII-D,TypeIII-B,TypeIII-A	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	csx1|424aa|up_9|NC_017297.1_2367791_2369063_-,NA|74aa|up_0|NC_017297.1_2382320_2382542_-,NA|300aa|down_0|NC_017297.1_2385349_2386249_+	csx1|424aa|up_9|NC_017297.1_2367791_2369063_-	NA	cmr3gr5|368aa|up_8|NC_017297.1_2369065_2370169_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|up_7|NC_017297.1_2370149_2371895_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|394aa|up_6|NC_017297.1_2371897_2373079_-	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1	cas6|230aa|up_5|NC_017297.1_2373124_2373814_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|283aa|up_4|NC_017297.1_2376882_2377731_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|307aa|up_3|NC_017297.1_2378021_2378942_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|up_2|NC_017297.1_2379266_2380760_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|122aa|up_1|NC_017297.1_2381831_2382197_-	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|74aa|up_0|NC_017297.1_2382320_2382542_-	NA	NA|300aa|down_0|NC_017297.1_2385349_2386249_+	NA	NA|441aa|down_1|NC_017297.1_2386588_2387911_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|245aa|down_2|NC_017297.1_2387978_2388713_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|258aa|down_3|NC_017297.1_2389215_2389989_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|522aa|down_4|NC_017297.1_2390082_2391648_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]	NA|350aa|down_5|NC_017297.1_2391947_2392997_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|262aa|down_6|NC_017297.1_2393015_2393801_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|378aa|down_7|NC_017297.1_2393839_2394973_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|376aa|down_8|NC_017297.1_2395470_2396598_-	pfam06050, HGD-D, 2-hydroxyglutaryl-CoA dehydratase, D-component	NA|411aa|down_9|NC_017297.1_2396597_2397830_-	pfam06050, HGD-D, 2-hydroxyglutaryl-CoA dehydratase, D-component
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	14	2476163-2476408	4	CRT	no	casR,DEDDh	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Unclear	TCTTCTTTCGCANTCTCT	18	3	3	2476181-2476210|2476229-2476258|2476313-2476330	NC_017297.1_2476157-2476186|NC_017297.1_2476157-2476186|NC_017297.1_2198240-2198257	NA	5	5	Unclear	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|83aa|up_5|NC_017297.1_2472357_2472606_-,NA|36aa|up_1|NC_017297.1_2474972_2475080_-,NA|33aa|down_0|NC_017297.1_2476663_2476762_-,NA|68aa|down_1|NC_017297.1_2476819_2477023_-,NA|136aa|down_6|NC_017297.1_2480050_2480458_-,NA|198aa|down_7|NC_017297.1_2480538_2481132_-	NA|110aa|up_9|NC_017297.1_2466983_2467313_-	PRK09272, PRK09272, hypothetical protein; Provisional	casR|143aa|up_8|NC_017297.1_2467300_2467729_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|199aa|up_7|NC_017297.1_2467870_2468467_-	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862)	NA|598aa|up_6|NC_017297.1_2468644_2470438_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|83aa|up_5|NC_017297.1_2472357_2472606_-	NA	NA|90aa|up_4|NC_017297.1_2472926_2473196_-	pfam07659, DUF1599, Domain of Unknown Function (DUF1599)	NA|113aa|up_3|NC_017297.1_2473391_2473730_+	pfam12788, YmaF, YmaF family	NA|334aa|up_2|NC_017297.1_2473894_2474896_-	COG4927, COG4927, Predicted choloylglycine hydrolase [General function prediction only]	NA|36aa|up_1|NC_017297.1_2474972_2475080_-	NA	NA|194aa|up_0|NC_017297.1_2475093_2475675_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|33aa|down_0|NC_017297.1_2476663_2476762_-	NA	NA|68aa|down_1|NC_017297.1_2476819_2477023_-	NA	NA|111aa|down_2|NC_017297.1_2477834_2478167_+	pfam12788, YmaF, YmaF family	NA|76aa|down_3|NC_017297.1_2478505_2478733_+	PRK05802, PRK05802, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA|253aa|down_4|NC_017297.1_2478729_2479488_+	PRK05802, PRK05802, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA|56aa|down_5|NC_017297.1_2479582_2479750_-	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein	NA|136aa|down_6|NC_017297.1_2480050_2480458_-	NA	NA|198aa|down_7|NC_017297.1_2480538_2481132_-	NA	NA|150aa|down_8|NC_017297.1_2481304_2481754_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|199aa|down_9|NC_017297.1_2481985_2482582_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]
GCF_000092345.1_ASM9234v1	NC_017297	Clostridium botulinum F str. 230613, complete genome	15	3875654-3875767	14	CRISPRCasFinder	no	cas3	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	Unclear	AGGACTTGAACCTACGACACTTCGGGT	27	0	0	NA	NA	NA	1	1	Unclear	DEDDh,csa3,DinG,c2c9_V-U4,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3HD	NA|276aa|up_7|NC_017297.1_3864287_3865115_-,NA	NA|505aa|up_9|NC_017297.1_3862141_3863656_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|161aa|up_8|NC_017297.1_3863674_3864157_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|276aa|up_7|NC_017297.1_3864287_3865115_-	NA	NA|324aa|up_6|NC_017297.1_3865164_3866136_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|259aa|up_5|NC_017297.1_3866145_3866922_-	PRK13318, PRK13318, type III pantothenate kinase	NA|558aa|up_4|NC_017297.1_3867076_3868750_-	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	NA|602aa|up_3|NC_017297.1_3868952_3870758_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|182aa|up_2|NC_017297.1_3870839_3871385_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|469aa|up_1|NC_017297.1_3871368_3872775_-	TIGR02432, tRNAIle-lysidine_synthase, tRNA(Ile)-lysidine synthetase, N-terminal domain	NA|796aa|up_0|NC_017297.1_3872923_3875311_-	TIGR02865, Stage_II_sporulation_protein_E, stage II sporulation protein E	NA|135aa|down_0|NC_017297.1_3876166_3876571_-	PRK05807, PRK05807, RNA-binding protein S1	NA|90aa|down_1|NC_017297.1_3876632_3876902_-	pfam04977, DivIC, Septum formation initiator	NA|133aa|down_2|NC_017297.1_3876996_3877395_-	TIGR02893, Spore_protein_YabQ, spore cortex biosynthesis protein YabQ	NA|97aa|down_3|NC_017297.1_3877410_3877701_-	TIGR02892, conserved_hypothetical_protein, sporulation protein YabP	NA|80aa|down_4|NC_017297.1_3877820_3878060_-	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|93aa|down_5|NC_017297.1_3878133_3878412_-	cd13831, HU, histone-like DNA-binding protein HU	NA|482aa|down_6|NC_017297.1_3878539_3879985_-	COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]	NA|512aa|down_7|NC_017297.1_3879999_3881535_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|184aa|down_8|NC_017297.1_3881667_3882219_-	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T	NA|337aa|down_9|NC_017297.1_3882417_3883428_-	PRK00059, prsA, peptidylprolyl isomerase; Provisional
